RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SLIT2O94813 1529 aa10.27□□□□□ -0.77
TOPBP1-207ENST00000509162 RGL2O15211 777 aa10.26□□□□□ -0.77
TOPBP1-207ENST00000509162 LRRC59Q96AG4 307 aaKnown RBP10.26□□□□□ -0.77
TOPBP1-207ENST00000509162 TAOK2Q9UL54 1235 aa10.26□□□□□ -0.77
TOPBP1-207ENST00000509162 NFAT5O94916 1531 aa10.26□□□□□ -0.77
TOPBP1-207ENST00000509162 GLI3P10071 1580 aa10.26□□□□□ -0.77
TOPBP1-207ENST00000509162 BCL9LQ86UU0 1499 aa10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 NUTM2BA6NNL0 878 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 NUTM2EB1AL46 878 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 TIE1P35590 1138 aa10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 NUTM2AQ8IVF1 878 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 CABLES1Q8TDN4 633 aa10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 USP19O94966 1318 aa10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 A0A1W2PP64 1363 aa10.25□□□□□ -0.77
TOPBP1-207ENST00000509162 SRPK2P78362 688 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 SLC39A7Q92504 469 aa10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 CABP1Q9NZU7 370 aa10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 EVC2Q86UK5 1308 aa10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 ARHGEF10O15013 1369 aa10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 RGS12O14924 1447 aa10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 ATRNO75882 1429 aa10.24□□□□□ -0.77
TOPBP1-207ENST00000509162 EP400Q96L91 3159 aa10.23□□□□□ -0.77
TOPBP1-207ENST00000509162 DCAF8Q5TAQ9 597 aa10.23□□□□□ -0.77
TOPBP1-207ENST00000509162 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
TOPBP1-207ENST00000509162 NWD2Q9ULI1 1742 aa10.23□□□□□ -0.77
TOPBP1-207ENST00000509162 AFF2P51816 1311 aa10.23□□□□□ -0.77
TOPBP1-207ENST00000509162 COL18A1P39060 1754 aa10.23□□□□□ -0.77
TOPBP1-207ENST00000509162 COL14A1Q05707 1796 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-207ENST00000509162 ADAMTS2O95450 1211 aa10.22□□□□□ -0.77
TOPBP1-207ENST00000509162 C7P10643 843 aa10.22□□□□□ -0.77
TOPBP1-207ENST00000509162 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
TOPBP1-207ENST00000509162 BMP2KQ9NSY1 1161 aaPredicted RBP10.22□□□□□ -0.77
TOPBP1-207ENST00000509162 OVOS2A0A0J9YW53 1432 aa10.22□□□□□ -0.77
TOPBP1-207ENST00000509162 OVOS2Q6IE36 1432 aa10.22□□□□□ -0.77
TOPBP1-207ENST00000509162 HSPA5P11021 654 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-207ENST00000509162 PAXIP1Q6ZW49 1069 aaPredicted RBP10.21□□□□□ -0.77
TOPBP1-207ENST00000509162 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-207ENST00000509162 C11orf95C9JLR9 678 aaPredicted RBP10.2□□□□□ -0.78
TOPBP1-207ENST00000509162 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
TOPBP1-207ENST00000509162 GSE1Q14687 1217 aa10.2□□□□□ -0.78
TOPBP1-207ENST00000509162 NUTM2GQ5VZR2 741 aa10.2□□□□□ -0.78
TOPBP1-207ENST00000509162 C8orf37Q96NL8 207 aa10.2□□□□□ -0.78
TOPBP1-207ENST00000509162 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
TOPBP1-207ENST00000509162 CAMTA1Q9Y6Y1 1673 aa10.19□□□□□ -0.78
TOPBP1-207ENST00000509162 TTC21BQ7Z4L5 1316 aa10.19□□□□□ -0.78
TOPBP1-207ENST00000509162 PSME1Q06323 249 aa10.19□□□□□ -0.78
TOPBP1-207ENST00000509162 SLC12A5Q9H2X9 1139 aa10.19□□□□□ -0.78
TOPBP1-207ENST00000509162 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
TOPBP1-207ENST00000509162 KIF20BQ96Q89 1820 aa10.19□□□□□ -0.78
TOPBP1-207ENST00000509162 THSD7AQ9UPZ6 1657 aa10.18□□□□□ -0.78
TOPBP1-207ENST00000509162 EDC4Q6P2E9 1401 aaKnown RBP10.18□□□□□ -0.78
TOPBP1-207ENST00000509162 ANKRD36BQ8N2N9 1353 aa10.18□□□□□ -0.78
TOPBP1-207ENST00000509162 KIAA0232Q92628 1395 aa10.18□□□□□ -0.78
TOPBP1-207ENST00000509162 FNBP4Q8N3X1 1017 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-207ENST00000509162 WNK3Q9BYP7 1800 aa10.18□□□□□ -0.78
TOPBP1-207ENST00000509162 USP31Q70CQ4 1352 aa10.17□□□□□ -0.78
TOPBP1-207ENST00000509162 KTN1Q86UP2 1357 aaKnown RBP10.17□□□□□ -0.78
TOPBP1-207ENST00000509162 PEAK1Q9H792 1746 aa10.17□□□□□ -0.78
TOPBP1-207ENST00000509162 IFNL1Q8IU54 200 aa10.17□□□□□ -0.78
TOPBP1-207ENST00000509162 CDK12Q9NYV4 1490 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-207ENST00000509162 BRD4O60885 1362 aaPredicted RBP10.16□□□□□ -0.78
TOPBP1-207ENST00000509162 TTLL13PA6NNM8 815 aa10.16□□□□□ -0.78
TOPBP1-207ENST00000509162 MEX3CQ5U5Q3 659 aaKnown RBP10.16□□□□□ -0.78
TOPBP1-207ENST00000509162 NME9Q86XW9 330 aa10.16□□□□□ -0.78
TOPBP1-207ENST00000509162 LTN1O94822 1766 aa10.16□□□□□ -0.78
TOPBP1-207ENST00000509162 RGPD5Q99666 1765 aa10.16□□□□□ -0.78
TOPBP1-207ENST00000509162 COL5A2P05997 1499 aaPredicted RBP10.16□□□□□ -0.78
TOPBP1-207ENST00000509162 ANKRD26Q9UPS8 1709 aa10.16□□□□□ -0.78
TOPBP1-207ENST00000509162 CPDO75976 1380 aa10.15□□□□□ -0.78
TOPBP1-207ENST00000509162 NINLQ9Y2I6 1382 aa10.15□□□□□ -0.78
TOPBP1-207ENST00000509162 BRWD3Q6RI45 1802 aa10.15□□□□□ -0.78
TOPBP1-207ENST00000509162 FAM83GA6ND36 823 aa10.15□□□□□ -0.78
TOPBP1-207ENST00000509162 LMOD2Q6P5Q4 547 aa10.15□□□□□ -0.78
TOPBP1-207ENST00000509162 SPRYD3Q8NCJ5 442 aa10.15□□□□□ -0.78
TOPBP1-207ENST00000509162 PUS7Q96PZ0 661 aaKnown RBP10.15□□□□□ -0.78
TOPBP1-207ENST00000509162 PYGBP11216 843 aa10.14□□□□□ -0.79
TOPBP1-207ENST00000509162 CFAP44Q96MT7 982 aa10.14□□□□□ -0.79
TOPBP1-207ENST00000509162 CARD14Q9BXL6 1004 aa10.14□□□□□ -0.79
TOPBP1-207ENST00000509162 NSD3Q9BZ95 1437 aa10.14□□□□□ -0.79
TOPBP1-207ENST00000509162 ABCC6O95255 1503 aa10.13□□□□□ -0.79
TOPBP1-207ENST00000509162 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
TOPBP1-207ENST00000509162 TMF1P82094 1093 aa10.13□□□□□ -0.79
TOPBP1-207ENST00000509162 CHRNA2Q15822 529 aa10.13□□□□□ -0.79
TOPBP1-207ENST00000509162 KIF7Q2M1P5 1343 aa10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 TTC21AQ8NDW8 1320 aa10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 LRRC37A3O60309 1634 aa10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 CHRM1P11229 460 aaPredicted RBP10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 ABTB2Q8N961 1025 aa10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 TMC1Q8TDI8 760 aa10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 NGLY1Q96IV0 654 aa10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 USP21Q9UK80 565 aa10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 FAM208AQ9UK61 1670 aaKnown RBP10.12□□□□□ -0.79
TOPBP1-207ENST00000509162 GCP02774 474 aa10.11□□□□□ -0.79
TOPBP1-207ENST00000509162 ZC3H6P61129 1189 aaKnown RBP10.11□□□□□ -0.79
TOPBP1-207ENST00000509162 EIF4G2P78344 907 aaKnown RBP eCLIP10.11□□□□□ -0.79
TOPBP1-207ENST00000509162 ZNF772Q68DY9 489 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms