RNA–Protein interactions for RNA: ENST00000508900.1

FRAS1-203, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best)

Gene FRAS1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-203ENST00000508900 CDC45O75419 566 aa15.74■□□□□ 0.11
FRAS1-203ENST00000508900 GSPT1P15170 499 aaKnown RBP15.74■□□□□ 0.11
FRAS1-203ENST00000508900 MSNP26038 577 aaKnown RBP15.74■□□□□ 0.11
FRAS1-203ENST00000508900 ANP32BQ92688 251 aaKnown RBP15.74■□□□□ 0.11
FRAS1-203ENST00000508900 NPATQ14207 1427 aa15.74■□□□□ 0.11
FRAS1-203ENST00000508900 VAMP4O75379 141 aa15.73■□□□□ 0.11
FRAS1-203ENST00000508900 FYB1O15117 783 aa15.73■□□□□ 0.11
FRAS1-203ENST00000508900 NUCB2P80303 420 aa15.73■□□□□ 0.11
FRAS1-203ENST00000508900 RABEP1Q15276 862 aa15.73■□□□□ 0.11
FRAS1-203ENST00000508900 MCTP1Q6DN14 999 aa15.73■□□□□ 0.11
FRAS1-203ENST00000508900 CAVIN1Q6NZI2 390 aaKnown RBP15.72■□□□□ 0.11
FRAS1-203ENST00000508900 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
FRAS1-203ENST00000508900 PKP1Q13835 747 aa15.72■□□□□ 0.11
FRAS1-203ENST00000508900 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
FRAS1-203ENST00000508900 CFAP65Q6ZU64 1925 aaKnown RBP15.71■□□□□ 0.11
FRAS1-203ENST00000508900 CDC42BPGQ6DT37 1551 aa15.71■□□□□ 0.11
FRAS1-203ENST00000508900 DIAPH1O60610 1272 aaKnown RBP15.71■□□□□ 0.11
FRAS1-203ENST00000508900 CALD1Q05682 793 aaKnown RBP15.71■□□□□ 0.11
FRAS1-203ENST00000508900 PLEKHM2Q8IWE5 1019 aa15.71■□□□□ 0.11
FRAS1-203ENST00000508900 ABCC4O15439 1325 aa15.71■□□□□ 0.11
FRAS1-203ENST00000508900 USP26Q9BXU7 913 aa15.7■□□□□ 0.1
FRAS1-203ENST00000508900 CD163L1Q9NR16 1453 aa15.7■□□□□ 0.1
FRAS1-203ENST00000508900 LRRC7Q96NW7 1537 aa15.7■□□□□ 0.1
FRAS1-203ENST00000508900 PRIM1P49642 420 aaKnown RBP15.7■□□□□ 0.1
FRAS1-203ENST00000508900 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
FRAS1-203ENST00000508900 KNDC1Q76NI1 1749 aa15.69■□□□□ 0.1
FRAS1-203ENST00000508900 FCHSD2O94868 740 aa15.69■□□□□ 0.1
FRAS1-203ENST00000508900 TSPYL6Q8N831 410 aa15.69■□□□□ 0.1
FRAS1-203ENST00000508900 GPT2Q8TD30 523 aa15.69■□□□□ 0.1
FRAS1-203ENST00000508900 R3HCC1Q9Y3T6 440 aaKnown RBP15.69■□□□□ 0.1
FRAS1-203ENST00000508900 FAM135BQ49AJ0 1406 aa15.69■□□□□ 0.1
FRAS1-203ENST00000508900 ZDHHC9Q9Y397 364 aa15.69■□□□□ 0.1
FRAS1-203ENST00000508900 NCLP19338 710 aaKnown RBP15.67■□□□□ 0.1
FRAS1-203ENST00000508900 XPCQ01831 940 aaPredicted RBP15.67■□□□□ 0.1
FRAS1-203ENST00000508900 TTC22Q5TAA0 569 aa15.67■□□□□ 0.1
FRAS1-203ENST00000508900 CWC22Q9HCG8 908 aaKnown RBP15.67■□□□□ 0.1
FRAS1-203ENST00000508900 ZKSCAN5Q9Y2L8 839 aa15.67■□□□□ 0.1
FRAS1-203ENST00000508900 NEXMIFQ5QGS0 1516 aa15.67■□□□□ 0.1
FRAS1-203ENST00000508900 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
FRAS1-203ENST00000508900 PIK3C2BO00750 1634 aa15.67■□□□□ 0.1
FRAS1-203ENST00000508900 DCTPP1Q9H773 170 aa15.66■□□□□ 0.1
FRAS1-203ENST00000508900 RBM27Q9P2N5 1060 aaKnown RBP15.66■□□□□ 0.1
FRAS1-203ENST00000508900 PRPF40AO75400 957 aaKnown RBP15.66■□□□□ 0.1
FRAS1-203ENST00000508900 ZNF853P0CG23 659 aa15.66■□□□□ 0.1
FRAS1-203ENST00000508900 MAP7D2Q96T17 732 aa15.66■□□□□ 0.1
FRAS1-203ENST00000508900 PRDM4Q9UKN5 801 aa15.66■□□□□ 0.1
FRAS1-203ENST00000508900 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
FRAS1-203ENST00000508900 SAFB2Q14151 953 aaKnown RBP eCLIP15.65■□□□□ 0.1
FRAS1-203ENST00000508900 ZGPATQ8N5A5 531 aaKnown RBP15.65■□□□□ 0.1
FRAS1-203ENST00000508900 THUMPD2Q9BTF0 503 aaKnown RBP15.65■□□□□ 0.1
FRAS1-203ENST00000508900 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
FRAS1-203ENST00000508900 C16orf71Q8IYS4 520 aaPredicted RBP15.65■□□□□ 0.1
FRAS1-203ENST00000508900 PHACTR3Q96KR7 559 aa15.65■□□□□ 0.1
FRAS1-203ENST00000508900 MCM5P33992 734 aa15.64■□□□□ 0.09
FRAS1-203ENST00000508900 LRSAM1Q6UWE0 723 aa15.64■□□□□ 0.09
FRAS1-203ENST00000508900 CFAP44Q96MT7 982 aa15.64■□□□□ 0.09
FRAS1-203ENST00000508900 TMEM63CQ9P1W3 806 aa15.64■□□□□ 0.09
FRAS1-203ENST00000508900 VGFO15240 615 aaPredicted RBP15.63■□□□□ 0.09
FRAS1-203ENST00000508900 SRPK2P78362 688 aaKnown RBP15.63■□□□□ 0.09
FRAS1-203ENST00000508900 NFE2L2Q16236 605 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 FAM13BQ9NYF5 915 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 NSFL1CQ9UNZ2 370 aaKnown RBP15.63■□□□□ 0.09
FRAS1-203ENST00000508900 SIGLEC1Q9BZZ2 1709 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 CLTCQ00610 1675 aaKnown RBP15.63■□□□□ 0.09
FRAS1-203ENST00000508900 ZFYVE9O95405 1425 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 UQCRHLA0A096LP55 91 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 UQCRHP07919 91 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 IFT57Q9NWB7 429 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 KIF24Q5T7B8 1368 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 ATAD2Q6PL18 1390 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 HECW2Q9P2P5 1572 aa15.63■□□□□ 0.09
FRAS1-203ENST00000508900 CHAMP1Q96JM3 812 aa15.62■□□□□ 0.09
FRAS1-203ENST00000508900 MBIPQ9NS73 344 aa15.62■□□□□ 0.09
FRAS1-203ENST00000508900 INTS3Q68E01 1043 aaKnown RBP15.62■□□□□ 0.09
FRAS1-203ENST00000508900 PTPRMP28827 1452 aa15.61■□□□□ 0.09
FRAS1-203ENST00000508900 KIF20BQ96Q89 1820 aa15.61■□□□□ 0.09
FRAS1-203ENST00000508900 ELL2O00472 640 aaPredicted RBP15.61■□□□□ 0.09
FRAS1-203ENST00000508900 GNAI1P63096 354 aa15.61■□□□□ 0.09
FRAS1-203ENST00000508900 CSPP1Q1MSJ5 1256 aa15.61■□□□□ 0.09
FRAS1-203ENST00000508900 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
FRAS1-203ENST00000508900 ABCC3O15438 1527 aa15.61■□□□□ 0.09
FRAS1-203ENST00000508900 DYNC1I1O14576 645 aa15.6■□□□□ 0.09
FRAS1-203ENST00000508900 SDSP20132 328 aa15.6■□□□□ 0.09
FRAS1-203ENST00000508900 C8orf58Q8NAV2 365 aa15.6■□□□□ 0.09
FRAS1-203ENST00000508900 API5Q9BZZ5 524 aaKnown RBP15.6■□□□□ 0.09
FRAS1-203ENST00000508900 POLKQ9UBT6 870 aa15.6■□□□□ 0.09
FRAS1-203ENST00000508900 SYCE3A1L190 88 aa15.6■□□□□ 0.09
FRAS1-203ENST00000508900 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
FRAS1-203ENST00000508900 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
FRAS1-203ENST00000508900 ST18O60284 1047 aa15.59■□□□□ 0.09
FRAS1-203ENST00000508900 FBLN1P23142 703 aa15.59■□□□□ 0.09
FRAS1-203ENST00000508900 ANKRD44Q8N8A2 993 aa15.59■□□□□ 0.09
FRAS1-203ENST00000508900 CCDC39Q9UFE4 941 aa15.59■□□□□ 0.09
FRAS1-203ENST00000508900 GGT6Q6P531 493 aa15.58■□□□□ 0.08
FRAS1-203ENST00000508900 STK26Q9P289 416 aa15.58■□□□□ 0.08
FRAS1-203ENST00000508900 SASS6Q6UVJ0 657 aa15.58■□□□□ 0.08
FRAS1-203ENST00000508900 HMOX1P09601 288 aa15.57■□□□□ 0.08
FRAS1-203ENST00000508900 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms