RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 DLC1Q96QB1 1528 aa8.6□□□□□ -1.03
KDM3B-205ENST00000508386 C1QTNF8P60827 252 aa8.6□□□□□ -1.03
KDM3B-205ENST00000508386 TCP11L2Q8N4U5 519 aa8.6□□□□□ -1.03
KDM3B-205ENST00000508386 NGDNQ8NEJ9 315 aaKnown RBP8.6□□□□□ -1.03
KDM3B-205ENST00000508386 SGIP1Q9BQI5 828 aa8.6□□□□□ -1.03
KDM3B-205ENST00000508386 SENP3-EIF4A1A0A087X0R7 540 aa8.59□□□□□ -1.03
KDM3B-205ENST00000508386 PLSCR1O15162 318 aa8.59□□□□□ -1.03
KDM3B-205ENST00000508386 EVA1CP58658 441 aa8.59□□□□□ -1.03
KDM3B-205ENST00000508386 NUDT16Q96DE0 195 aaKnown RBP8.59□□□□□ -1.03
KDM3B-205ENST00000508386 SYT17Q9BSW7 474 aa8.59□□□□□ -1.03
KDM3B-205ENST00000508386 NRKQ7Z2Y5 1582 aa8.59□□□□□ -1.03
KDM3B-205ENST00000508386 PEAK1Q9H792 1746 aa8.59□□□□□ -1.03
KDM3B-205ENST00000508386 TULP4Q9NRJ4 1543 aa8.59□□□□□ -1.03
KDM3B-205ENST00000508386 PHRF1Q9P1Y6 1649 aaKnown RBP8.58□□□□□ -1.04
KDM3B-205ENST00000508386 FHDC1Q9C0D6 1143 aaPredicted RBP8.58□□□□□ -1.04
KDM3B-205ENST00000508386 MYOM1P52179 1685 aa8.58□□□□□ -1.04
KDM3B-205ENST00000508386 LMO7Q8WWI1 1683 aa8.58□□□□□ -1.04
KDM3B-205ENST00000508386 MARCH10Q8NA82 808 aaPredicted RBP8.57□□□□□ -1.04
KDM3B-205ENST00000508386 CPDO75976 1380 aa8.57□□□□□ -1.04
KDM3B-205ENST00000508386 ATP7BP35670 1465 aa8.57□□□□□ -1.04
KDM3B-205ENST00000508386 SBF2Q86WG5 1849 aa8.57□□□□□ -1.04
KDM3B-205ENST00000508386 ACEP12821 1306 aa8.56□□□□□ -1.04
KDM3B-205ENST00000508386 FBXO3Q9UK99 471 aa8.56□□□□□ -1.04
KDM3B-205ENST00000508386 THRAP3Q9Y2W1 955 aaKnown RBP8.56□□□□□ -1.04
KDM3B-205ENST00000508386 USP19O94966 1318 aa8.55□□□□□ -1.04
KDM3B-205ENST00000508386 PARP4Q9UKK3 1724 aaKnown RBP8.55□□□□□ -1.04
KDM3B-205ENST00000508386 GCP02774 474 aa8.55□□□□□ -1.04
KDM3B-205ENST00000508386 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
KDM3B-205ENST00000508386 BCL11BQ9C0K0 894 aaPredicted RBP8.55□□□□□ -1.04
KDM3B-205ENST00000508386 POLR3AO14802 1390 aaPredicted RBP8.55□□□□□ -1.04
KDM3B-205ENST00000508386 COL5A2P05997 1499 aaPredicted RBP8.55□□□□□ -1.04
KDM3B-205ENST00000508386 PLEKHG3A1L390 1219 aa8.54□□□□□ -1.04
KDM3B-205ENST00000508386 AXIN2Q9Y2T1 843 aa8.54□□□□□ -1.04
KDM3B-205ENST00000508386 EIF3AQ14152 1382 aaKnown RBP8.53□□□□□ -1.04
KDM3B-205ENST00000508386 SLC15A2Q16348 729 aa8.53□□□□□ -1.04
KDM3B-205ENST00000508386 TXNRD1Q16881 649 aa8.53□□□□□ -1.04
KDM3B-205ENST00000508386 ABTB2Q8N961 1025 aa8.53□□□□□ -1.04
KDM3B-205ENST00000508386 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
KDM3B-205ENST00000508386 OVOS2A0A0G2JMS6 1433 aa8.53□□□□□ -1.04
KDM3B-205ENST00000508386 OVOS2A0A0J9YW53 1432 aa8.53□□□□□ -1.04
KDM3B-205ENST00000508386 OVOS2Q6IE36 1432 aa8.53□□□□□ -1.04
KDM3B-205ENST00000508386 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
KDM3B-205ENST00000508386 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
KDM3B-205ENST00000508386 CHD4Q14839 1912 aa8.52□□□□□ -1.04
KDM3B-205ENST00000508386 HAX1O00165 279 aa8.52□□□□□ -1.05
KDM3B-205ENST00000508386 CRB1P82279 1406 aa8.52□□□□□ -1.05
KDM3B-205ENST00000508386 LRRC37A3O60309 1634 aa8.51□□□□□ -1.05
KDM3B-205ENST00000508386 PRKAR2AP13861 404 aaKnown RBP8.51□□□□□ -1.05
KDM3B-205ENST00000508386 DDB1Q16531 1140 aa8.51□□□□□ -1.05
KDM3B-205ENST00000508386 MTFR1LQ9H019 292 aa8.51□□□□□ -1.05
KDM3B-205ENST00000508386 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
KDM3B-205ENST00000508386 BCL9O00512 1426 aa8.51□□□□□ -1.05
KDM3B-205ENST00000508386 COL18A1P39060 1754 aa8.5□□□□□ -1.05
KDM3B-205ENST00000508386 PRR29P0C7W0 189 aa8.5□□□□□ -1.05
KDM3B-205ENST00000508386 DCAF11Q8TEB1 546 aa8.5□□□□□ -1.05
KDM3B-205ENST00000508386 ARXQ96QS3 562 aa8.5□□□□□ -1.05
KDM3B-205ENST00000508386 TOPAZ1Q8N9V7 1692 aa8.49□□□□□ -1.05
KDM3B-205ENST00000508386 AATKQ6ZMQ8 1374 aa8.49□□□□□ -1.05
KDM3B-205ENST00000508386 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
KDM3B-205ENST00000508386 ZNF827Q17R98 1081 aa8.49□□□□□ -1.05
KDM3B-205ENST00000508386 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
KDM3B-205ENST00000508386 SP7Q8TDD2 431 aaPredicted RBP8.49□□□□□ -1.05
KDM3B-205ENST00000508386 LRRC4BQ9NT99 713 aa8.49□□□□□ -1.05
KDM3B-205ENST00000508386 STK32BQ9NY57 414 aa8.49□□□□□ -1.05
KDM3B-205ENST00000508386 ARHGEF28Q8N1W1 1705 aaKnown RBP8.49□□□□□ -1.05
KDM3B-205ENST00000508386 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
KDM3B-205ENST00000508386 ZBTB7CA1YPR0 619 aa8.48□□□□□ -1.05
KDM3B-205ENST00000508386 TOM1L2Q6ZVM7 507 aa8.48□□□□□ -1.05
KDM3B-205ENST00000508386 ITSN1Q15811 1721 aa8.47□□□□□ -1.05
KDM3B-205ENST00000508386 SHANK3Q9BYB0 1731 aa8.47□□□□□ -1.05
KDM3B-205ENST00000508386 GIGYF1O75420 1035 aaPredicted RBP8.47□□□□□ -1.05
KDM3B-205ENST00000508386 NLGN2Q8NFZ4 835 aa8.47□□□□□ -1.05
KDM3B-205ENST00000508386 WDR17Q8IZU2 1322 aa8.47□□□□□ -1.05
KDM3B-205ENST00000508386 PAPPAQ13219 1627 aa8.47□□□□□ -1.05
KDM3B-205ENST00000508386 SLIT3O75094 1523 aa8.46□□□□□ -1.05
KDM3B-205ENST00000508386 NLRP6P59044 892 aa8.46□□□□□ -1.06
KDM3B-205ENST00000508386 GPR162Q16538 588 aa8.46□□□□□ -1.06
KDM3B-205ENST00000508386 NBPF1Q3BBV0 1214 aa8.46□□□□□ -1.06
KDM3B-205ENST00000508386 ARHGEF25Q86VW2 580 aa8.46□□□□□ -1.06
KDM3B-205ENST00000508386 ACSBG1Q96GR2 724 aa8.46□□□□□ -1.06
KDM3B-205ENST00000508386 CARD10Q9BWT7 1032 aa8.46□□□□□ -1.06
KDM3B-205ENST00000508386 CABP2Q9NPB3 220 aa8.46□□□□□ -1.06
KDM3B-205ENST00000508386 YBX3P16989 372 aaKnown RBP eCLIP8.45□□□□□ -1.062e-8■□□□□ 8.6
KDM3B-205ENST00000508386 CABP1Q9NZU7 370 aa8.45□□□□□ -1.06
KDM3B-205ENST00000508386 RGPD5Q99666 1765 aa8.45□□□□□ -1.06
KDM3B-205ENST00000508386 WNK3Q9BYP7 1800 aa8.45□□□□□ -1.06
KDM3B-205ENST00000508386 PPIP5K1Q6PFW1 1433 aa8.45□□□□□ -1.06
KDM3B-205ENST00000508386 EXOC5O00471 708 aa8.44□□□□□ -1.06
KDM3B-205ENST00000508386 KCNQ4P56696 695 aa8.44□□□□□ -1.06
KDM3B-205ENST00000508386 USP6P35125 1406 aa8.44□□□□□ -1.06
KDM3B-205ENST00000508386 CDCA7Q9BWT1 371 aaPredicted RBP8.43□□□□□ -1.06
KDM3B-205ENST00000508386 PNPLA7Q6ZV29 1317 aa8.43□□□□□ -1.06
KDM3B-205ENST00000508386 COL24A1Q17RW2 1714 aa8.43□□□□□ -1.06
KDM3B-205ENST00000508386 AKAP12Q02952 1782 aa8.43□□□□□ -1.06
KDM3B-205ENST00000508386 PCNTO95613 3336 aa8.42□□□□□ -1.06
KDM3B-205ENST00000508386 SOX12O15370 315 aa8.42□□□□□ -1.06
KDM3B-205ENST00000508386 CPSF1Q10570 1443 aaKnown RBP8.42□□□□□ -1.06
KDM3B-205ENST00000508386 PIK3C2AO00443 1686 aa8.42□□□□□ -1.06
KDM3B-205ENST00000508386 NHSQ6T4R5 1651 aa8.41□□□□□ -1.06
KDM3B-205ENST00000508386 VASPP50552 380 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms