RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MYH16Q9H6N6 1097 aa6.31□□□□□ -1.4
HMGB3P16-201ENST00000508037 CEP152O94986 1710 aa6.3□□□□□ -1.4
HMGB3P16-201ENST00000508037 ARAP3Q8WWN8 1544 aa6.3□□□□□ -1.4
HMGB3P16-201ENST00000508037 E2F4Q16254 413 aa6.3□□□□□ -1.4
HMGB3P16-201ENST00000508037 CCDC27Q2M243 656 aa6.3□□□□□ -1.4
HMGB3P16-201ENST00000508037 ZNF454Q8N9F8 522 aa6.3□□□□□ -1.4
HMGB3P16-201ENST00000508037 RUNDC1Q96C34 613 aa6.3□□□□□ -1.4
HMGB3P16-201ENST00000508037 TET3O43151 1660 aa6.3□□□□□ -1.4
HMGB3P16-201ENST00000508037 SPAG9O60271 1321 aaKnown RBP6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 DPYSL4O14531 572 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 ARHGAP33O14559 1287 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 PLCB2Q00722 1185 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 GLIPR1L2Q4G1C9 344 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 ANKRD13DQ6ZTN6 518 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 WWC1Q8IX03 1113 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 UBE2Q2Q8WVN8 375 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 TBC1D32Q96NH3 1257 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 MYOM1P52179 1685 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 ABCC1P33527 1531 aa6.29□□□□□ -1.4
HMGB3P16-201ENST00000508037 GOLGA6L3A6NEY3 463 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 BCAR3O75815 825 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 LSM11P83369 360 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 SKAP1Q86WV1 359 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 CCDC146Q8IYE0 955 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 PUS7Q96PZ0 661 aaKnown RBP6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 CHMP5Q9NZZ3 219 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 AXIN2Q9Y2T1 843 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 NSD2O96028 1365 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 DEPDC5O75140 1603 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 UHRF1BP1LA0JNW5 1464 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 ADGRL1O94910 1474 aa6.28□□□□□ -1.4
HMGB3P16-201ENST00000508037 USP19O94966 1318 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 DDX11L8A8MPP1 907 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 IGHDP01880 384 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 FOSBP53539 338 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 RARSP54136 660 aaKnown RBP6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 MORC1Q86VD1 984 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 CHMP4BQ9H444 224 aaKnown RBP6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 COG6Q9Y2V7 657 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 MYO3AQ8NEV4 1616 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 ERVK-7P63135 1459 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 SETBP1Q9Y6X0 1596 aa6.27□□□□□ -1.41
HMGB3P16-201ENST00000508037 CLTCL1P53675 1640 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 USP32Q8NFA0 1604 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 MAP3K4Q9Y6R4 1608 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 SPDYE16A6NNV3 312 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 PTGER2P43116 358 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 MRE11P49959 708 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 MMRN1Q13201 1228 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 ZKSCAN2Q63HK3 967 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 POTEEQ6S8J3 1075 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 ZDHHC16Q969W1 377 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 ANTXR1Q9H6X2 564 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 VWDEQ8N2E2 1590 aa6.26□□□□□ -1.41
HMGB3P16-201ENST00000508037 MCM4P33991 863 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 MVPQ14764 893 aaKnown RBP6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 SKOR2Q2VWA4 1001 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 HSCBQ8IWL3 235 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 FTSJ3Q8IY81 847 aaKnown RBP6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 PANK1Q8TE04 598 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 KCNK17Q96T54 332 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 SLKQ9H2G2 1235 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 PNNQ9H307 717 aaKnown RBP6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 BCL2L12Q9HB09 334 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 DDX19BQ9UMR2 479 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 PDZRN3Q9UPQ7 1066 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 IQSEC2Q5JU85 1478 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 NLRP1Q9C000 1473 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 NRXN1Q9ULB1 1477 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 ZFYVE16Q7Z3T8 1539 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 RPGRIP1LQ68CZ1 1315 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 KIF16BQ96L93 1317 aa6.25□□□□□ -1.41
HMGB3P16-201ENST00000508037 FANCAO15360 1455 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 ABCC11Q96J66 1382 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 FSD2A1L4K1 749 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 IPO8O15397 1037 aaKnown RBP6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 PHF14O94880 888 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 PTPREP23469 700 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 PSEN2P49810 448 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 HDAC1Q13547 482 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 DZIP1LQ8IYY4 767 aaKnown RBP6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 TCP11L2Q8N4U5 519 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 FBXW7Q969H0 707 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 GBP4Q96PP9 640 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 TBC1D2Q9BYX2 928 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 C22orf23Q9BZE7 217 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 POGKQ9P215 609 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 NSD3Q9BZ95 1437 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 TRAPPC8Q9Y2L5 1435 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 IL16Q14005 1332 aa6.24□□□□□ -1.41
HMGB3P16-201ENST00000508037 KIF1BO60333 1816 aa6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 CLCN1P35523 988 aa6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 PDIA6Q15084 440 aa6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 TYW1BQ6NUM6 668 aa6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 EPAS1Q99814 870 aa6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 CARD14Q9BXL6 1004 aa6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 ARIH1Q9Y4X5 557 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 PCDHGA10Q9Y5H3 936 aa6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 ABCA6Q8N139 1617 aa6.23□□□□□ -1.41
HMGB3P16-201ENST00000508037 ATP7AQ04656 1500 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms