RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 IL13P35225 146 aa13.41□□□□□ -0.26
DDX41-203ENST00000504781 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
DDX41-203ENST00000504781 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
DDX41-203ENST00000504781 APAF1O14727 1248 aa13.39□□□□□ -0.27
DDX41-203ENST00000504781 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
DDX41-203ENST00000504781 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
DDX41-203ENST00000504781 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
DDX41-203ENST00000504781 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
DDX41-203ENST00000504781 U2SURPO15042 1029 aaKnown RBP13.38□□□□□ -0.27
DDX41-203ENST00000504781 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
DDX41-203ENST00000504781 COL3A1P02461 1466 aaPredicted RBP13.37□□□□□ -0.27
DDX41-203ENST00000504781 PXDNQ92626 1479 aa13.37□□□□□ -0.27
DDX41-203ENST00000504781 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
DDX41-203ENST00000504781 MSH5O43196 834 aa13.37□□□□□ -0.27
DDX41-203ENST00000504781 NEFMP07197 916 aa13.37□□□□□ -0.27
DDX41-203ENST00000504781 AMPHP49418 695 aa13.37□□□□□ -0.27
DDX41-203ENST00000504781 CCDC27Q2M243 656 aa13.37□□□□□ -0.27
DDX41-203ENST00000504781 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
DDX41-203ENST00000504781 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
DDX41-203ENST00000504781 GCP02774 474 aa13.36□□□□□ -0.27
DDX41-203ENST00000504781 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
DDX41-203ENST00000504781 FNBP4Q8N3X1 1017 aaPredicted RBP13.36□□□□□ -0.27
DDX41-203ENST00000504781 TCP11L2Q8N4U5 519 aa13.36□□□□□ -0.27
DDX41-203ENST00000504781 PIK3C2AO00443 1686 aa13.36□□□□□ -0.27
DDX41-203ENST00000504781 RGS12O14924 1447 aa13.36□□□□□ -0.27
DDX41-203ENST00000504781 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
DDX41-203ENST00000504781 WDR63Q8IWG1 891 aa13.35□□□□□ -0.27
DDX41-203ENST00000504781 IP6K1Q92551 441 aa13.35□□□□□ -0.27
DDX41-203ENST00000504781 SPATA31A3Q5VYP0 1347 aa13.35□□□□□ -0.27
DDX41-203ENST00000504781 FLT4P35916 1363 aa13.34□□□□□ -0.27
DDX41-203ENST00000504781 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
DDX41-203ENST00000504781 EIF4A2Q14240 407 aaKnown RBP13.34□□□□□ -0.27
DDX41-203ENST00000504781 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
DDX41-203ENST00000504781 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
DDX41-203ENST00000504781 SALL2Q9Y467 1007 aaPredicted RBP13.34□□□□□ -0.27
DDX41-203ENST00000504781 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
DDX41-203ENST00000504781 COL22A1Q8NFW1 1626 aaPredicted RBP13.33□□□□□ -0.28
DDX41-203ENST00000504781 HOXC9P31274 260 aa13.33□□□□□ -0.28
DDX41-203ENST00000504781 ARHGEF25Q86VW2 580 aa13.33□□□□□ -0.28
DDX41-203ENST00000504781 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
DDX41-203ENST00000504781 USP19O94966 1318 aa13.33□□□□□ -0.28
DDX41-203ENST00000504781 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
DDX41-203ENST00000504781 WWC1Q8IX03 1113 aa13.32□□□□□ -0.28
DDX41-203ENST00000504781 TRMT2AQ8IZ69 625 aaKnown RBP13.32□□□□□ -0.28
DDX41-203ENST00000504781 TRPM3Q9HCF6 1732 aaPredicted RBP13.32□□□□□ -0.28
DDX41-203ENST00000504781 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
DDX41-203ENST00000504781 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
DDX41-203ENST00000504781 SOX12O15370 315 aa13.31□□□□□ -0.28
DDX41-203ENST00000504781 RTL1A6NKG5 1358 aa13.31□□□□□ -0.28
DDX41-203ENST00000504781 ATRNO75882 1429 aa13.3□□□□□ -0.28
DDX41-203ENST00000504781 SLFN5Q08AF3 891 aa13.3□□□□□ -0.28
DDX41-203ENST00000504781 UNC5CLQ8IV45 518 aa13.3□□□□□ -0.28
DDX41-203ENST00000504781 GJD4Q96KN9 370 aaPredicted RBP13.3□□□□□ -0.28
DDX41-203ENST00000504781 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
DDX41-203ENST00000504781 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
DDX41-203ENST00000504781 E9PSI1 815 aa13.29□□□□□ -0.28
DDX41-203ENST00000504781 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
DDX41-203ENST00000504781 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
DDX41-203ENST00000504781 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
DDX41-203ENST00000504781 TNS3Q68CZ2 1445 aa13.29□□□□□ -0.28
DDX41-203ENST00000504781 SLIT3O75094 1523 aa13.29□□□□□ -0.28
DDX41-203ENST00000504781 ALS2Q96Q42 1657 aa13.28□□□□□ -0.28
DDX41-203ENST00000504781 HMOX1P09601 288 aa13.28□□□□□ -0.28
DDX41-203ENST00000504781 RIPK4P57078 832 aa13.28□□□□□ -0.28
DDX41-203ENST00000504781 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
DDX41-203ENST00000504781 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
DDX41-203ENST00000504781 EYA1Q99502 592 aa13.28□□□□□ -0.28
DDX41-203ENST00000504781 SENP3-EIF4A1A0A087X0R7 540 aa13.27□□□□□ -0.29
DDX41-203ENST00000504781 NEUROD2Q15784 382 aa13.27□□□□□ -0.29
DDX41-203ENST00000504781 NFE2L2Q16236 605 aa13.27□□□□□ -0.29
DDX41-203ENST00000504781 SUPT16HQ9Y5B9 1047 aaKnown RBP13.27□□□□□ -0.29
DDX41-203ENST00000504781 NFAT5O94916 1531 aa13.26□□□□□ -0.29
DDX41-203ENST00000504781 CALD1Q05682 793 aaKnown RBP13.26□□□□□ -0.29
DDX41-203ENST00000504781 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
DDX41-203ENST00000504781 IL16Q14005 1332 aa13.26□□□□□ -0.29
DDX41-203ENST00000504781 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
DDX41-203ENST00000504781 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
DDX41-203ENST00000504781 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
DDX41-203ENST00000504781 PEAK1Q9H792 1746 aa13.26□□□□□ -0.29
DDX41-203ENST00000504781 PHRF1Q9P1Y6 1649 aaKnown RBP13.26□□□□□ -0.29
DDX41-203ENST00000504781 TRIM35Q9UPQ4 493 aa13.25□□□□□ -0.29
DDX41-203ENST00000504781 KDRP35968 1356 aa13.24□□□□□ -0.29
DDX41-203ENST00000504781 A0A0G2JS52 829 aa13.24□□□□□ -0.29
DDX41-203ENST00000504781 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
DDX41-203ENST00000504781 NEFLP07196 543 aa13.24□□□□□ -0.29
DDX41-203ENST00000504781 MYT1Q01538 1121 aa13.24□□□□□ -0.29
DDX41-203ENST00000504781 ERICH6BQ5W0A0 696 aa13.24□□□□□ -0.29
DDX41-203ENST00000504781 RRP7AQ9Y3A4 280 aaKnown RBP13.24□□□□□ -0.29
DDX41-203ENST00000504781 SLIT2O94813 1529 aa13.23□□□□□ -0.29
DDX41-203ENST00000504781 CPDO75976 1380 aa13.23□□□□□ -0.29
DDX41-203ENST00000504781 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
DDX41-203ENST00000504781 ZC3H6P61129 1189 aaKnown RBP13.23□□□□□ -0.29
DDX41-203ENST00000504781 MYH16Q9H6N6 1097 aa13.23□□□□□ -0.29
DDX41-203ENST00000504781 RCAN3Q9UKA8 241 aa13.23□□□□□ -0.29
DDX41-203ENST00000504781 LTN1O94822 1766 aa13.22□□□□□ -0.29
DDX41-203ENST00000504781 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
DDX41-203ENST00000504781 VPS72Q15906 364 aa13.22□□□□□ -0.29
DDX41-203ENST00000504781 SEPT12Q8IYM1 358 aa13.22□□□□□ -0.29
DDX41-203ENST00000504781 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
DDX41-203ENST00000504781 GAS2L2Q8NHY3 880 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms