RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 KCNH5Q8NCM2 988 aa17.43■□□□□ 0.38
LMNA-220ENST00000504687 USP19O94966 1318 aa17.43■□□□□ 0.38
LMNA-220ENST00000504687 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
LMNA-220ENST00000504687 EIF4A2Q14240 407 aaKnown RBP17.42■□□□□ 0.38
LMNA-220ENST00000504687 KDRP35968 1356 aa17.41■□□□□ 0.38
LMNA-220ENST00000504687 NEFMP07197 916 aa17.41■□□□□ 0.38
LMNA-220ENST00000504687 SENP3-EIF4A1A0A087X0R7 540 aa17.4■□□□□ 0.38
LMNA-220ENST00000504687 CERKQ8TCT0 537 aa17.4■□□□□ 0.38
LMNA-220ENST00000504687 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
LMNA-220ENST00000504687 PXDNQ92626 1479 aa17.39■□□□□ 0.37
LMNA-220ENST00000504687 ABCC6O95255 1503 aa17.39■□□□□ 0.37
LMNA-220ENST00000504687 FOXO3O43524 673 aa17.39■□□□□ 0.37
LMNA-220ENST00000504687 PRKAR2BP31323 418 aa17.39■□□□□ 0.37
LMNA-220ENST00000504687 KRT28Q7Z3Y7 464 aa17.39■□□□□ 0.37
LMNA-220ENST00000504687 NPHP3Q7Z494 1330 aa17.39■□□□□ 0.37
LMNA-220ENST00000504687 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
LMNA-220ENST00000504687 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
LMNA-220ENST00000504687 PAK3O75914 559 aaPredicted RBP17.38■□□□□ 0.37
LMNA-220ENST00000504687 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
LMNA-220ENST00000504687 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
LMNA-220ENST00000504687 IGSF1Q8N6C5 1336 aa17.38■□□□□ 0.37
LMNA-220ENST00000504687 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
LMNA-220ENST00000504687 RRP1P56182 461 aaKnown RBP17.37■□□□□ 0.37
LMNA-220ENST00000504687 HSP90AB2PQ58FF8 381 aa17.37■□□□□ 0.37
LMNA-220ENST00000504687 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
LMNA-220ENST00000504687 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
LMNA-220ENST00000504687 HOXC9P31274 260 aa17.36■□□□□ 0.37
LMNA-220ENST00000504687 AMPHP49418 695 aa17.35■□□□□ 0.37
LMNA-220ENST00000504687 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
LMNA-220ENST00000504687 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
LMNA-220ENST00000504687 IP6K1Q92551 441 aa17.35■□□□□ 0.37
LMNA-220ENST00000504687 RRP7AQ9Y3A4 280 aaKnown RBP17.35■□□□□ 0.37
LMNA-220ENST00000504687 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
LMNA-220ENST00000504687 RIPK4P57078 832 aa17.34■□□□□ 0.37
LMNA-220ENST00000504687 NCAPD2Q15021 1401 aa17.34■□□□□ 0.37
LMNA-220ENST00000504687 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
LMNA-220ENST00000504687 TNS3Q68CZ2 1445 aa17.34■□□□□ 0.37
LMNA-220ENST00000504687 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.36
LMNA-220ENST00000504687 PPP4R2Q9NY27 417 aa17.33■□□□□ 0.36
LMNA-220ENST00000504687 GCP02774 474 aa17.32■□□□□ 0.36
LMNA-220ENST00000504687 HMOX1P09601 288 aa17.32■□□□□ 0.36
LMNA-220ENST00000504687 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
LMNA-220ENST00000504687 ARHGEF25Q86VW2 580 aa17.32■□□□□ 0.36
LMNA-220ENST00000504687 SULT6B1Q6IMI4 303 aa17.31■□□□□ 0.36
LMNA-220ENST00000504687 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
LMNA-220ENST00000504687 BRINP3Q76B58 766 aa17.3■□□□□ 0.36
LMNA-220ENST00000504687 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.3■□□□□ 0.36
LMNA-220ENST00000504687 COL18A1P39060 1754 aa17.3■□□□□ 0.36
LMNA-220ENST00000504687 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
LMNA-220ENST00000504687 PLEKHG2Q9H7P9 1386 aa17.29■□□□□ 0.36
LMNA-220ENST00000504687 SOS2Q07890 1332 aaPredicted RBP17.29■□□□□ 0.36
LMNA-220ENST00000504687 NUTM2GQ5VZR2 741 aa17.29■□□□□ 0.36
LMNA-220ENST00000504687 EYA1Q99502 592 aa17.29■□□□□ 0.36
LMNA-220ENST00000504687 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
LMNA-220ENST00000504687 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
LMNA-220ENST00000504687 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.36
LMNA-220ENST00000504687 ZNF853P0CG23 659 aa17.27■□□□□ 0.36
LMNA-220ENST00000504687 AEBP1Q8IUX7 1158 aa17.27■□□□□ 0.36
LMNA-220ENST00000504687 ZNF428Q96B54 188 aa17.27■□□□□ 0.36
LMNA-220ENST00000504687 IFT57Q9NWB7 429 aa17.27■□□□□ 0.36
LMNA-220ENST00000504687 CPDO75976 1380 aa17.27■□□□□ 0.35
LMNA-220ENST00000504687 FANCIQ9NVI1 1328 aa17.26■□□□□ 0.35
LMNA-220ENST00000504687 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
LMNA-220ENST00000504687 SOX12O15370 315 aa17.26■□□□□ 0.35
LMNA-220ENST00000504687 GNAI1P63096 354 aa17.24■□□□□ 0.35
LMNA-220ENST00000504687 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
LMNA-220ENST00000504687 XPCQ01831 940 aaPredicted RBP17.24■□□□□ 0.35
LMNA-220ENST00000504687 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
LMNA-220ENST00000504687 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
LMNA-220ENST00000504687 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
LMNA-220ENST00000504687 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
LMNA-220ENST00000504687 RGPD2P0DJD1 1756 aa17.23■□□□□ 0.35
LMNA-220ENST00000504687 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
LMNA-220ENST00000504687 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
LMNA-220ENST00000504687 CFAP44Q96MT7 982 aa17.22■□□□□ 0.35
LMNA-220ENST00000504687 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
LMNA-220ENST00000504687 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
LMNA-220ENST00000504687 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
LMNA-220ENST00000504687 TOM1O60784 492 aa17.19■□□□□ 0.34
LMNA-220ENST00000504687 CRB1P82279 1406 aa17.19■□□□□ 0.34
LMNA-220ENST00000504687 EXOSC9Q06265 439 aaKnown RBP17.18■□□□□ 0.34
LMNA-220ENST00000504687 MTHFSDQ2M296 383 aaKnown RBP17.18■□□□□ 0.34
LMNA-220ENST00000504687 ALDH1L2Q3SY69 923 aa17.18■□□□□ 0.34
LMNA-220ENST00000504687 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
LMNA-220ENST00000504687 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
LMNA-220ENST00000504687 ERBB3P21860 1342 aa17.18■□□□□ 0.34
LMNA-220ENST00000504687 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
LMNA-220ENST00000504687 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
LMNA-220ENST00000504687 AAMPQ13685 434 aa17.17■□□□□ 0.34
LMNA-220ENST00000504687 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
LMNA-220ENST00000504687 FBXO41Q8TF61 875 aa17.17■□□□□ 0.34
LMNA-220ENST00000504687 DDX17Q92841 729 aaKnown RBP17.17■□□□□ 0.34
LMNA-220ENST00000504687 TSR2Q969E8 191 aaKnown RBP17.17■□□□□ 0.34
LMNA-220ENST00000504687 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
LMNA-220ENST00000504687 ADAMTS7Q9UKP4 1686 aa17.16■□□□□ 0.34
LMNA-220ENST00000504687 KIAA0232Q92628 1395 aa17.16■□□□□ 0.34
LMNA-220ENST00000504687 OVOS2A0A0G2JMS6 1433 aa17.16■□□□□ 0.34
LMNA-220ENST00000504687 CHL1O00533 1208 aa17.16■□□□□ 0.34
LMNA-220ENST00000504687 BCAR3O75815 825 aa17.16■□□□□ 0.34
LMNA-220ENST00000504687 ANKRD24Q8TF21 1146 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms