RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 SNIP1Q8TAD8 396 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-217ENST00000504211 CALR3Q96L12 384 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-217ENST00000504211 VASH1Q7L8A9 365 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-217ENST00000504211 KCTD15Q96SI1 283 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-217ENST00000504211 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-217ENST00000504211 GRM5P41594 1212 aa11.81□□□□□ -0.52
UBE2D3-217ENST00000504211 SEPT12Q8IYM1 358 aa11.81□□□□□ -0.52
UBE2D3-217ENST00000504211 CYP4X1Q8N118 509 aa11.8□□□□□ -0.52
UBE2D3-217ENST00000504211 PHTF2Q8N3S3 785 aa11.8□□□□□ -0.52
UBE2D3-217ENST00000504211 UCN2Q96RP3 112 aa11.8□□□□□ -0.52
UBE2D3-217ENST00000504211 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-217ENST00000504211 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
UBE2D3-217ENST00000504211 ARID5BQ14865 1188 aa11.79□□□□□ -0.52
UBE2D3-217ENST00000504211 CCDC125Q86Z20 511 aa11.79□□□□□ -0.52
UBE2D3-217ENST00000504211 FSHRP23945 695 aa11.78□□□□□ -0.52
UBE2D3-217ENST00000504211 NR5A1Q13285 461 aa11.78□□□□□ -0.52
UBE2D3-217ENST00000504211 INTS6LQ5JSJ4 861 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-217ENST00000504211 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
UBE2D3-217ENST00000504211 CHIC2Q9UKJ5 165 aa11.78□□□□□ -0.52
UBE2D3-217ENST00000504211 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
UBE2D3-217ENST00000504211 TTC24A2A3L6 582 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-217ENST00000504211 RNF20Q5VTR2 975 aa11.77□□□□□ -0.53
UBE2D3-217ENST00000504211 J3QL48 77 aa11.76□□□□□ -0.53
UBE2D3-217ENST00000504211 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
UBE2D3-217ENST00000504211 NR3C2P08235 984 aa11.75□□□□□ -0.53
UBE2D3-217ENST00000504211 SMPD1P17405 629 aa11.75□□□□□ -0.53
UBE2D3-217ENST00000504211 RNF135Q8IUD6 432 aa11.75□□□□□ -0.53
UBE2D3-217ENST00000504211 PIK3CDO00329 1044 aa11.74□□□□□ -0.53
UBE2D3-217ENST00000504211 SERPINA10Q9UK55 444 aa11.74□□□□□ -0.53
UBE2D3-217ENST00000504211 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
UBE2D3-217ENST00000504211 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-217ENST00000504211 NNTQ13423 1086 aa11.73□□□□□ -0.53
UBE2D3-217ENST00000504211 CCDC116Q8IYX3 515 aa11.73□□□□□ -0.53
UBE2D3-217ENST00000504211 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
UBE2D3-217ENST00000504211 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-217ENST00000504211 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-217ENST00000504211 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
UBE2D3-217ENST00000504211 NRG2O14511 850 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-217ENST00000504211 ATP9BO43861 1147 aa11.71□□□□□ -0.53
UBE2D3-217ENST00000504211 MAP7D1Q3KQU3 841 aa11.71□□□□□ -0.53
UBE2D3-217ENST00000504211 TBC1D9Q6ZT07 1266 aa11.71□□□□□ -0.53
UBE2D3-217ENST00000504211 ERVH48-1M5A8F1 160 aa11.7□□□□□ -0.54
UBE2D3-217ENST00000504211 TRAF7Q6Q0C0 670 aa11.7□□□□□ -0.54
UBE2D3-217ENST00000504211 PLPP7Q8NBV4 271 aa11.7□□□□□ -0.54
UBE2D3-217ENST00000504211 PALM3A6NDB9 673 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-217ENST00000504211 SKIP12755 728 aa11.69□□□□□ -0.54
UBE2D3-217ENST00000504211 PPP1R26Q5T8A7 1209 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-217ENST00000504211 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
UBE2D3-217ENST00000504211 KLF16Q9BXK1 252 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-217ENST00000504211 MAFBQ9Y5Q3 323 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-217ENST00000504211 RAB15P59190 212 aa11.68□□□□□ -0.54
UBE2D3-217ENST00000504211 LAPTM4AQ15012 233 aa11.68□□□□□ -0.54
UBE2D3-217ENST00000504211 CFAP70Q5T0N1 1121 aa11.68□□□□□ -0.54
UBE2D3-217ENST00000504211 TFIP11Q9UBB9 837 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-217ENST00000504211 DOLKQ9UPQ8 538 aa11.68□□□□□ -0.54
UBE2D3-217ENST00000504211 PCDHB11Q9Y5F2 797 aa11.68□□□□□ -0.54
UBE2D3-217ENST00000504211 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
UBE2D3-217ENST00000504211 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
UBE2D3-217ENST00000504211 GFRA3O60609 400 aa11.67□□□□□ -0.54
UBE2D3-217ENST00000504211 TSGA10IPQ3SY00 556 aa11.67□□□□□ -0.54
UBE2D3-217ENST00000504211 HPS1Q92902 700 aa11.67□□□□□ -0.54
UBE2D3-217ENST00000504211 LZTS3O60299 673 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-217ENST00000504211 AVPP01185 164 aa11.66□□□□□ -0.54
UBE2D3-217ENST00000504211 TRIM52Q96A61 297 aa11.66□□□□□ -0.54
UBE2D3-217ENST00000504211 PGPEP1Q9NXJ5 209 aa11.66□□□□□ -0.54
UBE2D3-217ENST00000504211 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
UBE2D3-217ENST00000504211 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
UBE2D3-217ENST00000504211 FAM187AA6NFU0 413 aa11.65□□□□□ -0.54
UBE2D3-217ENST00000504211 ERVK-9P63128 1117 aa11.65□□□□□ -0.54
UBE2D3-217ENST00000504211 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
UBE2D3-217ENST00000504211 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
UBE2D3-217ENST00000504211 TMPRSS4Q9NRS4 437 aa11.65□□□□□ -0.54
UBE2D3-217ENST00000504211 DGAT1O75907 488 aa11.64□□□□□ -0.55
UBE2D3-217ENST00000504211 ZNF784Q8NCA9 323 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-217ENST00000504211 CDCA7Q9BWT1 371 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-217ENST00000504211 LILRA1O75019 489 aa11.63□□□□□ -0.55
UBE2D3-217ENST00000504211 TIMP2P16035 220 aa11.63□□□□□ -0.55
UBE2D3-217ENST00000504211 WDR4P57081 412 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-217ENST00000504211 NCOA4Q13772 614 aa11.63□□□□□ -0.55
UBE2D3-217ENST00000504211 ITPKCQ96DU7 683 aa11.62□□□□□ -0.55
UBE2D3-217ENST00000504211 IRX2Q9BZI1 471 aaPredicted RBP11.62□□□□□ -0.55
UBE2D3-217ENST00000504211 ZIC2O95409 532 aaPredicted RBP11.61□□□□□ -0.55
UBE2D3-217ENST00000504211 SCTRP47872 440 aa11.61□□□□□ -0.55
UBE2D3-217ENST00000504211 MYT1Q01538 1121 aa11.61□□□□□ -0.55
UBE2D3-217ENST00000504211 EML3Q32P44 896 aa11.61□□□□□ -0.55
UBE2D3-217ENST00000504211 OXLD1Q5BKU9 147 aa11.61□□□□□ -0.55
UBE2D3-217ENST00000504211 CC2D2BQ6DHV5 1058 aa11.61□□□□□ -0.55
UBE2D3-217ENST00000504211 LMOD1P29536 600 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-217ENST00000504211 USP4Q13107 963 aa11.6□□□□□ -0.55
UBE2D3-217ENST00000504211 PKDCCQ504Y2 493 aa11.6□□□□□ -0.55
UBE2D3-217ENST00000504211 DEPDC4Q8N2C3 294 aa11.6□□□□□ -0.55
UBE2D3-217ENST00000504211 SIRT1Q96EB6 747 aa11.6□□□□□ -0.55
UBE2D3-217ENST00000504211 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
UBE2D3-217ENST00000504211 CYLDQ9NQC7 956 aa11.6□□□□□ -0.55
UBE2D3-217ENST00000504211 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-217ENST00000504211 MYCP01106 439 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-217ENST00000504211 SRPK2P78362 688 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-217ENST00000504211 CTC1Q2NKJ3 1217 aa11.58□□□□□ -0.56
UBE2D3-217ENST00000504211 Q6ZVU0 165 aa11.58□□□□□ -0.56
UBE2D3-217ENST00000504211 CRIPAKQ8N1N5 446 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms