RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 TEX35Q5T0J7 233 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 EGFL6Q8IUX8 553 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 SIRT1Q96EB6 747 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 MED4Q9NPJ6 270 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.21□□□□□ -1.26
LINC01340-201ENST00000504012 RSPH14Q9UHP6 348 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 V9GYY5 206 aaPredicted RBP7.21□□□□□ -1.26
LINC01340-201ENST00000504012 ATAD2Q6PL18 1390 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 ANKRD36BQ8N2N9 1353 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 LAMC1P11047 1609 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 PIK3C2GO75747 1445 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 GRIN2AQ12879 1464 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 SNAPC4Q5SXM2 1469 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 CALRP27797 417 aaKnown RBP7.2□□□□□ -1.26
LINC01340-201ENST00000504012 GSCP56915 257 aaPredicted RBP7.2□□□□□ -1.26
LINC01340-201ENST00000504012 RAD51AP2Q09MP3 1159 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 NOM1Q5C9Z4 860 aaKnown RBP7.2□□□□□ -1.26
LINC01340-201ENST00000504012 CCDC91Q7Z6B0 441 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 IQUBQ8NA54 791 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 TSC1Q92574 1164 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 KIF2CQ99661 725 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 NOL10Q9BSC4 688 aaKnown RBP7.2□□□□□ -1.26
LINC01340-201ENST00000504012 TACO1Q9BSH4 297 aaKnown RBP7.2□□□□□ -1.26
LINC01340-201ENST00000504012 BSDC1Q9NW68 430 aaPredicted RBP7.2□□□□□ -1.26
LINC01340-201ENST00000504012 ADAMTS8Q9UP79 889 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 KANK1Q14678 1352 aa7.2□□□□□ -1.26
LINC01340-201ENST00000504012 A0A1B0GUL7 405 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 WDR43Q15061 677 aaKnown RBP eCLIP7.19□□□□□ -1.26
LINC01340-201ENST00000504012 MCTP1Q6DN14 999 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 AEBP1Q8IUX7 1158 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 SUGP1Q8IWZ8 645 aaKnown RBP7.19□□□□□ -1.26
LINC01340-201ENST00000504012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.19□□□□□ -1.26
LINC01340-201ENST00000504012 PIP4P2Q8N4L2 257 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 PLCD4Q9BRC7 762 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 CARD11Q9BXL7 1154 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 PSD3Q9NYI0 1048 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 KNSTRNQ9Y448 316 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 PCDHB15Q9Y5E8 787 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 KDM6BO15054 1643 aa7.19□□□□□ -1.26
LINC01340-201ENST00000504012 SYNMO15061 1565 aa7.18□□□□□ -1.26
LINC01340-201ENST00000504012 KIF3CO14782 793 aa7.18□□□□□ -1.26
LINC01340-201ENST00000504012 MAFGO15525 162 aa7.18□□□□□ -1.26
LINC01340-201ENST00000504012 HTATSF1O43719 755 aaKnown RBP7.18□□□□□ -1.26
LINC01340-201ENST00000504012 CT47B1P0C2W7 299 aaPredicted RBP7.18□□□□□ -1.26
LINC01340-201ENST00000504012 TPM4P67936 248 aa7.18□□□□□ -1.26
LINC01340-201ENST00000504012 GPS2Q13227 327 aa7.18□□□□□ -1.26
LINC01340-201ENST00000504012 BMP2KLQ5H9B9 411 aa7.18□□□□□ -1.26
LINC01340-201ENST00000504012 CCDC125Q86Z20 511 aa7.18□□□□□ -1.26
LINC01340-201ENST00000504012 GPT2Q8TD30 523 aa7.18□□□□□ -1.26
LINC01340-201ENST00000504012 GRIN2BQ13224 1484 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 KDM5DQ9BY66 1539 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 CCDC196A0A1B0GTZ2 297 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 PITPNM1O00562 1244 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 KDM4AO75164 1064 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 BCAR3O75815 825 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 GAS2L2Q8NHY3 880 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 CEP89Q96ST8 783 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 DEF6Q9H4E7 631 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 RRP7BPQ9NSQ0 103 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 TMEM63CQ9P1W3 806 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 JRKLQ9Y4A0 524 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 GPRASP1Q5JY77 1395 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 PZPP20742 1482 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 PLB1Q6P1J6 1458 aa7.17□□□□□ -1.26
LINC01340-201ENST00000504012 ST20-MTHFSA0A0A6YYL1 179 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 PATL2C9JE40 543 aaKnown RBP7.16□□□□□ -1.26
LINC01340-201ENST00000504012 APBB1O00213 710 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 PRPF40AO75400 957 aaKnown RBP7.16□□□□□ -1.26
LINC01340-201ENST00000504012 ADCY5O95622 1261 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 TUBB4AP04350 444 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 ATP2B1P20020 1258 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 MAGEA9P43362 315 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 VASPP50552 380 aaPredicted RBP7.16□□□□□ -1.26
LINC01340-201ENST00000504012 CCDC112Q8NEF3 446 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 JARID2Q92833 1246 aaPredicted RBP7.16□□□□□ -1.26
LINC01340-201ENST00000504012 ERO1AQ96HE7 468 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 KCND1Q9NSA2 647 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 ATG3Q9NT62 314 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 COG6Q9Y2V7 657 aa7.16□□□□□ -1.26
LINC01340-201ENST00000504012 COL17A1Q9UMD9 1497 aaPredicted RBP7.16□□□□□ -1.26
LINC01340-201ENST00000504012 SYCE3A1L190 88 aa7.15□□□□□ -1.26
LINC01340-201ENST00000504012 KIF2AO00139 706 aaPredicted RBP7.15□□□□□ -1.26
LINC01340-201ENST00000504012 MYO1CO00159 1063 aa7.15□□□□□ -1.26
LINC01340-201ENST00000504012 RPS6KA5O75582 802 aa7.15□□□□□ -1.26
LINC01340-201ENST00000504012 RARSP54136 660 aaKnown RBP7.15□□□□□ -1.26
LINC01340-201ENST00000504012 MAP2K1Q02750 393 aaPredicted RBP7.15□□□□□ -1.26
LINC01340-201ENST00000504012 CCDC27Q2M243 656 aa7.15□□□□□ -1.26
LINC01340-201ENST00000504012 CT47A1Q5JQC4 288 aaPredicted RBP7.15□□□□□ -1.26
LINC01340-201ENST00000504012 FBXO18Q8NFZ0 1043 aa7.15□□□□□ -1.26
LINC01340-201ENST00000504012 GOLGA5Q8TBA6 731 aa7.15□□□□□ -1.26
LINC01340-201ENST00000504012 PRDM16Q9HAZ2 1276 aa7.15□□□□□ -1.26
LINC01340-201ENST00000504012 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.15□□□□□ -1.26
LINC01340-201ENST00000504012 PTPRGP23470 1445 aa7.15□□□□□ -1.27
LINC01340-201ENST00000504012 ATAD2BQ9ULI0 1458 aa7.15□□□□□ -1.27
LINC01340-201ENST00000504012 FAM135AQ9P2D6 1515 aa7.15□□□□□ -1.27
LINC01340-201ENST00000504012 SENP3-EIF4A1A0A087X0R7 540 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 PPP1R12AO14974 1030 aaPredicted RBP7.14□□□□□ -1.27
LINC01340-201ENST00000504012 CPP00450 1065 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 IVLP07476 585 aa7.14□□□□□ -1.27
LINC01340-201ENST00000504012 ZNF853P0CG23 659 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms