RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 COL3A1P02461 1466 aaPredicted RBP6.51□□□□□ -1.37
CLDND1-208ENST00000503004 MYCNP04198 464 aaPredicted RBP6.51□□□□□ -1.37
CLDND1-208ENST00000503004 HMGB1P09429 215 aaKnown RBP6.51□□□□□ -1.37
CLDND1-208ENST00000503004 TRIM27P14373 513 aa6.51□□□□□ -1.37
CLDND1-208ENST00000503004 MVPQ14764 893 aaKnown RBP6.51□□□□□ -1.37
CLDND1-208ENST00000503004 ZKSCAN2Q63HK3 967 aa6.51□□□□□ -1.37
CLDND1-208ENST00000503004 THUMPD2Q9BTF0 503 aaKnown RBP6.51□□□□□ -1.37
CLDND1-208ENST00000503004 POLKQ9UBT6 870 aa6.51□□□□□ -1.37
CLDND1-208ENST00000503004 EMILIN1Q9Y6C2 1016 aa6.51□□□□□ -1.37
CLDND1-208ENST00000503004 A2ML1A8K2U0 1454 aa6.51□□□□□ -1.37
CLDND1-208ENST00000503004 VGLL3A8MV65 326 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 PRKAR2BP31323 418 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 SAMD1Q6SPF0 538 aaPredicted RBP6.5□□□□□ -1.37
CLDND1-208ENST00000503004 DZIP1LQ8IYY4 767 aaKnown RBP6.5□□□□□ -1.37
CLDND1-208ENST00000503004 PHACTR3Q96KR7 559 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 RIMS2Q9UQ26 1411 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 ADGRB2O60241 1585 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 DIP2BQ9P265 1576 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 METP08581 1390 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 NME9Q86XW9 330 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 ITPRIPQ8IWB1 547 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 SMAP1Q8IYB5 467 aaPredicted RBP6.5□□□□□ -1.37
CLDND1-208ENST00000503004 NECTIN2Q92692 538 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 SECISBP2LQ93073 1101 aaKnown RBP6.5□□□□□ -1.37
CLDND1-208ENST00000503004 ARID3AQ99856 593 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 PDZRN3Q9UPQ7 1066 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 USP19O94966 1318 aa6.5□□□□□ -1.37
CLDND1-208ENST00000503004 NUTM2FA1L443 756 aa6.49□□□□□ -1.37
CLDND1-208ENST00000503004 TPM2P07951 284 aa6.49□□□□□ -1.37
CLDND1-208ENST00000503004 PMFBP1Q8TBY8 1022 aa6.49□□□□□ -1.37
CLDND1-208ENST00000503004 NOB1Q9ULX3 412 aaKnown RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 CLTCQ00610 1675 aaKnown RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 PNPLA6Q8IY17 1366 aa6.49□□□□□ -1.37
CLDND1-208ENST00000503004 RRS1Q15050 365 aaKnown RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 ESF1Q9H501 851 aaKnown RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 RIMBP3CA6NJZ7 1639 aa6.49□□□□□ -1.37
CLDND1-208ENST00000503004 RIMBP3BA6NNM3 1639 aa6.49□□□□□ -1.37
CLDND1-208ENST00000503004 RIMBP3Q9UFD9 1639 aa6.49□□□□□ -1.37
CLDND1-208ENST00000503004 WASLO00401 505 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 ELL2O00472 640 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 ECM2O94769 699 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 CHRM1P11229 460 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 ATF7IPQ6VMQ6 1270 aa6.49□□□□□ -1.37
CLDND1-208ENST00000503004 GZF1Q9H116 711 aaPredicted RBP6.49□□□□□ -1.37
CLDND1-208ENST00000503004 FCHSD2O94868 740 aa6.48□□□□□ -1.37
CLDND1-208ENST00000503004 HSP90B1P14625 803 aaKnown RBP6.48□□□□□ -1.37
CLDND1-208ENST00000503004 TMEM57Q8N5G2 664 aa6.48□□□□□ -1.37
CLDND1-208ENST00000503004 RWDD1Q9H446 243 aaPredicted RBP6.48□□□□□ -1.37
CLDND1-208ENST00000503004 PPIP5K1Q6PFW1 1433 aa6.48□□□□□ -1.37
CLDND1-208ENST00000503004 PANK2Q9BZ23 570 aa6.48□□□□□ -1.37
CLDND1-208ENST00000503004 MED14O60244 1454 aa6.48□□□□□ -1.37
CLDND1-208ENST00000503004 ZMYM3Q14202 1370 aa6.47□□□□□ -1.37
CLDND1-208ENST00000503004 TEX2Q8IWB9 1127 aa6.47□□□□□ -1.37
CLDND1-208ENST00000503004 NUDT16Q96DE0 195 aaKnown RBP6.47□□□□□ -1.37
CLDND1-208ENST00000503004 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
CLDND1-208ENST00000503004 LRRC7Q96NW7 1537 aa6.47□□□□□ -1.37
CLDND1-208ENST00000503004 FAM83GA6ND36 823 aa6.47□□□□□ -1.37
CLDND1-208ENST00000503004 CT47B1P0C2W7 299 aaPredicted RBP6.47□□□□□ -1.37
CLDND1-208ENST00000503004 TSPYL6Q8N831 410 aa6.47□□□□□ -1.37
CLDND1-208ENST00000503004 SPATA31D1Q6ZQQ2 1576 aa6.46□□□□□ -1.37
CLDND1-208ENST00000503004 L1TD1Q5T7N2 865 aaKnown RBP6.46□□□□□ -1.37
CLDND1-208ENST00000503004 SLKQ9H2G2 1235 aaPredicted RBP6.46□□□□□ -1.37
CLDND1-208ENST00000503004 C1orf115Q9H7X2 142 aa6.46□□□□□ -1.37
CLDND1-208ENST00000503004 DDX19BQ9UMR2 479 aa6.46□□□□□ -1.37
CLDND1-208ENST00000503004 CCDC61Q9Y6R9 512 aa6.46□□□□□ -1.37
CLDND1-208ENST00000503004 ERBB4Q15303 1308 aa6.46□□□□□ -1.37
CLDND1-208ENST00000503004 AGLP35573 1532 aa6.46□□□□□ -1.38
CLDND1-208ENST00000503004 SOX12O15370 315 aa6.46□□□□□ -1.38
CLDND1-208ENST00000503004 XRCC6P12956 609 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLDND1-208ENST00000503004 IL13P35225 146 aa6.46□□□□□ -1.38
CLDND1-208ENST00000503004 DCTN1Q14203 1278 aa6.46□□□□□ -1.38
CLDND1-208ENST00000503004 PPP4R3BQ5MIZ7 849 aa6.46□□□□□ -1.38
CLDND1-208ENST00000503004 IL16Q14005 1332 aa6.46□□□□□ -1.38
CLDND1-208ENST00000503004 FAM135BQ49AJ0 1406 aa6.46□□□□□ -1.38
CLDND1-208ENST00000503004 ANKRD26Q9UPS8 1709 aa6.45□□□□□ -1.38
CLDND1-208ENST00000503004 COG3Q96JB2 828 aa6.45□□□□□ -1.38
CLDND1-208ENST00000503004 PRR36Q9H6K5 1346 aa6.45□□□□□ -1.38
CLDND1-208ENST00000503004 CPSF1Q10570 1443 aaKnown RBP6.45□□□□□ -1.38
CLDND1-208ENST00000503004 ATP7BP35670 1465 aa6.45□□□□□ -1.38
CLDND1-208ENST00000503004 MAP2P11137 1827 aaKnown RBP6.45□□□□□ -1.38
CLDND1-208ENST00000503004 CEBPAP49715 358 aaPredicted RBP6.45□□□□□ -1.38
CLDND1-208ENST00000503004 DMTNQ08495 405 aa6.45□□□□□ -1.38
CLDND1-208ENST00000503004 NFE2L2Q16236 605 aa6.45□□□□□ -1.38
CLDND1-208ENST00000503004 ZBTB40Q9NUA8 1239 aa6.45□□□□□ -1.38
CLDND1-208ENST00000503004 NRXN3Q9Y4C0 1643 aa6.45□□□□□ -1.38
CLDND1-208ENST00000503004 SETD1AO15047 1707 aaKnown RBP6.45□□□□□ -1.38
CLDND1-208ENST00000503004 RGL2O15211 777 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 CPS1P31327 1500 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 UTP14CQ5TAP6 766 aaKnown RBP6.44□□□□□ -1.38
CLDND1-208ENST00000503004 EDC4Q6P2E9 1401 aaKnown RBP6.44□□□□□ -1.38
CLDND1-208ENST00000503004 AEBP1Q8IUX7 1158 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.44□□□□□ -1.38
CLDND1-208ENST00000503004 KIF16BQ96L93 1317 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 KIF20BQ96Q89 1820 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 DLC1Q96QB1 1528 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 SLC26A8Q96RN1 970 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 MBIPQ9NS73 344 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 VAMP4O75379 141 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 LTKP29376 864 aa6.44□□□□□ -1.38
CLDND1-208ENST00000503004 REREQ9P2R6 1566 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms