RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 SEPT12Q8IYM1 358 aa10.42□□□□□ -0.74
CHCHD3-206ENST00000496427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.747e-7■■■□□ 17.9
CHCHD3-206ENST00000496427 PHRF1Q9P1Y6 1649 aaKnown RBP10.42□□□□□ -0.74
CHCHD3-206ENST00000496427 ADGRB2O60241 1585 aa10.42□□□□□ -0.74
CHCHD3-206ENST00000496427 PSEN1P49768 467 aa10.41□□□□□ -0.74
CHCHD3-206ENST00000496427 HAP1P54257 671 aaPredicted RBP10.41□□□□□ -0.74
CHCHD3-206ENST00000496427 MARVELD3Q96A59 401 aa10.41□□□□□ -0.74
CHCHD3-206ENST00000496427 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
CHCHD3-206ENST00000496427 ITSN1Q15811 1721 aa10.41□□□□□ -0.74
CHCHD3-206ENST00000496427 THSD7AQ9UPZ6 1657 aa10.41□□□□□ -0.74
CHCHD3-206ENST00000496427 ANKRD30BQ9BXX2 1392 aa10.4□□□□□ -0.74
CHCHD3-206ENST00000496427 SAFB2Q14151 953 aaKnown RBP eCLIP10.4□□□□□ -0.744e-6■■■■□ 19.9
CHCHD3-206ENST00000496427 ARHGEF28Q8N1W1 1705 aaKnown RBP10.39□□□□□ -0.75
CHCHD3-206ENST00000496427 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
CHCHD3-206ENST00000496427 VPS72Q15906 364 aa10.39□□□□□ -0.75
CHCHD3-206ENST00000496427 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
CHCHD3-206ENST00000496427 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
CHCHD3-206ENST00000496427 RREB1Q92766 1687 aa10.38□□□□□ -0.75
CHCHD3-206ENST00000496427 A0A0G2JS52 829 aa10.38□□□□□ -0.75
CHCHD3-206ENST00000496427 EMP3P54852 163 aa10.38□□□□□ -0.75
CHCHD3-206ENST00000496427 MYT1Q01538 1121 aa10.38□□□□□ -0.75
CHCHD3-206ENST00000496427 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
CHCHD3-206ENST00000496427 NUP188Q5SRE5 1749 aa10.38□□□□□ -0.75
CHCHD3-206ENST00000496427 PDAP1Q13442 181 aaKnown RBP10.37□□□□□ -0.75
CHCHD3-206ENST00000496427 KRT27Q7Z3Y8 459 aa10.37□□□□□ -0.75
CHCHD3-206ENST00000496427 PMFBP1Q8TBY8 1022 aa10.37□□□□□ -0.75
CHCHD3-206ENST00000496427 DLC1Q96QB1 1528 aa10.37□□□□□ -0.75
CHCHD3-206ENST00000496427 SBNO1A3KN83 1393 aa10.37□□□□□ -0.75
CHCHD3-206ENST00000496427 ADGRB1O14514 1584 aa10.36□□□□□ -0.75
CHCHD3-206ENST00000496427 FAM98CQ17RN3 349 aaKnown RBP10.36□□□□□ -0.75
CHCHD3-206ENST00000496427 CFAP70Q5T0N1 1121 aa10.36□□□□□ -0.75
CHCHD3-206ENST00000496427 FAM182BQ5T319 152 aa10.36□□□□□ -0.75
CHCHD3-206ENST00000496427 MPHOSPH9Q99550 1183 aa10.36□□□□□ -0.75
CHCHD3-206ENST00000496427 ARHGEF10O15013 1369 aa10.36□□□□□ -0.75
CHCHD3-206ENST00000496427 TOPAZ1Q8N9V7 1692 aa10.35□□□□□ -0.75
CHCHD3-206ENST00000496427 TULP4Q9NRJ4 1543 aa10.35□□□□□ -0.75
CHCHD3-206ENST00000496427 FAM83GA6ND36 823 aa10.35□□□□□ -0.75
CHCHD3-206ENST00000496427 PSME1Q06323 249 aa10.35□□□□□ -0.75
CHCHD3-206ENST00000496427 PRAM1Q96QH2 718 aa10.35□□□□□ -0.75
CHCHD3-206ENST00000496427 DHX57Q6P158 1386 aaKnown RBP10.35□□□□□ -0.75
CHCHD3-206ENST00000496427 ANKARQ7Z5J8 1434 aa10.34□□□□□ -0.75
CHCHD3-206ENST00000496427 G3V3G9 751 aa10.34□□□□□ -0.75
CHCHD3-206ENST00000496427 C14orf93Q9H972 538 aaKnown RBP10.34□□□□□ -0.75
CHCHD3-206ENST00000496427 ONECUT3O60422 494 aaPredicted RBP10.33□□□□□ -0.76
CHCHD3-206ENST00000496427 HRCP23327 699 aa10.33□□□□□ -0.76
CHCHD3-206ENST00000496427 BAG6P46379 1132 aa10.33□□□□□ -0.76
CHCHD3-206ENST00000496427 EN1Q05925 392 aaPredicted RBP10.33□□□□□ -0.76
CHCHD3-206ENST00000496427 HIRIP3Q9BW71 556 aaPredicted RBP10.33□□□□□ -0.76
CHCHD3-206ENST00000496427 BTG4Q9NY30 223 aa10.33□□□□□ -0.76
CHCHD3-206ENST00000496427 PRR36Q9H6K5 1346 aa10.33□□□□□ -0.76
CHCHD3-206ENST00000496427 SBF2Q86WG5 1849 aa10.32□□□□□ -0.76
CHCHD3-206ENST00000496427 WNK3Q9BYP7 1800 aa10.32□□□□□ -0.76
CHCHD3-206ENST00000496427 MINK1Q8N4C8 1332 aaPredicted RBP10.32□□□□□ -0.76
CHCHD3-206ENST00000496427 NRKQ7Z2Y5 1582 aa10.31□□□□□ -0.76
CHCHD3-206ENST00000496427 SIRT1Q96EB6 747 aa10.31□□□□□ -0.76
CHCHD3-206ENST00000496427 HS3ST6Q96QI5 342 aa10.31□□□□□ -0.76
CHCHD3-206ENST00000496427 POGKQ9P215 609 aa10.31□□□□□ -0.76
CHCHD3-206ENST00000496427 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
CHCHD3-206ENST00000496427 TRAK1Q9UPV9 953 aa10.3□□□□□ -0.76
CHCHD3-206ENST00000496427 LMO7Q8WWI1 1683 aa10.3□□□□□ -0.76
CHCHD3-206ENST00000496427 SPATA31A5Q5VU36 1347 aa10.3□□□□□ -0.76
CHCHD3-206ENST00000496427 SPATA31A7Q8IWB4 1347 aa10.3□□□□□ -0.76
CHCHD3-206ENST00000496427 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
CHCHD3-206ENST00000496427 ATP7BP35670 1465 aa10.3□□□□□ -0.76
CHCHD3-206ENST00000496427 CAMTA1Q9Y6Y1 1673 aa10.29□□□□□ -0.76
CHCHD3-206ENST00000496427 DISP2A7MBM2 1401 aa10.29□□□□□ -0.76
CHCHD3-206ENST00000496427 PARP4Q9UKK3 1724 aaKnown RBP10.29□□□□□ -0.76
CHCHD3-206ENST00000496427 RGPD5Q99666 1765 aa10.29□□□□□ -0.76
CHCHD3-206ENST00000496427 GPRASP1Q5JY77 1395 aa10.28□□□□□ -0.76
CHCHD3-206ENST00000496427 FAM205CA6NFA0 338 aa10.28□□□□□ -0.76
CHCHD3-206ENST00000496427 EZH2Q15910 746 aaKnown RBP10.28□□□□□ -0.76
CHCHD3-206ENST00000496427 SPOCK2Q92563 424 aa10.28□□□□□ -0.76
CHCHD3-206ENST00000496427 BOLA1Q9Y3E2 137 aa10.28□□□□□ -0.76
CHCHD3-206ENST00000496427 AKAP12Q02952 1782 aa10.28□□□□□ -0.76
CHCHD3-206ENST00000496427 KIAA0232Q92628 1395 aa10.27□□□□□ -0.76
CHCHD3-206ENST00000496427 CHRNA2Q15822 529 aa10.27□□□□□ -0.77
CHCHD3-206ENST00000496427 CABP2Q9NPB3 220 aa10.27□□□□□ -0.77
CHCHD3-206ENST00000496427 PRDM11Q9NQV5 511 aa10.26□□□□□ -0.77
CHCHD3-206ENST00000496427 STRN4Q9NRL3 753 aa10.26□□□□□ -0.77
CHCHD3-206ENST00000496427 EIF3AQ14152 1382 aaKnown RBP10.26□□□□□ -0.77
CHCHD3-206ENST00000496427 LRRC37A3O60309 1634 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 PEAK1Q9H792 1746 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 RGPD3A6NKT7 1758 aaPredicted RBP10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 RGPD4Q7Z3J3 1758 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 WASLO00401 505 aaPredicted RBP10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 TRIM37O94972 964 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 NUTM2GQ5VZR2 741 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 NGDNQ8NEJ9 315 aaKnown RBP10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 CIZ1Q9ULV3 898 aaPredicted RBP10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 KDM2AQ9Y2K7 1162 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 SPATA31A1Q5TZJ5 1347 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 QRICH2Q9H0J4 1663 aa10.25□□□□□ -0.77
CHCHD3-206ENST00000496427 KIAA1210Q9ULL0 1709 aa10.24□□□□□ -0.77
CHCHD3-206ENST00000496427 CASZ1Q86V15 1759 aa10.24□□□□□ -0.77
CHCHD3-206ENST00000496427 USP35Q9P2H5 1018 aa10.24□□□□□ -0.77
CHCHD3-206ENST00000496427 RAB3GAP2Q9H2M9 1393 aa10.24□□□□□ -0.77
CHCHD3-206ENST00000496427 SSH2Q76I76 1423 aa10.24□□□□□ -0.77
CHCHD3-206ENST00000496427 ZC3H6P61129 1189 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms