RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 NEUROD2Q15784 382 aa27.57■■■□□ 2
FGFR1-223ENST00000496296 SBNO1A3KN83 1393 aa27.56■■■□□ 2
FGFR1-223ENST00000496296 KRT28Q7Z3Y7 464 aa27.56■■■□□ 2
FGFR1-223ENST00000496296 E9PSI1 815 aa27.55■■■□□ 2
FGFR1-223ENST00000496296 AMPHP49418 695 aa27.55■■■□□ 2
FGFR1-223ENST00000496296 CCDC27Q2M243 656 aa27.55■■■□□ 2
FGFR1-223ENST00000496296 WWC1Q8IX03 1113 aa27.55■■■□□ 2
FGFR1-223ENST00000496296 FLT4P35916 1363 aa27.55■■■□□ 2
FGFR1-223ENST00000496296 TOM1O60784 492 aa27.55■■■□□ 2
FGFR1-223ENST00000496296 RRP7AQ9Y3A4 280 aaKnown RBP27.55■■■□□ 2
FGFR1-223ENST00000496296 KIF24Q5T7B8 1368 aa27.54■■■□□ 2
FGFR1-223ENST00000496296 RSPH6AQ9H0K4 717 aa27.53■■■□□ 2
FGFR1-223ENST00000496296 MARF1Q9Y4F3 1742 aaKnown RBP27.53■■■□□ 2
FGFR1-223ENST00000496296 XPCQ01831 940 aaPredicted RBP27.53■■■□□ 2
FGFR1-223ENST00000496296 KCNH5Q8NCM2 988 aa27.53■■■□□ 2
FGFR1-223ENST00000496296 PHF23Q9BUL5 403 aaPredicted RBP27.53■■■□□ 2
FGFR1-223ENST00000496296 EIF4A2Q14240 407 aaKnown RBP27.52■■■□□ 2
FGFR1-223ENST00000496296 PEAK1Q9H792 1746 aa27.52■■■□□ 2
FGFR1-223ENST00000496296 PRKAR2BP31323 418 aa27.51■■□□□ 1.99
FGFR1-223ENST00000496296 HSP90AB2PQ58FF8 381 aa27.51■■□□□ 1.99
FGFR1-223ENST00000496296 PIP4K2BP78356 416 aa27.51■■□□□ 1.99
FGFR1-223ENST00000496296 HMOX1P09601 288 aa27.5■■□□□ 1.99
FGFR1-223ENST00000496296 WDR63Q8IWG1 891 aa27.5■■□□□ 1.99
FGFR1-223ENST00000496296 ANP32EQ9BTT0 268 aa27.5■■□□□ 1.99
FGFR1-223ENST00000496296 NPHP3Q7Z494 1330 aa27.5■■□□□ 1.99
FGFR1-223ENST00000496296 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
FGFR1-223ENST00000496296 LMOD2Q6P5Q4 547 aa27.49■■□□□ 1.99
FGFR1-223ENST00000496296 TRPM3Q9HCF6 1732 aaPredicted RBP27.48■■□□□ 1.99
FGFR1-223ENST00000496296 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.48■■□□□ 1.99
FGFR1-223ENST00000496296 PLIN1O60240 522 aa27.47■■□□□ 1.99
FGFR1-223ENST00000496296 SPINK5Q9NQ38 1064 aaPredicted RBP27.47■■□□□ 1.99
FGFR1-223ENST00000496296 RTL1A6NKG5 1358 aa27.46■■□□□ 1.99
FGFR1-223ENST00000496296 CRBNQ96SW2 442 aa27.46■■□□□ 1.99
FGFR1-223ENST00000496296 HOXC9P31274 260 aa27.44■■□□□ 1.98
FGFR1-223ENST00000496296 RIPK4P57078 832 aa27.44■■□□□ 1.98
FGFR1-223ENST00000496296 SLAIN2Q9P270 581 aa27.42■■□□□ 1.98
FGFR1-223ENST00000496296 NFAT5O94916 1531 aa27.42■■□□□ 1.98
FGFR1-223ENST00000496296 SULT6B1Q6IMI4 303 aa27.41■■□□□ 1.98
FGFR1-223ENST00000496296 ARHGEF10O15013 1369 aa27.41■■□□□ 1.98
FGFR1-223ENST00000496296 SLIT3O75094 1523 aa27.41■■□□□ 1.98
FGFR1-223ENST00000496296 GCP02774 474 aa27.4■■□□□ 1.98
FGFR1-223ENST00000496296 USP19O94966 1318 aa27.4■■□□□ 1.98
FGFR1-223ENST00000496296 NFE2L2Q16236 605 aa27.4■■□□□ 1.98
FGFR1-223ENST00000496296 BRINP3Q76B58 766 aa27.4■■□□□ 1.98
FGFR1-223ENST00000496296 PHACTR3Q96KR7 559 aa27.39■■□□□ 1.98
FGFR1-223ENST00000496296 RGPD1P0DJD0 1748 aa27.39■■□□□ 1.97
FGFR1-223ENST00000496296 IP6K1Q92551 441 aa27.38■■□□□ 1.97
FGFR1-223ENST00000496296 MYH16Q9H6N6 1097 aa27.38■■□□□ 1.97
FGFR1-223ENST00000496296 TRIM35Q9UPQ4 493 aa27.38■■□□□ 1.97
FGFR1-223ENST00000496296 ALS2Q96Q42 1657 aa27.38■■□□□ 1.97
FGFR1-223ENST00000496296 LTN1O94822 1766 aa27.38■■□□□ 1.97
FGFR1-223ENST00000496296 TCERG1O14776 1098 aaKnown RBP27.38■■□□□ 1.97
FGFR1-223ENST00000496296 C20orf194Q5TEA3 1177 aa27.38■■□□□ 1.97
FGFR1-223ENST00000496296 DDX17Q92841 729 aaKnown RBP27.38■■□□□ 1.97
FGFR1-223ENST00000496296 TNS3Q68CZ2 1445 aa27.35■■□□□ 1.97
FGFR1-223ENST00000496296 PXDNQ92626 1479 aa27.35■■□□□ 1.97
FGFR1-223ENST00000496296 LMOD3Q0VAK6 560 aa27.35■■□□□ 1.97
FGFR1-223ENST00000496296 AEBP1Q8IUX7 1158 aa27.35■■□□□ 1.97
FGFR1-223ENST00000496296 IL16Q14005 1332 aa27.34■■□□□ 1.97
FGFR1-223ENST00000496296 IGSF1Q8N6C5 1336 aa27.34■■□□□ 1.97
FGFR1-223ENST00000496296 ZBTB7CA1YPR0 619 aa27.34■■□□□ 1.97
FGFR1-223ENST00000496296 MS4A1P11836 297 aa27.34■■□□□ 1.97
FGFR1-223ENST00000496296 PHRF1Q9P1Y6 1649 aaKnown RBP27.33■■□□□ 1.97
FGFR1-223ENST00000496296 PLEKHG5O94827 1062 aa27.33■■□□□ 1.97
FGFR1-223ENST00000496296 EYA1Q99502 592 aa27.33■■□□□ 1.97
FGFR1-223ENST00000496296 CALD1Q05682 793 aaKnown RBP27.32■■□□□ 1.96
FGFR1-223ENST00000496296 ARHGEF25Q86VW2 580 aa27.32■■□□□ 1.96
FGFR1-223ENST00000496296 SPATA31A3Q5VYP0 1347 aa27.32■■□□□ 1.96
FGFR1-223ENST00000496296 KDM2BQ8NHM5 1336 aa27.32■■□□□ 1.96
FGFR1-223ENST00000496296 HSPA1LP34931 641 aa27.32■■□□□ 1.96
FGFR1-223ENST00000496296 KDRP35968 1356 aa27.31■■□□□ 1.96
FGFR1-223ENST00000496296 LTV1Q96GA3 475 aaPredicted RBP27.31■■□□□ 1.96
FGFR1-223ENST00000496296 MSH5O43196 834 aa27.29■■□□□ 1.96
FGFR1-223ENST00000496296 PDE3AQ14432 1141 aa27.29■■□□□ 1.96
FGFR1-223ENST00000496296 MED1Q15648 1581 aaPredicted RBP27.27■■□□□ 1.96
FGFR1-223ENST00000496296 SOS2Q07890 1332 aaPredicted RBP27.26■■□□□ 1.95
FGFR1-223ENST00000496296 CENPQQ7L2Z9 268 aaPredicted RBP27.25■■□□□ 1.95
FGFR1-223ENST00000496296 BCAR3O75815 825 aa27.25■■□□□ 1.95
FGFR1-223ENST00000496296 ZC3H6P61129 1189 aaKnown RBP27.22■■□□□ 1.95
FGFR1-223ENST00000496296 CT47B1P0C2W7 299 aaPredicted RBP27.21■■□□□ 1.95
FGFR1-223ENST00000496296 GAS2L2Q8NHY3 880 aa27.21■■□□□ 1.95
FGFR1-223ENST00000496296 DLG5Q8TDM6 1919 aa27.2■■□□□ 1.94
FGFR1-223ENST00000496296 RARSP54136 660 aaKnown RBP27.19■■□□□ 1.94
FGFR1-223ENST00000496296 GNAI1P63096 354 aa27.19■■□□□ 1.94
FGFR1-223ENST00000496296 TSR2Q969E8 191 aaKnown RBP27.19■■□□□ 1.94
FGFR1-223ENST00000496296 ROBO1Q9Y6N7 1651 aa27.19■■□□□ 1.94
FGFR1-223ENST00000496296 ANKRD24Q8TF21 1146 aa27.19■■□□□ 1.94
FGFR1-223ENST00000496296 AAMPQ13685 434 aa27.18■■□□□ 1.94
FGFR1-223ENST00000496296 CABLES1Q8TDN4 633 aa27.18■■□□□ 1.94
FGFR1-223ENST00000496296 IFT57Q9NWB7 429 aa27.18■■□□□ 1.94
FGFR1-223ENST00000496296 MTHFSDQ2M296 383 aaKnown RBP27.17■■□□□ 1.94
FGFR1-223ENST00000496296 NBPF6Q5VWK0 638 aa27.17■■□□□ 1.94
FGFR1-223ENST00000496296 NBPF4Q96M43 638 aa27.17■■□□□ 1.94
FGFR1-223ENST00000496296 NHSL1Q5SYE7 1610 aa27.17■■□□□ 1.94
FGFR1-223ENST00000496296 LAS1LQ9Y4W2 734 aaKnown RBP27.17■■□□□ 1.94
FGFR1-223ENST00000496296 THUMPD2Q9BTF0 503 aaKnown RBP27.16■■□□□ 1.94
FGFR1-223ENST00000496296 RTF1Q92541 710 aaKnown RBP27.15■■□□□ 1.94
FGFR1-223ENST00000496296 FAM83GA6ND36 823 aa27.15■■□□□ 1.94
FGFR1-223ENST00000496296 EXOSC9Q06265 439 aaKnown RBP27.15■■□□□ 1.94
FGFR1-223ENST00000496296 USHBP1Q8N6Y0 703 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms