RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 ATF7IPQ6VMQ6 1270 aa15.23■□□□□ 0.03
HCN3-204ENST00000496230 ANKLE2Q86XL3 938 aa15.23■□□□□ 0.03
HCN3-204ENST00000496230 PHF23Q9BUL5 403 aaPredicted RBP15.23■□□□□ 0.03
HCN3-204ENST00000496230 AGLP35573 1532 aa15.22■□□□□ 0.03
HCN3-204ENST00000496230 SPATA31D1Q6ZQQ2 1576 aa15.22■□□□□ 0.03
HCN3-204ENST00000496230 MVPQ14764 893 aaKnown RBP15.22■□□□□ 0.03
HCN3-204ENST00000496230 LNPKQ9C0E8 428 aa15.22■□□□□ 0.03
HCN3-204ENST00000496230 PNNQ9H307 717 aaKnown RBP15.21■□□□□ 0.03
HCN3-204ENST00000496230 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.02
HCN3-204ENST00000496230 NLRP1Q9C000 1473 aa15.2■□□□□ 0.02
HCN3-204ENST00000496230 SHPRHQ149N8 1683 aa15.2■□□□□ 0.02
HCN3-204ENST00000496230 CCDC27Q2M243 656 aa15.2■□□□□ 0.02
HCN3-204ENST00000496230 LRRC59Q96AG4 307 aaKnown RBP15.2■□□□□ 0.02
HCN3-204ENST00000496230 EYA1Q99502 592 aa15.19■□□□□ 0.02
HCN3-204ENST00000496230 MTHFSDQ2M296 383 aaKnown RBP15.19■□□□□ 0.02
HCN3-204ENST00000496230 EDC4Q6P2E9 1401 aaKnown RBP15.19■□□□□ 0.02
HCN3-204ENST00000496230 RTF1Q92541 710 aaKnown RBP15.19■□□□□ 0.02
HCN3-204ENST00000496230 TBX22Q9Y458 520 aa15.19■□□□□ 0.02
HCN3-204ENST00000496230 F6X3S4 739 aa15.19■□□□□ 0.02
HCN3-204ENST00000496230 VAMP4O75379 141 aa15.19■□□□□ 0.02
HCN3-204ENST00000496230 ZC3H6P61129 1189 aaKnown RBP15.19■□□□□ 0.02
HCN3-204ENST00000496230 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
HCN3-204ENST00000496230 MAP2P11137 1827 aaKnown RBP15.18■□□□□ 0.02
HCN3-204ENST00000496230 FAM161AQ3B820 660 aa15.18■□□□□ 0.02
HCN3-204ENST00000496230 PROSER2Q86WR7 435 aaPredicted RBP15.17■□□□□ 0.02
HCN3-204ENST00000496230 NGEFQ8N5V2 710 aa15.17■□□□□ 0.02
HCN3-204ENST00000496230 CABLES1Q8TDN4 633 aa15.17■□□□□ 0.02
HCN3-204ENST00000496230 RWDD1Q9H446 243 aaPredicted RBP15.17■□□□□ 0.02
HCN3-204ENST00000496230 CPSF1Q10570 1443 aaKnown RBP15.16■□□□□ 0.02
HCN3-204ENST00000496230 GNAI1P63096 354 aa15.16■□□□□ 0.02
HCN3-204ENST00000496230 PHF8Q9UPP1 1060 aa15.16■□□□□ 0.02
HCN3-204ENST00000496230 PLEKHG1Q9ULL1 1385 aa15.16■□□□□ 0.02
HCN3-204ENST00000496230 EIF2S2P20042 333 aaKnown RBP15.16■□□□□ 0.02
HCN3-204ENST00000496230 ANKRD45Q5TZF3 282 aa15.16■□□□□ 0.02
HCN3-204ENST00000496230 UBE2Q2Q8WVN8 375 aa15.15■□□□□ 0.02
HCN3-204ENST00000496230 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
HCN3-204ENST00000496230 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
HCN3-204ENST00000496230 MFAP1P55081 439 aaKnown RBP15.15■□□□□ 0.02
HCN3-204ENST00000496230 ATP7BP35670 1465 aa15.14■□□□□ 0.01
HCN3-204ENST00000496230 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
HCN3-204ENST00000496230 PLEKHG3A1L390 1219 aa15.14■□□□□ 0.01
HCN3-204ENST00000496230 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
HCN3-204ENST00000496230 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
HCN3-204ENST00000496230 MS4A1P11836 297 aa15.14■□□□□ 0.01
HCN3-204ENST00000496230 NRXN3Q9Y4C0 1643 aa15.14■□□□□ 0.01
HCN3-204ENST00000496230 PNPLA6Q8IY17 1366 aa15.14■□□□□ 0.01
HCN3-204ENST00000496230 ANXA1P04083 346 aa15.13■□□□□ 0.01
HCN3-204ENST00000496230 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
HCN3-204ENST00000496230 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
HCN3-204ENST00000496230 COL3A1P02461 1466 aaPredicted RBP15.12■□□□□ 0.01
HCN3-204ENST00000496230 G2E3Q7L622 706 aa15.12■□□□□ 0.01
HCN3-204ENST00000496230 CFAP44Q96MT7 982 aa15.12■□□□□ 0.01
HCN3-204ENST00000496230 DDX19BQ9UMR2 479 aa15.12■□□□□ 0.01
HCN3-204ENST00000496230 USP6P35125 1406 aa15.11■□□□□ 0.01
HCN3-204ENST00000496230 MRPL50Q8N5N7 158 aaKnown RBP15.1■□□□□ 0.01
HCN3-204ENST00000496230 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.1■□□□□ 0.01
HCN3-204ENST00000496230 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
HCN3-204ENST00000496230 HOXC9P31274 260 aa15.09■□□□□ 0.01
HCN3-204ENST00000496230 CHRNA2Q15822 529 aa15.09■□□□□ 0.01
HCN3-204ENST00000496230 IFT57Q9NWB7 429 aa15.09■□□□□ 0.01
HCN3-204ENST00000496230 FAM135BQ49AJ0 1406 aa15.09■□□□□ 0.01
HCN3-204ENST00000496230 SMARCA5O60264 1052 aaPredicted RBP15.08■□□□□ 0.01
HCN3-204ENST00000496230 NBPF6Q5VWK0 638 aa15.08■□□□□ 0.01
HCN3-204ENST00000496230 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0.01
HCN3-204ENST00000496230 NBPF4Q96M43 638 aa15.08■□□□□ 0.01
HCN3-204ENST00000496230 LGR6Q9HBX8 967 aa15.08■□□□□ 0.01
HCN3-204ENST00000496230 UBR1Q8IWV7 1749 aa15.08■□□□□ 0
HCN3-204ENST00000496230 RTL5Q5HYW3 569 aaPredicted RBP15.08■□□□□ 0
HCN3-204ENST00000496230 KIF16BQ96L93 1317 aa15.08■□□□□ 0
HCN3-204ENST00000496230 ZBTB40Q9NUA8 1239 aa15.07■□□□□ 0
HCN3-204ENST00000496230 ARXQ96QS3 562 aa15.07■□□□□ 0
HCN3-204ENST00000496230 CALD1Q05682 793 aaKnown RBP15.07■□□□□ 0
HCN3-204ENST00000496230 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
HCN3-204ENST00000496230 KCNQ3O43525 872 aa15.06■□□□□ 0
HCN3-204ENST00000496230 SIRT1Q96EB6 747 aa15.06■□□□□ 0
HCN3-204ENST00000496230 DLC1Q96QB1 1528 aa15.06■□□□□ 0
HCN3-204ENST00000496230 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ 0
HCN3-204ENST00000496230 TSHZ3Q63HK5 1081 aa15.05■□□□□ 0
HCN3-204ENST00000496230 FOXD4L1Q9NU39 408 aa15.05■□□□□ -0
HCN3-204ENST00000496230 RGPD8O14715 1765 aaPredicted RBP15.05■□□□□ -0
HCN3-204ENST00000496230 PIP4K2AP48426 406 aaPredicted RBP15.05■□□□□ -0
HCN3-204ENST00000496230 MEIS3Q99687 375 aa15.05■□□□□ -0
HCN3-204ENST00000496230 REREQ9P2R6 1566 aa15.05■□□□□ -0
HCN3-204ENST00000496230 ZBTB7BO15156 539 aaPredicted RBP15.04■□□□□ -0
HCN3-204ENST00000496230 CSB-PGBD3P0DP91 1061 aa15.04■□□□□ -0
HCN3-204ENST00000496230 USP35Q9P2H5 1018 aa15.04■□□□□ -0
HCN3-204ENST00000496230 IL17REQ8NFR9 667 aa15.04■□□□□ -0
HCN3-204ENST00000496230 C3P01024 1663 aa15.04■□□□□ -0
HCN3-204ENST00000496230 NLRP2Q9NX02 1062 aa15.04■□□□□ -0
HCN3-204ENST00000496230 AXIN2Q9Y2T1 843 aa15.04■□□□□ -0
HCN3-204ENST00000496230 SIRT2Q8IXJ6 389 aa15.03■□□□□ -0
HCN3-204ENST00000496230 OTUD7AQ8TE49 926 aaPredicted RBP15.03■□□□□ -0
HCN3-204ENST00000496230 IL16Q14005 1332 aa15.03■□□□□ -0
HCN3-204ENST00000496230 ZNF853P0CG23 659 aa15.03■□□□□ -0
HCN3-204ENST00000496230 GCP02774 474 aa15.02■□□□□ -0
HCN3-204ENST00000496230 KRT28Q7Z3Y7 464 aa15.02□□□□□ -0.01
HCN3-204ENST00000496230 GNAT3A8MTJ3 354 aa15.02□□□□□ -0.01
HCN3-204ENST00000496230 PHAXQ9H814 394 aaKnown RBP15.02□□□□□ -0.01
HCN3-204ENST00000496230 SETD1AO15047 1707 aaKnown RBP15.01□□□□□ -0.01
HCN3-204ENST00000496230 CDC42BPGQ6DT37 1551 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms