RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 ABTB2Q8N961 1025 aa15.07■□□□□ 0
HDLBP-245ENST00000494862 RSPH6AQ9H0K4 717 aa15.07■□□□□ 0
HDLBP-245ENST00000494862 RRP7AQ9Y3A4 280 aaKnown RBP15.07■□□□□ 0
HDLBP-245ENST00000494862 USP54Q70EL1 1684 aa15.06■□□□□ 0
HDLBP-245ENST00000494862 STRCP1A6NGW2 1772 aa15.06■□□□□ 0
HDLBP-245ENST00000494862 STRCQ7RTU9 1775 aa15.06■□□□□ 0
HDLBP-245ENST00000494862 SOCS7O14512 581 aa15.06■□□□□ 0
HDLBP-245ENST00000494862 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
HDLBP-245ENST00000494862 TMPOP42166 694 aaKnown RBP15.06■□□□□ 0
HDLBP-245ENST00000494862 ORAI2Q96SN7 254 aa15.06■□□□□ 0
HDLBP-245ENST00000494862 CADPS2Q86UW7 1296 aa15.05■□□□□ -0
HDLBP-245ENST00000494862 MAP3K19Q56UN5 1328 aa15.05■□□□□ -0
HDLBP-245ENST00000494862 SBNO1A3KN83 1393 aa15.05■□□□□ -0
HDLBP-245ENST00000494862 KIF24Q5T7B8 1368 aa15.05■□□□□ -0
HDLBP-245ENST00000494862 MST1RQ04912 1400 aa15.04■□□□□ -0
HDLBP-245ENST00000494862 CAPN15O75808 1086 aa15.04■□□□□ -0
HDLBP-245ENST00000494862 NEFMP07197 916 aa15.04■□□□□ -0
HDLBP-245ENST00000494862 IRX6P78412 446 aaPredicted RBP15.04■□□□□ -0
HDLBP-245ENST00000494862 EIF4A2Q14240 407 aaKnown RBP15.04■□□□□ -0
HDLBP-245ENST00000494862 NEUROD2Q15784 382 aa15.04■□□□□ -0
HDLBP-245ENST00000494862 KIF1AQ12756 1690 aa15.03■□□□□ -0
HDLBP-245ENST00000494862 FLT4P35916 1363 aa15.03■□□□□ -0
HDLBP-245ENST00000494862 MSH6P52701 1360 aa15.03■□□□□ -0
HDLBP-245ENST00000494862 PRKAR2BP31323 418 aa15.03■□□□□ -0
HDLBP-245ENST00000494862 RRP1P56182 461 aaKnown RBP15.03■□□□□ -0
HDLBP-245ENST00000494862 SOX12O15370 315 aa15.02■□□□□ -0
HDLBP-245ENST00000494862 FOXO3O43524 673 aa15.02■□□□□ -0
HDLBP-245ENST00000494862 AMPHP49418 695 aa15.02■□□□□ -0
HDLBP-245ENST00000494862 NUTM2GQ5VZR2 741 aa15.02■□□□□ -0
HDLBP-245ENST00000494862 PEAK1Q9H792 1746 aa15.01□□□□□ -0.01
HDLBP-245ENST00000494862 HMOX1P09601 288 aa15.01□□□□□ -0.01
HDLBP-245ENST00000494862 HSP90AB2PQ58FF8 381 aa15.01□□□□□ -0.01
HDLBP-245ENST00000494862 KRT28Q7Z3Y7 464 aa15.01□□□□□ -0.01
HDLBP-245ENST00000494862 IL16Q14005 1332 aa15□□□□□ -0.01
HDLBP-245ENST00000494862 RIPK4P57078 832 aa15□□□□□ -0.01
HDLBP-245ENST00000494862 NFE2L2Q16236 605 aa15□□□□□ -0.01
HDLBP-245ENST00000494862 KCNH5Q8NCM2 988 aa15□□□□□ -0.01
HDLBP-245ENST00000494862 TRIM35Q9UPQ4 493 aa15□□□□□ -0.01
HDLBP-245ENST00000494862 MARF1Q9Y4F3 1742 aaKnown RBP15□□□□□ -0.01
HDLBP-245ENST00000494862 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
HDLBP-245ENST00000494862 PPP4R2Q9NY27 417 aa14.99□□□□□ -0.01
HDLBP-245ENST00000494862 RTL1A6NKG5 1358 aa14.98□□□□□ -0.01
HDLBP-245ENST00000494862 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
HDLBP-245ENST00000494862 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-245ENST00000494862 PHACTR3Q96KR7 559 aa14.98□□□□□ -0.01
HDLBP-245ENST00000494862 HOXC9P31274 260 aa14.97□□□□□ -0.01
HDLBP-245ENST00000494862 SULT6B1Q6IMI4 303 aa14.97□□□□□ -0.01
HDLBP-245ENST00000494862 NFAT5O94916 1531 aa14.97□□□□□ -0.01
HDLBP-245ENST00000494862 USP19O94966 1318 aa14.96□□□□□ -0.01
HDLBP-245ENST00000494862 XPCQ01831 940 aaPredicted RBP14.96□□□□□ -0.01
HDLBP-245ENST00000494862 TRPM3Q9HCF6 1732 aaPredicted RBP14.96□□□□□ -0.01
HDLBP-245ENST00000494862 SLIT3O75094 1523 aa14.96□□□□□ -0.02
HDLBP-245ENST00000494862 NPHP3Q7Z494 1330 aa14.95□□□□□ -0.02
HDLBP-245ENST00000494862 RGPD1P0DJD0 1748 aa14.95□□□□□ -0.02
HDLBP-245ENST00000494862 LMOD3Q0VAK6 560 aa14.95□□□□□ -0.02
HDLBP-245ENST00000494862 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
HDLBP-245ENST00000494862 IP6K1Q92551 441 aa14.95□□□□□ -0.02
HDLBP-245ENST00000494862 IGSF1Q8N6C5 1336 aa14.94□□□□□ -0.02
HDLBP-245ENST00000494862 CALD1Q05682 793 aaKnown RBP14.94□□□□□ -0.02
HDLBP-245ENST00000494862 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.94□□□□□ -0.02
HDLBP-245ENST00000494862 XIRP1Q702N8 1843 aaKnown RBP14.94□□□□□ -0.02
HDLBP-245ENST00000494862 GCP02774 474 aa14.93□□□□□ -0.02
HDLBP-245ENST00000494862 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
HDLBP-245ENST00000494862 EYA1Q99502 592 aa14.93□□□□□ -0.02
HDLBP-245ENST00000494862 KDRP35968 1356 aa14.93□□□□□ -0.02
HDLBP-245ENST00000494862 CT47B1P0C2W7 299 aaPredicted RBP14.92□□□□□ -0.02
HDLBP-245ENST00000494862 LMOD2Q6P5Q4 547 aa14.92□□□□□ -0.02
HDLBP-245ENST00000494862 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
HDLBP-245ENST00000494862 ARHGEF25Q86VW2 580 aa14.91□□□□□ -0.02
HDLBP-245ENST00000494862 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
HDLBP-245ENST00000494862 PLIN1O60240 522 aa14.9□□□□□ -0.02
HDLBP-245ENST00000494862 BRINP3Q76B58 766 aa14.9□□□□□ -0.02
HDLBP-245ENST00000494862 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
HDLBP-245ENST00000494862 PXDNQ92626 1479 aa14.89□□□□□ -0.03
HDLBP-245ENST00000494862 PHRF1Q9P1Y6 1649 aaKnown RBP14.89□□□□□ -0.03
HDLBP-245ENST00000494862 SLAIN2Q9P270 581 aa14.89□□□□□ -0.03
HDLBP-245ENST00000494862 TNS3Q68CZ2 1445 aa14.89□□□□□ -0.03
HDLBP-245ENST00000494862 DDX17Q92841 729 aaKnown RBP14.88□□□□□ -0.03
HDLBP-245ENST00000494862 LTV1Q96GA3 475 aaPredicted RBP14.88□□□□□ -0.03
HDLBP-245ENST00000494862 IFT57Q9NWB7 429 aa14.88□□□□□ -0.03
HDLBP-245ENST00000494862 SPATA31A3Q5VYP0 1347 aa14.88□□□□□ -0.03
HDLBP-245ENST00000494862 BCAR3O75815 825 aa14.87□□□□□ -0.03
HDLBP-245ENST00000494862 RARSP54136 660 aaKnown RBP14.87□□□□□ -0.03
HDLBP-245ENST00000494862 GNAI1P63096 354 aa14.87□□□□□ -0.03
HDLBP-245ENST00000494862 EXOSC9Q06265 439 aaKnown RBP14.87□□□□□ -0.03
HDLBP-245ENST00000494862 GAS2L2Q8NHY3 880 aa14.87□□□□□ -0.03
HDLBP-245ENST00000494862 EXOC6Q8TAG9 804 aa14.87□□□□□ -0.03
HDLBP-245ENST00000494862 TSR2Q969E8 191 aaKnown RBP14.87□□□□□ -0.03
HDLBP-245ENST00000494862 LTN1O94822 1766 aa14.86□□□□□ -0.03
HDLBP-245ENST00000494862 ZBTB7CA1YPR0 619 aa14.86□□□□□ -0.03
HDLBP-245ENST00000494862 ZNF853P0CG23 659 aa14.86□□□□□ -0.03
HDLBP-245ENST00000494862 MED1Q15648 1581 aaPredicted RBP14.85□□□□□ -0.03
HDLBP-245ENST00000494862 B4GALNT3Q6L9W6 998 aa14.85□□□□□ -0.03
HDLBP-245ENST00000494862 CRBNQ96SW2 442 aa14.85□□□□□ -0.03
HDLBP-245ENST00000494862 THUMPD2Q9BTF0 503 aaKnown RBP14.85□□□□□ -0.03
HDLBP-245ENST00000494862 SOS2Q07890 1332 aaPredicted RBP14.85□□□□□ -0.03
HDLBP-245ENST00000494862 HTATSF1O43719 755 aaKnown RBP14.84□□□□□ -0.03
HDLBP-245ENST00000494862 MTHFSDQ2M296 383 aaKnown RBP14.84□□□□□ -0.03
HDLBP-245ENST00000494862 CFAP44Q96MT7 982 aa14.84□□□□□ -0.03
HDLBP-245ENST00000494862 FAM83GA6ND36 823 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms