RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 CFAP70Q5T0N1 1121 aa10.26□□□□□ -0.77
FN1-225ENST00000494446 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
FN1-225ENST00000494446 MAP3K5Q99683 1374 aa10.26□□□□□ -0.77
FN1-225ENST00000494446 TOPAZ1Q8N9V7 1692 aa10.25□□□□□ -0.77
FN1-225ENST00000494446 TULP4Q9NRJ4 1543 aa10.25□□□□□ -0.77
FN1-225ENST00000494446 DDB1Q16531 1140 aa10.25□□□□□ -0.77
FN1-225ENST00000494446 C14orf93Q9H972 538 aaKnown RBP10.25□□□□□ -0.77
FN1-225ENST00000494446 EIF3AQ14152 1382 aaKnown RBP10.25□□□□□ -0.77
FN1-225ENST00000494446 SPATA31E1Q6ZUB1 1445 aa10.24□□□□□ -0.77
FN1-225ENST00000494446 ZBTB7CA1YPR0 619 aa10.23□□□□□ -0.77
FN1-225ENST00000494446 CAPN15O75808 1086 aa10.23□□□□□ -0.77
FN1-225ENST00000494446 CRB1P82279 1406 aa10.23□□□□□ -0.77
FN1-225ENST00000494446 RGPD5Q99666 1765 aa10.22□□□□□ -0.77
FN1-225ENST00000494446 WASLO00401 505 aaPredicted RBP10.22□□□□□ -0.77
FN1-225ENST00000494446 MARCH10Q8NA82 808 aaPredicted RBP10.22□□□□□ -0.77
FN1-225ENST00000494446 ATP10DQ9P241 1426 aa10.22□□□□□ -0.77
FN1-225ENST00000494446 COL5A2P05997 1499 aaPredicted RBP10.22□□□□□ -0.77
FN1-225ENST00000494446 ZNF526Q8TF50 670 aaPredicted RBP10.21□□□□□ -0.77
FN1-225ENST00000494446 GPBP1L1Q9HC44 474 aaPredicted RBP10.21□□□□□ -0.77
FN1-225ENST00000494446 TRAK1Q9UPV9 953 aa10.21□□□□□ -0.77
FN1-225ENST00000494446 CPDO75976 1380 aa10.21□□□□□ -0.78
FN1-225ENST00000494446 COL24A1Q17RW2 1714 aa10.2□□□□□ -0.78
FN1-225ENST00000494446 QSER1Q2KHR3 1735 aa10.2□□□□□ -0.78
FN1-225ENST00000494446 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
FN1-225ENST00000494446 NLGN2Q8NFZ4 835 aa10.2□□□□□ -0.78
FN1-225ENST00000494446 BTAF1O14981 1849 aa10.19□□□□□ -0.78
FN1-225ENST00000494446 TUBGCP6Q96RT7 1819 aa10.19□□□□□ -0.78
FN1-225ENST00000494446 PAPPAQ13219 1627 aa10.19□□□□□ -0.78
FN1-225ENST00000494446 GRIN3BO60391 1043 aa10.19□□□□□ -0.78
FN1-225ENST00000494446 POLD1P28340 1107 aa10.19□□□□□ -0.78
FN1-225ENST00000494446 TOM1L2Q6ZVM7 507 aa10.19□□□□□ -0.78
FN1-225ENST00000494446 PPARGC1BQ86YN6 1023 aaKnown RBP10.19□□□□□ -0.78
FN1-225ENST00000494446 NUDT16Q96DE0 195 aaKnown RBP10.19□□□□□ -0.78
FN1-225ENST00000494446 NHSQ6T4R5 1651 aa10.18□□□□□ -0.78
FN1-225ENST00000494446 YBX3P16989 372 aaKnown RBP eCLIP10.18□□□□□ -0.781e-57■□□□□ 10.3
FN1-225ENST00000494446 AATKQ6ZMQ8 1374 aa10.17□□□□□ -0.78
FN1-225ENST00000494446 ACEP12821 1306 aa10.17□□□□□ -0.78
FN1-225ENST00000494446 GCP02774 474 aa10.17□□□□□ -0.78
FN1-225ENST00000494446 BCL9O00512 1426 aa10.16□□□□□ -0.78
FN1-225ENST00000494446 COL18A1P39060 1754 aa10.16□□□□□ -0.78
FN1-225ENST00000494446 USP19O94966 1318 aa10.16□□□□□ -0.78
FN1-225ENST00000494446 ZNF827Q17R98 1081 aa10.16□□□□□ -0.78
FN1-225ENST00000494446 NLRP13Q86W25 1043 aa10.16□□□□□ -0.78
FN1-225ENST00000494446 SLC16A10Q8TF71 515 aa10.15□□□□□ -0.78
FN1-225ENST00000494446 ACSBG1Q96GR2 724 aa10.15□□□□□ -0.78
FN1-225ENST00000494446 ARHGEF28Q8N1W1 1705 aaKnown RBP10.15□□□□□ -0.78
FN1-225ENST00000494446 ADGRB1O14514 1584 aa10.14□□□□□ -0.79
FN1-225ENST00000494446 EXOC5O00471 708 aa10.14□□□□□ -0.79
FN1-225ENST00000494446 APLP1P51693 650 aa10.14□□□□□ -0.79
FN1-225ENST00000494446 COL13A1Q5TAT6 717 aaPredicted RBP10.14□□□□□ -0.79
FN1-225ENST00000494446 CDCA7Q9BWT1 371 aaPredicted RBP10.14□□□□□ -0.79
FN1-225ENST00000494446 POLR3AO14802 1390 aaPredicted RBP10.14□□□□□ -0.79
FN1-225ENST00000494446 CDK19Q9BWU1 502 aa10.13□□□□□ -0.79
FN1-225ENST00000494446 WDR90Q96KV7 1748 aa10.13□□□□□ -0.79
FN1-225ENST00000494446 WDR17Q8IZU2 1322 aa10.12□□□□□ -0.79
FN1-225ENST00000494446 TNS4Q8IZW8 715 aa10.12□□□□□ -0.79
FN1-225ENST00000494446 DNAJC5GQ8N7S2 189 aa10.12□□□□□ -0.79
FN1-225ENST00000494446 LRRC4BQ9NT99 713 aa10.12□□□□□ -0.79
FN1-225ENST00000494446 CSB-PGBD3P0DP91 1061 aa10.11□□□□□ -0.79
FN1-225ENST00000494446 PRELPP51888 382 aa10.11□□□□□ -0.79
FN1-225ENST00000494446 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
FN1-225ENST00000494446 ADCY9O60503 1353 aa10.11□□□□□ -0.79
FN1-225ENST00000494446 PNPLA7Q6ZV29 1317 aa10.1□□□□□ -0.79
FN1-225ENST00000494446 USP6P35125 1406 aa10.1□□□□□ -0.79
FN1-225ENST00000494446 NLRP6P59044 892 aa10.1□□□□□ -0.79
FN1-225ENST00000494446 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
FN1-225ENST00000494446 TFCP2L1Q9NZI6 479 aa10.1□□□□□ -0.79
FN1-225ENST00000494446 AXIN2Q9Y2T1 843 aa10.1□□□□□ -0.79
FN1-225ENST00000494446 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
FN1-225ENST00000494446 BRD4O60885 1362 aaPredicted RBP10.1□□□□□ -0.79
FN1-225ENST00000494446 PLEKHG3A1L390 1219 aa10.09□□□□□ -0.79
FN1-225ENST00000494446 KIF3CO14782 793 aa10.09□□□□□ -0.79
FN1-225ENST00000494446 CARD10Q9BWT7 1032 aa10.09□□□□□ -0.79
FN1-225ENST00000494446 TNS2Q63HR2 1409 aa10.08□□□□□ -0.8
FN1-225ENST00000494446 SLIT3O75094 1523 aa10.08□□□□□ -0.8
FN1-225ENST00000494446 KDM2AQ9Y2K7 1162 aa10.08□□□□□ -0.8
FN1-225ENST00000494446 PIK3C2AO00443 1686 aa10.07□□□□□ -0.8
FN1-225ENST00000494446 KCNQ4P56696 695 aa10.07□□□□□ -0.8
FN1-225ENST00000494446 TRPM1Q7Z4N2 1603 aa10.07□□□□□ -0.8
FN1-225ENST00000494446 ABCC6O95255 1503 aa10.07□□□□□ -0.8
FN1-225ENST00000494446 SOX12O15370 315 aa10.06□□□□□ -0.8
FN1-225ENST00000494446 SLC27A3Q5K4L6 730 aa10.06□□□□□ -0.8
FN1-225ENST00000494446 MSL1Q68DK7 614 aa10.06□□□□□ -0.8
FN1-225ENST00000494446 LY75O60449 1722 aa10.06□□□□□ -0.8
FN1-225ENST00000494446 CPSF1Q10570 1443 aaKnown RBP10.06□□□□□ -0.8
FN1-225ENST00000494446 PPIP5K1Q6PFW1 1433 aa10.06□□□□□ -0.8
FN1-225ENST00000494446 PCNTO95613 3336 aa10.05□□□□□ -0.8
FN1-225ENST00000494446 CCDC7Q96M83 1385 aa10.05□□□□□ -0.8
FN1-225ENST00000494446 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
FN1-225ENST00000494446 QRICH2Q9H0J4 1663 aa10.04□□□□□ -0.8
FN1-225ENST00000494446 TOMM70O94826 608 aa10.04□□□□□ -0.8
FN1-225ENST00000494446 SLC34A2O95436 690 aa10.04□□□□□ -0.8
FN1-225ENST00000494446 HTRA3P83110 453 aa10.04□□□□□ -0.8
FN1-225ENST00000494446 KLRG1Q96E93 195 aa10.04□□□□□ -0.8
FN1-225ENST00000494446 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
FN1-225ENST00000494446 SRPK2P78362 688 aaKnown RBP10.03□□□□□ -0.8
FN1-225ENST00000494446 ARHGEF25Q86VW2 580 aa10.03□□□□□ -0.8
FN1-225ENST00000494446 COL23A1Q86Y22 540 aaPredicted RBP10.03□□□□□ -0.8
FN1-225ENST00000494446 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
FN1-225ENST00000494446 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms