RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SSH1Q8WYL5 1049 aa24.13■■□□□ 1.45
SNAPC3-206ENST00000490969 PPP1R9BQ96SB3 815 aa24.12■■□□□ 1.45
SNAPC3-206ENST00000490969 CDK19Q9BWU1 502 aa24.12■■□□□ 1.45
SNAPC3-206ENST00000490969 ABCC11Q96J66 1382 aa24.12■■□□□ 1.45
SNAPC3-206ENST00000490969 U2AF1L5P0DN76 240 aaPredicted RBP24.12■■□□□ 1.45
SNAPC3-206ENST00000490969 U2AF1Q01081 240 aaKnown RBP eCLIP24.12■■□□□ 1.45
SNAPC3-206ENST00000490969 NUCB1Q02818 461 aa24.12■■□□□ 1.45
SNAPC3-206ENST00000490969 KIAA1211Q6ZU35 1233 aa24.12■■□□□ 1.45
SNAPC3-206ENST00000490969 PDCL3Q9H2J4 239 aa24.12■■□□□ 1.45
SNAPC3-206ENST00000490969 USP32Q8NFA0 1604 aa24.1■■□□□ 1.45
SNAPC3-206ENST00000490969 HDGFP51858 240 aaKnown RBP24.1■■□□□ 1.45
SNAPC3-206ENST00000490969 KIF2CQ99661 725 aa24.1■■□□□ 1.45
SNAPC3-206ENST00000490969 ZBTB40Q9NUA8 1239 aa24.1■■□□□ 1.45
SNAPC3-206ENST00000490969 NASPP49321 788 aaPredicted RBP24.09■■□□□ 1.45
SNAPC3-206ENST00000490969 TMEM57Q8N5G2 664 aa24.09■■□□□ 1.45
SNAPC3-206ENST00000490969 LNPKQ9C0E8 428 aa24.09■■□□□ 1.45
SNAPC3-206ENST00000490969 ZSCAN30Q86W11 494 aa24.09■■□□□ 1.45
SNAPC3-206ENST00000490969 NOB1Q9ULX3 412 aaKnown RBP24.09■■□□□ 1.45
SNAPC3-206ENST00000490969 FOXD4L1Q9NU39 408 aa24.08■■□□□ 1.45
SNAPC3-206ENST00000490969 CD2BP2O95400 341 aaKnown RBP24.08■■□□□ 1.44
SNAPC3-206ENST00000490969 DLC1Q96QB1 1528 aa24.07■■□□□ 1.44
SNAPC3-206ENST00000490969 PLEKHG1Q9ULL1 1385 aa24.06■■□□□ 1.44
SNAPC3-206ENST00000490969 K7ELQ4 463 aaPredicted RBP24.06■■□□□ 1.44
SNAPC3-206ENST00000490969 BMP2KLQ5H9B9 411 aa24.06■■□□□ 1.44
SNAPC3-206ENST00000490969 CHD1LQ86WJ1 897 aa24.06■■□□□ 1.44
SNAPC3-206ENST00000490969 ROBO2Q9HCK4 1378 aa24.06■■□□□ 1.44
SNAPC3-206ENST00000490969 PUS7Q96PZ0 661 aaKnown RBP24.06■■□□□ 1.44
SNAPC3-206ENST00000490969 ARHGAP23Q9P227 1491 aa24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 A0A1W2PP64 1363 aa24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 IBTKQ9P2D0 1353 aaPredicted RBP24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 NCKAP5LQ9HCH0 1330 aa24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 ANP32BQ92688 251 aaKnown RBP24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 ADAMTSL3P82987 1691 aa24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 GOLGA6L22H0YM25 854 aa24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 OFD1O75665 1012 aa24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 SSFA2P28290 1259 aa24.05■■□□□ 1.44
SNAPC3-206ENST00000490969 SLIT1O75093 1534 aa24.04■■□□□ 1.44
SNAPC3-206ENST00000490969 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
SNAPC3-206ENST00000490969 PTPRUQ92729 1446 aa24.04■■□□□ 1.44
SNAPC3-206ENST00000490969 ANKRD36BQ8N2N9 1353 aa24.04■■□□□ 1.44
SNAPC3-206ENST00000490969 CD163L1Q9NR16 1453 aa24.04■■□□□ 1.44
SNAPC3-206ENST00000490969 EID1Q9Y6B2 187 aa24.04■■□□□ 1.44
SNAPC3-206ENST00000490969 KLHL40Q2TBA0 621 aa24.03■■□□□ 1.44
SNAPC3-206ENST00000490969 THEMISQ8N1K5 641 aaPredicted RBP24.03■■□□□ 1.44
SNAPC3-206ENST00000490969 CLEC17AQ6ZS10 378 aa24.03■■□□□ 1.44
SNAPC3-206ENST00000490969 MED14O60244 1454 aa24.02■■□□□ 1.44
SNAPC3-206ENST00000490969 MSNP26038 577 aaKnown RBP24.01■■□□□ 1.43
SNAPC3-206ENST00000490969 DDX49Q9Y6V7 483 aaKnown RBP24.01■■□□□ 1.43
SNAPC3-206ENST00000490969 KIF16BQ96L93 1317 aa24.01■■□□□ 1.43
SNAPC3-206ENST00000490969 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.01■■□□□ 1.43
SNAPC3-206ENST00000490969 TRIM35Q9UPQ4 493 aa24.01■■□□□ 1.43
SNAPC3-206ENST00000490969 IPO8O15397 1037 aaKnown RBP24■■□□□ 1.43
SNAPC3-206ENST00000490969 TMPOP42166 694 aaKnown RBP24■■□□□ 1.43
SNAPC3-206ENST00000490969 GAS2L2Q8NHY3 880 aa24■■□□□ 1.43
SNAPC3-206ENST00000490969 RBM42Q9BTD8 480 aaKnown RBP24■■□□□ 1.43
SNAPC3-206ENST00000490969 CEP170BQ9Y4F5 1589 aaPredicted RBP23.99■■□□□ 1.43
SNAPC3-206ENST00000490969 TECPR2O15040 1411 aa23.99■■□□□ 1.43
SNAPC3-206ENST00000490969 BAG4O95429 457 aaKnown RBP23.99■■□□□ 1.43
SNAPC3-206ENST00000490969 PLEKHF1Q96S99 279 aa23.99■■□□□ 1.43
SNAPC3-206ENST00000490969 ATAD2Q6PL18 1390 aa23.98■■□□□ 1.43
SNAPC3-206ENST00000490969 TERF1P54274 439 aa23.98■■□□□ 1.43
SNAPC3-206ENST00000490969 NSD2O96028 1365 aa23.98■■□□□ 1.43
SNAPC3-206ENST00000490969 WASLO00401 505 aaPredicted RBP23.98■■□□□ 1.43
SNAPC3-206ENST00000490969 TBC1D9Q6ZT07 1266 aa23.98■■□□□ 1.43
SNAPC3-206ENST00000490969 IL16Q14005 1332 aa23.97■■□□□ 1.43
SNAPC3-206ENST00000490969 KNDC1Q76NI1 1749 aa23.96■■□□□ 1.43
SNAPC3-206ENST00000490969 GGNBP2Q9H3C7 697 aa23.96■■□□□ 1.43
SNAPC3-206ENST00000490969 CPS1P31327 1500 aa23.96■■□□□ 1.43
SNAPC3-206ENST00000490969 RIPK4P57078 832 aa23.95■■□□□ 1.43
SNAPC3-206ENST00000490969 ANKRD45Q5TZF3 282 aa23.95■■□□□ 1.43
SNAPC3-206ENST00000490969 NUTM2FA1L443 756 aa23.95■■□□□ 1.42
SNAPC3-206ENST00000490969 ZNF445P59923 1031 aa23.95■■□□□ 1.42
SNAPC3-206ENST00000490969 AMOTL2Q9Y2J4 779 aa23.95■■□□□ 1.42
SNAPC3-206ENST00000490969 FAM135BQ49AJ0 1406 aa23.95■■□□□ 1.42
SNAPC3-206ENST00000490969 U2SURPO15042 1029 aaKnown RBP23.94■■□□□ 1.42
SNAPC3-206ENST00000490969 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.94■■□□□ 1.42
SNAPC3-206ENST00000490969 HS1BP3Q53T59 392 aa23.93■■□□□ 1.42
SNAPC3-206ENST00000490969 PRR36Q9H6K5 1346 aa23.93■■□□□ 1.42
SNAPC3-206ENST00000490969 GCC1Q96CN9 775 aa23.92■■□□□ 1.42
SNAPC3-206ENST00000490969 FYB1O15117 783 aa23.92■■□□□ 1.42
SNAPC3-206ENST00000490969 TBX22Q9Y458 520 aa23.92■■□□□ 1.42
SNAPC3-206ENST00000490969 PPIP5K1Q6PFW1 1433 aa23.92■■□□□ 1.42
SNAPC3-206ENST00000490969 SIRT1Q96EB6 747 aa23.91■■□□□ 1.42
SNAPC3-206ENST00000490969 AK9Q5TCS8 1911 aa23.91■■□□□ 1.42
SNAPC3-206ENST00000490969 RBM10P98175 930 aaKnown RBP23.91■■□□□ 1.42
SNAPC3-206ENST00000490969 ALDH1L2Q3SY69 923 aa23.91■■□□□ 1.42
SNAPC3-206ENST00000490969 NUDT16Q96DE0 195 aaKnown RBP23.9■■□□□ 1.42
SNAPC3-206ENST00000490969 TERF2IPQ9NYB0 399 aa23.9■■□□□ 1.42
SNAPC3-206ENST00000490969 CALD1Q05682 793 aaKnown RBP23.9■■□□□ 1.42
SNAPC3-206ENST00000490969 FBLN1P23142 703 aa23.89■■□□□ 1.42
SNAPC3-206ENST00000490969 MCTP1Q6DN14 999 aa23.89■■□□□ 1.42
SNAPC3-206ENST00000490969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.89■■□□□ 1.42
SNAPC3-206ENST00000490969 NOL7Q9UMY1 257 aaKnown RBP23.89■■□□□ 1.42
SNAPC3-206ENST00000490969 ZSCAN23Q3MJ62 389 aa23.89■■□□□ 1.41
SNAPC3-206ENST00000490969 R3HCC1Q9Y3T6 440 aaKnown RBP23.89■■□□□ 1.41
SNAPC3-206ENST00000490969 CAVIN1Q6NZI2 390 aaKnown RBP23.88■■□□□ 1.41
SNAPC3-206ENST00000490969 SETD1BQ9UPS6 1966 aaKnown RBP23.88■■□□□ 1.41
SNAPC3-206ENST00000490969 ZNF500O60304 480 aaPredicted RBP23.87■■□□□ 1.41
SNAPC3-206ENST00000490969 NCLP19338 710 aaKnown RBP23.87■■□□□ 1.41
SNAPC3-206ENST00000490969 COL3A1P02461 1466 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms