RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 BARGINQ6ZT62 677 aa16.89■□□□□ 0.29
SRSF4-204ENST00000489898 CASZ1Q86V15 1759 aa16.89■□□□□ 0.29
SRSF4-204ENST00000489898 ARHGEF25Q86VW2 580 aa16.88■□□□□ 0.29
SRSF4-204ENST00000489898 CCDC125Q86Z20 511 aa16.88■□□□□ 0.29
SRSF4-204ENST00000489898 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
SRSF4-204ENST00000489898 STRN4Q9NRL3 753 aa16.87■□□□□ 0.29
SRSF4-204ENST00000489898 PAPPAQ13219 1627 aa16.87■□□□□ 0.29
SRSF4-204ENST00000489898 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
SRSF4-204ENST00000489898 NLRP6P59044 892 aa16.86■□□□□ 0.29
SRSF4-204ENST00000489898 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
SRSF4-204ENST00000489898 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
SRSF4-204ENST00000489898 BTAF1O14981 1849 aa16.86■□□□□ 0.29
SRSF4-204ENST00000489898 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
SRSF4-204ENST00000489898 DOT1LQ8TEK3 1739 aa16.85■□□□□ 0.29
SRSF4-204ENST00000489898 NME9Q86XW9 330 aa16.85■□□□□ 0.29
SRSF4-204ENST00000489898 ZNF692Q9BU19 519 aaPredicted RBP16.84■□□□□ 0.29
SRSF4-204ENST00000489898 WDR17Q8IZU2 1322 aa16.84■□□□□ 0.29
SRSF4-204ENST00000489898 BCL9O00512 1426 aa16.84■□□□□ 0.29
SRSF4-204ENST00000489898 TNS2Q63HR2 1409 aa16.84■□□□□ 0.29
SRSF4-204ENST00000489898 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
SRSF4-204ENST00000489898 TUBGCP6Q96RT7 1819 aa16.83■□□□□ 0.28
SRSF4-204ENST00000489898 CLSPNQ9HAW4 1339 aa16.82■□□□□ 0.28
SRSF4-204ENST00000489898 TCP11L2Q8N4U5 519 aa16.82■□□□□ 0.28
SRSF4-204ENST00000489898 OVOS2A0A0G2JMS6 1433 aa16.81■□□□□ 0.28
SRSF4-204ENST00000489898 PKD1L3Q7Z443 1732 aa16.81■□□□□ 0.28
SRSF4-204ENST00000489898 TOGARAM1Q9Y4F4 1720 aa16.81■□□□□ 0.28
SRSF4-204ENST00000489898 ERBB3P21860 1342 aa16.8■□□□□ 0.28
SRSF4-204ENST00000489898 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
SRSF4-204ENST00000489898 THRAP3Q9Y2W1 955 aaKnown RBP16.8■□□□□ 0.28
SRSF4-204ENST00000489898 MAP2P11137 1827 aaKnown RBP16.8■□□□□ 0.28
SRSF4-204ENST00000489898 LY75O60449 1722 aa16.79■□□□□ 0.28
SRSF4-204ENST00000489898 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
SRSF4-204ENST00000489898 A0A0G2JS52 829 aa16.77■□□□□ 0.28
SRSF4-204ENST00000489898 MYT1Q01538 1121 aa16.77■□□□□ 0.28
SRSF4-204ENST00000489898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
SRSF4-204ENST00000489898 KCNH5Q8NCM2 988 aa16.77■□□□□ 0.28
SRSF4-204ENST00000489898 COL24A1Q17RW2 1714 aa16.76■□□□□ 0.27
SRSF4-204ENST00000489898 CAMKK2Q96RR4 588 aa16.76■□□□□ 0.27
SRSF4-204ENST00000489898 EN1Q05925 392 aaPredicted RBP16.75■□□□□ 0.27
SRSF4-204ENST00000489898 PTF1AQ7RTS3 328 aa16.75■□□□□ 0.27
SRSF4-204ENST00000489898 PARD3Q8TEW0 1356 aa16.75■□□□□ 0.27
SRSF4-204ENST00000489898 MEGF6O75095 1541 aa16.75■□□□□ 0.27
SRSF4-204ENST00000489898 NCAPD2Q15021 1401 aa16.74■□□□□ 0.27
SRSF4-204ENST00000489898 SOX12O15370 315 aa16.74■□□□□ 0.27
SRSF4-204ENST00000489898 CCDC7Q96M83 1385 aa16.74■□□□□ 0.27
SRSF4-204ENST00000489898 TRIM37O94972 964 aa16.73■□□□□ 0.27
SRSF4-204ENST00000489898 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
SRSF4-204ENST00000489898 CARD10Q9BWT7 1032 aa16.73■□□□□ 0.27
SRSF4-204ENST00000489898 EVA1CP58658 441 aa16.72■□□□□ 0.27
SRSF4-204ENST00000489898 EZH2Q15910 746 aaKnown RBP16.72■□□□□ 0.27
SRSF4-204ENST00000489898 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
SRSF4-204ENST00000489898 TMC1Q8TDI8 760 aa16.72■□□□□ 0.27
SRSF4-204ENST00000489898 ITGB4P16144 1822 aa16.72■□□□□ 0.27
SRSF4-204ENST00000489898 ZBTB7CA1YPR0 619 aa16.71■□□□□ 0.27
SRSF4-204ENST00000489898 BAG6P46379 1132 aa16.71■□□□□ 0.27
SRSF4-204ENST00000489898 HDGFL2Q7Z4V5 671 aaPredicted RBP16.71■□□□□ 0.27
SRSF4-204ENST00000489898 TIMELESSQ9UNS1 1208 aa16.71■□□□□ 0.27
SRSF4-204ENST00000489898 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
SRSF4-204ENST00000489898 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
SRSF4-204ENST00000489898 FBLN1P23142 703 aa16.7■□□□□ 0.26
SRSF4-204ENST00000489898 TOM1L2Q6ZVM7 507 aa16.7■□□□□ 0.26
SRSF4-204ENST00000489898 TERF2IPQ9NYB0 399 aa16.7■□□□□ 0.26
SRSF4-204ENST00000489898 TAF1LQ8IZX4 1826 aa16.7■□□□□ 0.26
SRSF4-204ENST00000489898 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
SRSF4-204ENST00000489898 CARD14Q9BXL6 1004 aa16.69■□□□□ 0.26
SRSF4-204ENST00000489898 UTRNP46939 3433 aa16.68■□□□□ 0.26
SRSF4-204ENST00000489898 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
SRSF4-204ENST00000489898 FYB1O15117 783 aa16.67■□□□□ 0.26
SRSF4-204ENST00000489898 SF3B2Q13435 895 aaKnown RBP16.66■□□□□ 0.26
SRSF4-204ENST00000489898 DDB1Q16531 1140 aa16.66■□□□□ 0.26
SRSF4-204ENST00000489898 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
SRSF4-204ENST00000489898 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
SRSF4-204ENST00000489898 NSD2O96028 1365 aa16.65■□□□□ 0.26
SRSF4-204ENST00000489898 TMF1P82094 1093 aa16.65■□□□□ 0.26
SRSF4-204ENST00000489898 PDE3BQ13370 1112 aa16.65■□□□□ 0.26
SRSF4-204ENST00000489898 ANKRD24Q8TF21 1146 aa16.65■□□□□ 0.26
SRSF4-204ENST00000489898 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
SRSF4-204ENST00000489898 HOXC9P31274 260 aa16.64■□□□□ 0.25
SRSF4-204ENST00000489898 IP6K1Q92551 441 aa16.64■□□□□ 0.25
SRSF4-204ENST00000489898 ANO8Q9HCE9 1232 aaPredicted RBP16.64■□□□□ 0.25
SRSF4-204ENST00000489898 C5P01031 1676 aa16.64■□□□□ 0.25
SRSF4-204ENST00000489898 PROM2Q8N271 834 aa16.63■□□□□ 0.25
SRSF4-204ENST00000489898 CDCA7Q9BWT1 371 aaPredicted RBP16.63■□□□□ 0.25
SRSF4-204ENST00000489898 APBA3O96018 575 aa16.62■□□□□ 0.25
SRSF4-204ENST00000489898 GGNBP2Q9H3C7 697 aa16.62■□□□□ 0.25
SRSF4-204ENST00000489898 GOLGB1Q14789 3259 aaKnown RBP16.62■□□□□ 0.25
SRSF4-204ENST00000489898 R3HDM1Q15032 1099 aaKnown RBP16.61■□□□□ 0.25
SRSF4-204ENST00000489898 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
SRSF4-204ENST00000489898 KIF24Q5T7B8 1368 aa16.61■□□□□ 0.25
SRSF4-204ENST00000489898 RRS1Q15050 365 aaKnown RBP16.6■□□□□ 0.25
SRSF4-204ENST00000489898 INSRP06213 1382 aa16.6■□□□□ 0.25
SRSF4-204ENST00000489898 PLSCR1O15162 318 aa16.59■□□□□ 0.25
SRSF4-204ENST00000489898 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
SRSF4-204ENST00000489898 BCL11BQ9C0K0 894 aaPredicted RBP16.59■□□□□ 0.25
SRSF4-204ENST00000489898 FLT4P35916 1363 aa16.59■□□□□ 0.25
SRSF4-204ENST00000489898 C11orf95C9JLR9 678 aaPredicted RBP16.58■□□□□ 0.24
SRSF4-204ENST00000489898 KCNQ2O43526 872 aa16.58■□□□□ 0.24
SRSF4-204ENST00000489898 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
SRSF4-204ENST00000489898 COG3Q96JB2 828 aa16.58■□□□□ 0.24
SRSF4-204ENST00000489898 IL2RBP14784 551 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms