RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PRIMPOLQ96LW4 560 aa5.92□□□□□ -1.46
SNRNP40-206ENST00000489853 ANKRD30BQ9BXX2 1392 aa5.92□□□□□ -1.46
SNRNP40-206ENST00000489853 RPRD2Q5VT52 1461 aaKnown RBP5.92□□□□□ -1.46
SNRNP40-206ENST00000489853 IGHDP01880 384 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 GTF2F1P35269 517 aaKnown RBP eCLIP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 HMGN5P82970 282 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 DNAJC2Q99543 621 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 POLR3GLQ9BT43 218 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 POLR3EQ9NVU0 708 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 BLMP54132 1417 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 CUX1P39880 1505 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 HECW1Q76N89 1606 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 GAPVD1Q14C86 1478 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 USP47Q96K76 1375 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 HSP90AB1P08238 724 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 BRD2P25440 801 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 ZNF445P59923 1031 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 FBXO31Q5XUX0 539 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 CLEC17AQ6ZS10 378 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 PROSER2Q86WR7 435 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 TNPO1Q92973 898 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 CCDC39Q9UFE4 941 aa5.91□□□□□ -1.46
SNRNP40-206ENST00000489853 TEX14Q8IWB6 1497 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 PARD3Q8TEW0 1356 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 CGNL1Q0VF96 1302 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 ZBTB7CA1YPR0 619 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 EVI5O60447 810 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 IRX3P78415 501 aaPredicted RBP5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 RAB3GAP1Q15042 981 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 ATP2B3Q16720 1220 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 NBPF1Q3BBV0 1214 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 DUSP27Q5VZP5 1158 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 HSCBQ8IWL3 235 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 SMC5Q8IY18 1101 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 SNX21Q969T3 373 aa5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 NPDC1Q9NQX5 325 aaPredicted RBP5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 ATP1B4Q9UN42 357 aaPredicted RBP5.9□□□□□ -1.46
SNRNP40-206ENST00000489853 FGD5Q6ZNL6 1462 aa5.9□□□□□ -1.47
SNRNP40-206ENST00000489853 NCOA3Q9Y6Q9 1424 aa5.9□□□□□ -1.47
SNRNP40-206ENST00000489853 GOLGA6L22H0YM25 854 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 PTGER2P43116 358 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 KLHL40Q2TBA0 621 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 SH3D19Q5HYK7 790 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 ANKRD13DQ6ZTN6 518 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 FNBP4Q8N3X1 1017 aaPredicted RBP5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 CHMP7Q8WUX9 453 aaPredicted RBP5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 FEZ1Q99689 392 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 TMUB1Q9BVT8 246 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 C22orf23Q9BZE7 217 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 BCORL1Q5H9F3 1711 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 FYCO1Q9BQS8 1478 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 CASKIN1Q8WXD9 1431 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 KDM4FA0A1W2PPD8 638 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 NUDT7P0C024 238 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 PDE3AQ14432 1141 aa5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 CGNQ9P2M7 1197 aaKnown RBP5.89□□□□□ -1.47
SNRNP40-206ENST00000489853 GABPB1Q06547 395 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 TSR1Q2NL82 804 aaKnown RBP5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 ZNF771Q7L3S4 317 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 RGS22Q8NE09 1264 aa5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 PMFBP1Q8TBY8 1022 aa5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 SECISBP2LQ93073 1101 aaKnown RBP5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 RBM33Q96EV2 1170 aaKnown RBP5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 BEGAINQ9BUH8 593 aa5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 PANK3Q9H999 370 aa5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 RRP7BPQ9NSQ0 103 aa5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 SYNJ2O15056 1496 aa5.88□□□□□ -1.47
SNRNP40-206ENST00000489853 CCDC66A2RUB6 948 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 SSTR3P32745 418 aaPredicted RBP5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 KCNJ4P48050 445 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 POTEEQ6S8J3 1075 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 TRMT2AQ8IZ69 625 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 TSPYL1Q9H0U9 437 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 ARHGAP31Q2M1Z3 1444 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 NINLQ9Y2I6 1382 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 ZNF521Q96K83 1311 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 GRIN2BQ13224 1484 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 MAGI1Q96QZ7 1491 aaPredicted RBP5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 MMP14P50281 582 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 LSM11P83369 360 aaKnown RBP eCLIP5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 SLFN5Q08AF3 891 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 KIAA2012Q0VF49 1180 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 PDCL2Q8N4E4 241 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 GPCPD1Q9NPB8 672 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 SNRKQ9NRH2 765 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 OGFRQ9NZT2 677 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 KIF3AQ9Y496 699 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 DDX49Q9Y6V7 483 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 PCF11O94913 1555 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 IGF1RP08069 1367 aa5.87□□□□□ -1.47
SNRNP40-206ENST00000489853 AEBP1Q8IUX7 1158 aa5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 TIGD1Q96MW7 591 aa5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 RBSNQ9H1K0 784 aa5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 LHX6Q9UPM6 363 aa5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 CCDC9Q9Y3X0 531 aaKnown RBP5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 CTTNBP2Q8WZ74 1663 aa5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 MAP3K7O43318 606 aa5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 FAM193AP78312 1265 aa5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 SKIV2LQ15477 1246 aaKnown RBP5.86□□□□□ -1.47
SNRNP40-206ENST00000489853 COG6Q9Y2V7 657 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms