RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 VASH1Q7L8A9 365 aaPredicted RBP6.64□□□□□ -1.35
AC055855.1-201ENST00000489563 NFATC2IPQ8NCF5 419 aa6.64□□□□□ -1.35
AC055855.1-201ENST00000489563 MAFBQ9Y5Q3 323 aaPredicted RBP6.64□□□□□ -1.35
AC055855.1-201ENST00000489563 PPP1R15AO75807 674 aaPredicted RBP6.63□□□□□ -1.35
AC055855.1-201ENST00000489563 RAB15P59190 212 aa6.63□□□□□ -1.35
AC055855.1-201ENST00000489563 PHTF2Q8N3S3 785 aa6.63□□□□□ -1.35
AC055855.1-201ENST00000489563 KCTD15Q96SI1 283 aaPredicted RBP6.63□□□□□ -1.35
AC055855.1-201ENST00000489563 PRKD2Q9BZL6 878 aa6.63□□□□□ -1.35
AC055855.1-201ENST00000489563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.62□□□□□ -1.35
AC055855.1-201ENST00000489563 USP17L5A8MUK1 530 aa6.62□□□□□ -1.35
AC055855.1-201ENST00000489563 CDCA8Q53HL2 280 aa6.62□□□□□ -1.35
AC055855.1-201ENST00000489563 ZNF697Q5TEC3 545 aa6.62□□□□□ -1.35
AC055855.1-201ENST00000489563 ZNF598Q86UK7 904 aaKnown RBP6.62□□□□□ -1.35
AC055855.1-201ENST00000489563 DEPDC4Q8N2C3 294 aa6.62□□□□□ -1.35
AC055855.1-201ENST00000489563 PLPP7Q8NBV4 271 aa6.62□□□□□ -1.35
AC055855.1-201ENST00000489563 PBXIP1Q96AQ6 731 aa6.62□□□□□ -1.35
AC055855.1-201ENST00000489563 USP17L3A6NCW0 530 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 USP17L4A6NCW7 530 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 WNT7AO00755 349 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 FOXC1Q12948 553 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 MAP7D1Q3KQU3 841 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 TSGA10IPQ3SY00 556 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 USP17L2Q6R6M4 530 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 USP17L1Q7RTZ2 530 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 MRGPRX2Q96LB1 330 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 VRTNQ9H8Y1 702 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 DOLKQ9UPQ8 538 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 MAP4K5Q9Y4K4 846 aa6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 V9GY48 417 aaPredicted RBP6.61□□□□□ -1.35
AC055855.1-201ENST00000489563 SIAH2O43255 324 aa6.6□□□□□ -1.35
AC055855.1-201ENST00000489563 LZTS3O60299 673 aaPredicted RBP6.6□□□□□ -1.35
AC055855.1-201ENST00000489563 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
AC055855.1-201ENST00000489563 CCDC85AQ96PX6 553 aaPredicted RBP6.6□□□□□ -1.35
AC055855.1-201ENST00000489563 CDK15Q96Q40 435 aa6.6□□□□□ -1.35
AC055855.1-201ENST00000489563 TLL2Q9Y6L7 1015 aa6.6□□□□□ -1.35
AC055855.1-201ENST00000489563 ESPNB1AK53 854 aa6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 NCOA4Q13772 614 aa6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 EML3Q32P44 896 aa6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 OXLD1Q5BKU9 147 aa6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 CCDC125Q86Z20 511 aa6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 PLEKHM2Q8IWE5 1019 aa6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 MKRN1Q9UHC7 482 aaKnown RBP6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 CHIC2Q9UKJ5 165 aa6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 PCDHB11Q9Y5F2 797 aa6.59□□□□□ -1.35
AC055855.1-201ENST00000489563 FSHRP23945 695 aa6.58□□□□□ -1.36
AC055855.1-201ENST00000489563 SRPK2P78362 688 aaKnown RBP6.58□□□□□ -1.36
AC055855.1-201ENST00000489563 INTS6LQ5JSJ4 861 aaKnown RBP6.58□□□□□ -1.36
AC055855.1-201ENST00000489563 TRAF7Q6Q0C0 670 aa6.58□□□□□ -1.36
AC055855.1-201ENST00000489563 MPNDQ8N594 471 aa6.58□□□□□ -1.36
AC055855.1-201ENST00000489563 ESF1Q9H501 851 aaKnown RBP6.58□□□□□ -1.36
AC055855.1-201ENST00000489563 ADH1CP00326 375 aa6.57□□□□□ -1.36
AC055855.1-201ENST00000489563 ALDH1A1P00352 501 aa6.57□□□□□ -1.36
AC055855.1-201ENST00000489563 GRM5P41594 1212 aa6.57□□□□□ -1.36
AC055855.1-201ENST00000489563 USP4Q13107 963 aa6.57□□□□□ -1.36
AC055855.1-201ENST00000489563 KANK4Q5T7N3 995 aaPredicted RBP6.57□□□□□ -1.36
AC055855.1-201ENST00000489563 CDCA7Q9BWT1 371 aaPredicted RBP6.57□□□□□ -1.36
AC055855.1-201ENST00000489563 NOD1Q9Y239 953 aa6.57□□□□□ -1.36
AC055855.1-201ENST00000489563 TTC24A2A3L6 582 aaPredicted RBP6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 ATP5J2-PTCD1G3V325 749 aa6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 ERVH48-1M5A8F1 160 aa6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 RASA1P20936 1047 aa6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 DHX9Q08211 1270 aaKnown RBP6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 NR5A1Q13285 461 aa6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 LARP1Q6PKG0 1096 aaKnown RBP6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 SNIP1Q8TAD8 396 aaKnown RBP6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 TRIM52Q96A61 297 aa6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 SIRT1Q96EB6 747 aa6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 PKD2L1Q9P0L9 805 aa6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 WASF2Q9Y6W5 498 aa6.56□□□□□ -1.36
AC055855.1-201ENST00000489563 ATG7O95352 703 aa6.55□□□□□ -1.36
AC055855.1-201ENST00000489563 MYCP01106 439 aaPredicted RBP6.55□□□□□ -1.36
AC055855.1-201ENST00000489563 CSB-PGBD3P0DP91 1061 aa6.55□□□□□ -1.36
AC055855.1-201ENST00000489563 PDIA4P13667 645 aaKnown RBP6.55□□□□□ -1.36
AC055855.1-201ENST00000489563 TRIM50Q86XT4 487 aa6.55□□□□□ -1.36
AC055855.1-201ENST00000489563 CCDC116Q8IYX3 515 aa6.55□□□□□ -1.36
AC055855.1-201ENST00000489563 CYP4X1Q8N118 509 aa6.55□□□□□ -1.36
AC055855.1-201ENST00000489563 TNFRSF10AO00220 468 aa6.54□□□□□ -1.36
AC055855.1-201ENST00000489563 ATP1A2P50993 1020 aa6.54□□□□□ -1.36
AC055855.1-201ENST00000489563 OGFOD1Q8N543 542 aa6.54□□□□□ -1.36
AC055855.1-201ENST00000489563 RETREG2Q8NC44 543 aa6.54□□□□□ -1.36
AC055855.1-201ENST00000489563 TMPRSS4Q9NRS4 437 aa6.54□□□□□ -1.36
AC055855.1-201ENST00000489563 GDF9O60383 454 aa6.53□□□□□ -1.36
AC055855.1-201ENST00000489563 GTF2IP78347 998 aa6.53□□□□□ -1.36
AC055855.1-201ENST00000489563 PSME1Q06323 249 aa6.53□□□□□ -1.36
AC055855.1-201ENST00000489563 PDE4CQ08493 712 aa6.53□□□□□ -1.36
AC055855.1-201ENST00000489563 NNTQ13423 1086 aa6.53□□□□□ -1.36
AC055855.1-201ENST00000489563 PPP1R26Q5T8A7 1209 aaPredicted RBP6.53□□□□□ -1.36
AC055855.1-201ENST00000489563 FAM196BA6NMK8 535 aa6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 J3QL48 77 aa6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 NR3C2P08235 984 aa6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 MYT1Q01538 1121 aa6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 CRTC2Q53ET0 693 aaPredicted RBP6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 CC2D2BQ6DHV5 1058 aa6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 ZNF594Q96JF6 807 aaPredicted RBP6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 CYLDQ9NQC7 956 aa6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 DNAAF2Q9NVR5 837 aaKnown RBP6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 PGPEP1Q9NXJ5 209 aa6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 RBM19Q9Y4C8 960 aaKnown RBP6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 EMILIN1Q9Y6C2 1016 aa6.52□□□□□ -1.37
AC055855.1-201ENST00000489563 USP17L15C9J2P7 530 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms