RNA–Protein interactions for RNA: ENST00000488065.1

PITRM1-210, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 5

Gene PITRM1, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-210ENST00000488065 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
PITRM1-210ENST00000488065 KRT28Q7Z3Y7 464 aa13.96□□□□□ -0.17
PITRM1-210ENST00000488065 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.17
PITRM1-210ENST00000488065 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.18
PITRM1-210ENST00000488065 CRYBG1Q9Y4K1 1723 aa13.95□□□□□ -0.18
PITRM1-210ENST00000488065 GABBR2O75899 941 aa13.95□□□□□ -0.18
PITRM1-210ENST00000488065 ALS2Q96Q42 1657 aa13.95□□□□□ -0.18
PITRM1-210ENST00000488065 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
PITRM1-210ENST00000488065 LRP5O75197 1615 aa13.94□□□□□ -0.18
PITRM1-210ENST00000488065 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
PITRM1-210ENST00000488065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.94□□□□□ -0.18
PITRM1-210ENST00000488065 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
PITRM1-210ENST00000488065 NSD3Q9BZ95 1437 aa13.94□□□□□ -0.18
PITRM1-210ENST00000488065 USP6P35125 1406 aa13.93□□□□□ -0.18
PITRM1-210ENST00000488065 SEPT12Q8IYM1 358 aa13.93□□□□□ -0.18
PITRM1-210ENST00000488065 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
PITRM1-210ENST00000488065 EDC4Q6P2E9 1401 aaKnown RBP13.92□□□□□ -0.18
PITRM1-210ENST00000488065 AKAP12Q02952 1782 aa13.92□□□□□ -0.18
PITRM1-210ENST00000488065 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
PITRM1-210ENST00000488065 LMOD2Q6P5Q4 547 aa13.92□□□□□ -0.18
PITRM1-210ENST00000488065 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
PITRM1-210ENST00000488065 BRD4O60885 1362 aaPredicted RBP13.92□□□□□ -0.18
PITRM1-210ENST00000488065 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
PITRM1-210ENST00000488065 TTC21BQ7Z4L5 1316 aa13.91□□□□□ -0.18
PITRM1-210ENST00000488065 TTC21AQ8NDW8 1320 aa13.91□□□□□ -0.18
PITRM1-210ENST00000488065 TNS1Q9HBL0 1735 aaKnown RBP13.91□□□□□ -0.18
PITRM1-210ENST00000488065 CNGB1Q14028 1251 aaPredicted RBP13.91□□□□□ -0.18
PITRM1-210ENST00000488065 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
PITRM1-210ENST00000488065 COL14A1Q05707 1796 aaKnown RBP13.91□□□□□ -0.18
PITRM1-210ENST00000488065 VPS72Q15906 364 aa13.9□□□□□ -0.18
PITRM1-210ENST00000488065 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
PITRM1-210ENST00000488065 SBNO1A3KN83 1393 aa13.9□□□□□ -0.18
PITRM1-210ENST00000488065 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.18
PITRM1-210ENST00000488065 MON2Q7Z3U7 1717 aa13.9□□□□□ -0.18
PITRM1-210ENST00000488065 ARHGEF10O15013 1369 aa13.89□□□□□ -0.19
PITRM1-210ENST00000488065 A0A0G2JS52 829 aa13.89□□□□□ -0.19
PITRM1-210ENST00000488065 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
PITRM1-210ENST00000488065 MYT1Q01538 1121 aa13.89□□□□□ -0.19
PITRM1-210ENST00000488065 THSD7AQ9UPZ6 1657 aa13.88□□□□□ -0.19
PITRM1-210ENST00000488065 CC2D1BQ5T0F9 858 aaKnown RBP13.88□□□□□ -0.19
PITRM1-210ENST00000488065 NME9Q86XW9 330 aa13.88□□□□□ -0.19
PITRM1-210ENST00000488065 PHRF1Q9P1Y6 1649 aaKnown RBP13.88□□□□□ -0.19
PITRM1-210ENST00000488065 SSH2Q76I76 1423 aa13.88□□□□□ -0.19
PITRM1-210ENST00000488065 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
PITRM1-210ENST00000488065 NLRP6P59044 892 aa13.87□□□□□ -0.19
PITRM1-210ENST00000488065 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
PITRM1-210ENST00000488065 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
PITRM1-210ENST00000488065 DIEXFQ68CQ4 756 aaKnown RBP13.87□□□□□ -0.19
PITRM1-210ENST00000488065 KRT27Q7Z3Y8 459 aa13.87□□□□□ -0.19
PITRM1-210ENST00000488065 GGNBP2Q9H3C7 697 aa13.87□□□□□ -0.19
PITRM1-210ENST00000488065 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
PITRM1-210ENST00000488065 FYB1O15117 783 aa13.86□□□□□ -0.19
PITRM1-210ENST00000488065 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
PITRM1-210ENST00000488065 SF3B2Q13435 895 aaKnown RBP13.86□□□□□ -0.19
PITRM1-210ENST00000488065 FAM98CQ17RN3 349 aaKnown RBP13.86□□□□□ -0.19
PITRM1-210ENST00000488065 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
PITRM1-210ENST00000488065 NLRP13Q86W25 1043 aa13.86□□□□□ -0.19
PITRM1-210ENST00000488065 COG3Q96JB2 828 aa13.86□□□□□ -0.19
PITRM1-210ENST00000488065 NRKQ7Z2Y5 1582 aa13.86□□□□□ -0.19
PITRM1-210ENST00000488065 NSD2O96028 1365 aa13.85□□□□□ -0.19
PITRM1-210ENST00000488065 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
PITRM1-210ENST00000488065 ANP32CO43423 234 aa13.84□□□□□ -0.19
PITRM1-210ENST00000488065 BTG4Q9NY30 223 aa13.84□□□□□ -0.19
PITRM1-210ENST00000488065 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.19
PITRM1-210ENST00000488065 KIF20BQ96Q89 1820 aa13.83□□□□□ -0.2
PITRM1-210ENST00000488065 ONECUT3O60422 494 aaPredicted RBP13.82□□□□□ -0.2
PITRM1-210ENST00000488065 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
PITRM1-210ENST00000488065 USP31Q70CQ4 1352 aa13.82□□□□□ -0.2
PITRM1-210ENST00000488065 SOX12O15370 315 aa13.81□□□□□ -0.2
PITRM1-210ENST00000488065 TNNT2P45379 298 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-210ENST00000488065 PIK3C2AO00443 1686 aa13.81□□□□□ -0.2
PITRM1-210ENST00000488065 EN1Q05925 392 aaPredicted RBP13.8□□□□□ -0.2
PITRM1-210ENST00000488065 RALBP1Q15311 655 aa13.8□□□□□ -0.2
PITRM1-210ENST00000488065 KCNH5Q8NCM2 988 aa13.8□□□□□ -0.2
PITRM1-210ENST00000488065 BAG6P46379 1132 aa13.79□□□□□ -0.2
PITRM1-210ENST00000488065 OVOS2A0A0J9YW53 1432 aa13.79□□□□□ -0.2
PITRM1-210ENST00000488065 OVOS2Q6IE36 1432 aa13.79□□□□□ -0.2
PITRM1-210ENST00000488065 RREB1Q92766 1687 aa13.79□□□□□ -0.2
PITRM1-210ENST00000488065 NUP188Q5SRE5 1749 aa13.78□□□□□ -0.2
PITRM1-210ENST00000488065 SPATA31A5Q5VU36 1347 aa13.78□□□□□ -0.2
PITRM1-210ENST00000488065 SPATA31A7Q8IWB4 1347 aa13.78□□□□□ -0.2
PITRM1-210ENST00000488065 KIAA0232Q92628 1395 aa13.78□□□□□ -0.2
PITRM1-210ENST00000488065 ZBTB7CA1YPR0 619 aa13.77□□□□□ -0.21
PITRM1-210ENST00000488065 USP19O94966 1318 aa13.77□□□□□ -0.21
PITRM1-210ENST00000488065 GCP02774 474 aa13.77□□□□□ -0.21
PITRM1-210ENST00000488065 R3HDM1Q15032 1099 aaKnown RBP13.77□□□□□ -0.21
PITRM1-210ENST00000488065 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
PITRM1-210ENST00000488065 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.21
PITRM1-210ENST00000488065 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
PITRM1-210ENST00000488065 DISP2A7MBM2 1401 aa13.76□□□□□ -0.21
PITRM1-210ENST00000488065 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
PITRM1-210ENST00000488065 PRDM11Q9NQV5 511 aa13.76□□□□□ -0.21
PITRM1-210ENST00000488065 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
PITRM1-210ENST00000488065 EZH2Q15910 746 aaKnown RBP13.75□□□□□ -0.21
PITRM1-210ENST00000488065 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
PITRM1-210ENST00000488065 SLIT3O75094 1523 aa13.74□□□□□ -0.21
PITRM1-210ENST00000488065 MYBBP1AQ9BQG0 1328 aaKnown RBP13.74□□□□□ -0.21
PITRM1-210ENST00000488065 FBLN1P23142 703 aa13.74□□□□□ -0.21
PITRM1-210ENST00000488065 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
PITRM1-210ENST00000488065 ZC3H6P61129 1189 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms