RNA–Protein interactions for RNA: ENST00000488065.1

PITRM1-210, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 5

Gene PITRM1, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-210ENST00000488065 AEBP2Q6ZN18 517 aaPredicted RBP27.12■■□□□ 1.93
PITRM1-210ENST00000488065 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
PITRM1-210ENST00000488065 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
PITRM1-210ENST00000488065 SENP3Q9H4L4 574 aaPredicted RBP23.01■■□□□ 1.27
PITRM1-210ENST00000488065 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
PITRM1-210ENST00000488065 ABCC9O60706 1549 aa21.71■■□□□ 1.07
PITRM1-210ENST00000488065 FOXD1Q16676 465 aa21.56■■□□□ 1.04
PITRM1-210ENST00000488065 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
PITRM1-210ENST00000488065 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
PITRM1-210ENST00000488065 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
PITRM1-210ENST00000488065 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
PITRM1-210ENST00000488065 NACADO15069 1562 aa20.31■□□□□ 0.84
PITRM1-210ENST00000488065 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
PITRM1-210ENST00000488065 PPP6R1Q9UPN7 881 aa20.18■□□□□ 0.82
PITRM1-210ENST00000488065 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
PITRM1-210ENST00000488065 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
PITRM1-210ENST00000488065 ADRA2BP18089 450 aa20.11■□□□□ 0.81
PITRM1-210ENST00000488065 PIAS4Q8N2W9 510 aaPredicted RBP20.1■□□□□ 0.81
PITRM1-210ENST00000488065 MSH5O43196 834 aa20.07■□□□□ 0.8
PITRM1-210ENST00000488065 POTEDQ86YR6 584 aa20.03■□□□□ 0.8
PITRM1-210ENST00000488065 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
PITRM1-210ENST00000488065 ZCCHC6Q5VYS8 1495 aaKnown RBP19.94■□□□□ 0.78
PITRM1-210ENST00000488065 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
PITRM1-210ENST00000488065 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
PITRM1-210ENST00000488065 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
PITRM1-210ENST00000488065 CC2D2AQ9P2K1 1620 aa19.61■□□□□ 0.73
PITRM1-210ENST00000488065 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
PITRM1-210ENST00000488065 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
PITRM1-210ENST00000488065 EIF4G1Q04637 1599 aaKnown RBP19.52■□□□□ 0.71
PITRM1-210ENST00000488065 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
PITRM1-210ENST00000488065 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
PITRM1-210ENST00000488065 CUX2O14529 1486 aa18.71■□□□□ 0.59
PITRM1-210ENST00000488065 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
PITRM1-210ENST00000488065 SMARCA4P51532 1647 aa18.7■□□□□ 0.58
PITRM1-210ENST00000488065 ATAD2BQ9ULI0 1458 aa18.7■□□□□ 0.58
PITRM1-210ENST00000488065 HMGXB3Q12766 1538 aa18.64■□□□□ 0.58
PITRM1-210ENST00000488065 NESP48681 1621 aa18.63■□□□□ 0.57
PITRM1-210ENST00000488065 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
PITRM1-210ENST00000488065 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
PITRM1-210ENST00000488065 MAPK8IP2Q13387 824 aaPredicted RBP18.52■□□□□ 0.56
PITRM1-210ENST00000488065 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
PITRM1-210ENST00000488065 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
PITRM1-210ENST00000488065 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
PITRM1-210ENST00000488065 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
PITRM1-210ENST00000488065 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
PITRM1-210ENST00000488065 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
PITRM1-210ENST00000488065 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
PITRM1-210ENST00000488065 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
PITRM1-210ENST00000488065 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
PITRM1-210ENST00000488065 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
PITRM1-210ENST00000488065 WIZO95785 1651 aa18.23■□□□□ 0.51
PITRM1-210ENST00000488065 PDS5BQ9NTI5 1447 aa18.22■□□□□ 0.51
PITRM1-210ENST00000488065 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
PITRM1-210ENST00000488065 WDR62O43379 1518 aa18.15■□□□□ 0.5
PITRM1-210ENST00000488065 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
PITRM1-210ENST00000488065 TOP2AP11388 1531 aaKnown RBP18.05■□□□□ 0.48
PITRM1-210ENST00000488065 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
PITRM1-210ENST00000488065 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
PITRM1-210ENST00000488065 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
PITRM1-210ENST00000488065 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
PITRM1-210ENST00000488065 CFTRP13569 1480 aa17.94■□□□□ 0.46
PITRM1-210ENST00000488065 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
PITRM1-210ENST00000488065 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
PITRM1-210ENST00000488065 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
PITRM1-210ENST00000488065 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
PITRM1-210ENST00000488065 RIMBP3CA6NJZ7 1639 aa17.72■□□□□ 0.43
PITRM1-210ENST00000488065 RIMBP3BA6NNM3 1639 aa17.72■□□□□ 0.43
PITRM1-210ENST00000488065 RIMBP3Q9UFD9 1639 aa17.72■□□□□ 0.43
PITRM1-210ENST00000488065 OSCARQ8IYS5 282 aa17.71■□□□□ 0.43
PITRM1-210ENST00000488065 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
PITRM1-210ENST00000488065 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
PITRM1-210ENST00000488065 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
PITRM1-210ENST00000488065 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
PITRM1-210ENST00000488065 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
PITRM1-210ENST00000488065 CHD1O14646 1710 aa17.59■□□□□ 0.41
PITRM1-210ENST00000488065 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
PITRM1-210ENST00000488065 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
PITRM1-210ENST00000488065 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
PITRM1-210ENST00000488065 TARBP1Q13395 1621 aaKnown RBP17.55■□□□□ 0.4
PITRM1-210ENST00000488065 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
PITRM1-210ENST00000488065 POLA1P09884 1462 aaPredicted RBP17.48■□□□□ 0.39
PITRM1-210ENST00000488065 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
PITRM1-210ENST00000488065 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
PITRM1-210ENST00000488065 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
PITRM1-210ENST00000488065 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
PITRM1-210ENST00000488065 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
PITRM1-210ENST00000488065 FBLN2P98095 1184 aa17.36■□□□□ 0.37
PITRM1-210ENST00000488065 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
PITRM1-210ENST00000488065 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
PITRM1-210ENST00000488065 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
PITRM1-210ENST00000488065 TDRD9Q8NDG6 1382 aaKnown RBP17.34■□□□□ 0.37
PITRM1-210ENST00000488065 CUX1P39880 1505 aa17.32■□□□□ 0.36
PITRM1-210ENST00000488065 CLASP1Q7Z460 1538 aa17.32■□□□□ 0.36
PITRM1-210ENST00000488065 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
PITRM1-210ENST00000488065 SOGA1O94964 1423 aa17.3■□□□□ 0.36
PITRM1-210ENST00000488065 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
PITRM1-210ENST00000488065 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
PITRM1-210ENST00000488065 TRHP20396 242 aaPredicted RBP17.26■□□□□ 0.35
PITRM1-210ENST00000488065 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
PITRM1-210ENST00000488065 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms