RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 NUTM2GQ5VZR2 741 aa12.33□□□□□ -0.44
PRKCB-208ENST00000487674 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
PRKCB-208ENST00000487674 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
PRKCB-208ENST00000487674 STRN4Q9NRL3 753 aa12.32□□□□□ -0.44
PRKCB-208ENST00000487674 USP6P35125 1406 aa12.31□□□□□ -0.44
PRKCB-208ENST00000487674 SLIT3O75094 1523 aa12.31□□□□□ -0.44
PRKCB-208ENST00000487674 PIK3C2AO00443 1686 aa12.3□□□□□ -0.44
PRKCB-208ENST00000487674 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-208ENST00000487674 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
PRKCB-208ENST00000487674 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
PRKCB-208ENST00000487674 NLRP13Q86W25 1043 aa12.3□□□□□ -0.44
PRKCB-208ENST00000487674 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
PRKCB-208ENST00000487674 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
PRKCB-208ENST00000487674 PARP4Q9UKK3 1724 aaKnown RBP12.3□□□□□ -0.44
PRKCB-208ENST00000487674 EVA1CP58658 441 aa12.29□□□□□ -0.44
PRKCB-208ENST00000487674 L3MBTL2Q969R5 705 aa12.29□□□□□ -0.44
PRKCB-208ENST00000487674 GCP02774 474 aa12.28□□□□□ -0.44
PRKCB-208ENST00000487674 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-208ENST00000487674 FAM196AQ6ZSG2 479 aa12.28□□□□□ -0.44
PRKCB-208ENST00000487674 USP35Q9P2H5 1018 aa12.28□□□□□ -0.44
PRKCB-208ENST00000487674 RREB1Q92766 1687 aa12.28□□□□□ -0.44
PRKCB-208ENST00000487674 PARD3Q8TEW0 1356 aa12.28□□□□□ -0.44
PRKCB-208ENST00000487674 AKAP12Q02952 1782 aa12.28□□□□□ -0.44
PRKCB-208ENST00000487674 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
PRKCB-208ENST00000487674 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.45
PRKCB-208ENST00000487674 TCP11L2Q8N4U5 519 aa12.27□□□□□ -0.45
PRKCB-208ENST00000487674 EVC2Q86UK5 1308 aa12.27□□□□□ -0.45
PRKCB-208ENST00000487674 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
PRKCB-208ENST00000487674 WNK3Q9BYP7 1800 aa12.26□□□□□ -0.45
PRKCB-208ENST00000487674 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-208ENST00000487674 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
PRKCB-208ENST00000487674 THRAP3Q9Y2W1 955 aaKnown RBP12.26□□□□□ -0.45
PRKCB-208ENST00000487674 AATKQ6ZMQ8 1374 aa12.26□□□□□ -0.45
PRKCB-208ENST00000487674 CRB1P82279 1406 aa12.26□□□□□ -0.45
PRKCB-208ENST00000487674 LRRC37A3O60309 1634 aa12.26□□□□□ -0.45
PRKCB-208ENST00000487674 NUP188Q5SRE5 1749 aa12.25□□□□□ -0.45
PRKCB-208ENST00000487674 COL18A1P39060 1754 aa12.25□□□□□ -0.45
PRKCB-208ENST00000487674 TRIM37O94972 964 aa12.25□□□□□ -0.45
PRKCB-208ENST00000487674 PDE3BQ13370 1112 aa12.25□□□□□ -0.45
PRKCB-208ENST00000487674 NLRP6P59044 892 aa12.24□□□□□ -0.45
PRKCB-208ENST00000487674 CPSF1Q10570 1443 aaKnown RBP12.24□□□□□ -0.45
PRKCB-208ENST00000487674 CAMKK2Q96RR4 588 aa12.24□□□□□ -0.45
PRKCB-208ENST00000487674 PEAK1Q9H792 1746 aa12.24□□□□□ -0.45
PRKCB-208ENST00000487674 RGPD3A6NKT7 1758 aaPredicted RBP12.23□□□□□ -0.45
PRKCB-208ENST00000487674 RGPD4Q7Z3J3 1758 aa12.23□□□□□ -0.45
PRKCB-208ENST00000487674 MON2Q7Z3U7 1717 aa12.23□□□□□ -0.45
PRKCB-208ENST00000487674 EZH2Q15910 746 aaKnown RBP12.23□□□□□ -0.45
PRKCB-208ENST00000487674 SIN3AQ96ST3 1273 aa12.23□□□□□ -0.45
PRKCB-208ENST00000487674 ABCC6O95255 1503 aa12.22□□□□□ -0.45
PRKCB-208ENST00000487674 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
PRKCB-208ENST00000487674 OVOS2A0A0J9YW53 1432 aa12.22□□□□□ -0.45
PRKCB-208ENST00000487674 OVOS2Q6IE36 1432 aa12.22□□□□□ -0.45
PRKCB-208ENST00000487674 SBNO2Q9Y2G9 1366 aa12.22□□□□□ -0.45
PRKCB-208ENST00000487674 C11orf95C9JLR9 678 aaPredicted RBP12.22□□□□□ -0.45
PRKCB-208ENST00000487674 APBA3O96018 575 aa12.22□□□□□ -0.45
PRKCB-208ENST00000487674 R3HDM1Q15032 1099 aaKnown RBP12.22□□□□□ -0.45
PRKCB-208ENST00000487674 NFAT5O94916 1531 aa12.21□□□□□ -0.45
PRKCB-208ENST00000487674 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.45
PRKCB-208ENST00000487674 ZBTB7CA1YPR0 619 aa12.21□□□□□ -0.45
PRKCB-208ENST00000487674 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
PRKCB-208ENST00000487674 LHX8Q68G74 356 aa12.21□□□□□ -0.45
PRKCB-208ENST00000487674 USP54Q70EL1 1684 aa12.21□□□□□ -0.45
PRKCB-208ENST00000487674 SBF2Q86WG5 1849 aa12.21□□□□□ -0.46
PRKCB-208ENST00000487674 TTC21BQ7Z4L5 1316 aa12.2□□□□□ -0.46
PRKCB-208ENST00000487674 RGPD5Q99666 1765 aa12.2□□□□□ -0.46
PRKCB-208ENST00000487674 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
PRKCB-208ENST00000487674 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
PRKCB-208ENST00000487674 TOM1L2Q6ZVM7 507 aa12.19□□□□□ -0.46
PRKCB-208ENST00000487674 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
PRKCB-208ENST00000487674 KTN1Q86UP2 1357 aaKnown RBP12.18□□□□□ -0.46
PRKCB-208ENST00000487674 ARHGEF25Q86VW2 580 aa12.18□□□□□ -0.46
PRKCB-208ENST00000487674 DDB1Q16531 1140 aa12.17□□□□□ -0.46
PRKCB-208ENST00000487674 CDCA7Q9BWT1 371 aaPredicted RBP12.17□□□□□ -0.46
PRKCB-208ENST00000487674 BCL9O00512 1426 aa12.17□□□□□ -0.46
PRKCB-208ENST00000487674 CD163L1Q9NR16 1453 aa12.16□□□□□ -0.46
PRKCB-208ENST00000487674 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
PRKCB-208ENST00000487674 LTN1O94822 1766 aa12.15□□□□□ -0.46
PRKCB-208ENST00000487674 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
PRKCB-208ENST00000487674 CARD11Q9BXL7 1154 aa12.15□□□□□ -0.46
PRKCB-208ENST00000487674 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
PRKCB-208ENST00000487674 USP31Q70CQ4 1352 aa12.15□□□□□ -0.46
PRKCB-208ENST00000487674 CCDC7Q96M83 1385 aa12.15□□□□□ -0.46
PRKCB-208ENST00000487674 TNS2Q63HR2 1409 aa12.14□□□□□ -0.47
PRKCB-208ENST00000487674 SOX12O15370 315 aa12.14□□□□□ -0.47
PRKCB-208ENST00000487674 CARD10Q9BWT7 1032 aa12.14□□□□□ -0.47
PRKCB-208ENST00000487674 TONSLQ96HA7 1378 aa12.14□□□□□ -0.47
PRKCB-208ENST00000487674 EDC4Q6P2E9 1401 aaKnown RBP12.13□□□□□ -0.47
PRKCB-208ENST00000487674 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
PRKCB-208ENST00000487674 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
PRKCB-208ENST00000487674 PLSCR1O15162 318 aa12.12□□□□□ -0.47
PRKCB-208ENST00000487674 MARCH10Q8NA82 808 aaPredicted RBP12.12□□□□□ -0.47
PRKCB-208ENST00000487674 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
PRKCB-208ENST00000487674 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
PRKCB-208ENST00000487674 CASZ1Q86V15 1759 aa12.12□□□□□ -0.47
PRKCB-208ENST00000487674 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
PRKCB-208ENST00000487674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.47
PRKCB-208ENST00000487674 ERBB3P21860 1342 aa12.11□□□□□ -0.47
PRKCB-208ENST00000487674 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
PRKCB-208ENST00000487674 A0A1W2PP64 1363 aa12.1□□□□□ -0.47
PRKCB-208ENST00000487674 NINLQ9Y2I6 1382 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms