RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 FANCAO15360 1455 aa8.58□□□□□ -1.04
R3HDM1-218ENST00000487294 POGZQ7Z3K3 1410 aa8.58□□□□□ -1.04
R3HDM1-218ENST00000487294 PLEKHD1A6NEE1 506 aa8.58□□□□□ -1.04
R3HDM1-218ENST00000487294 ARID3CA6NKF2 412 aa8.58□□□□□ -1.04
R3HDM1-218ENST00000487294 Q3C1V9 767 aa8.58□□□□□ -1.04
R3HDM1-218ENST00000487294 CYP4X1Q8N118 509 aa8.58□□□□□ -1.04
R3HDM1-218ENST00000487294 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
R3HDM1-218ENST00000487294 EFCAB5A4FU69 1503 aa8.58□□□□□ -1.04
R3HDM1-218ENST00000487294 FDX1P10109 184 aa8.57□□□□□ -1.04
R3HDM1-218ENST00000487294 CTC1Q2NKJ3 1217 aa8.57□□□□□ -1.04
R3HDM1-218ENST00000487294 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
R3HDM1-218ENST00000487294 KDM4CQ9H3R0 1056 aa8.57□□□□□ -1.04
R3HDM1-218ENST00000487294 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
R3HDM1-218ENST00000487294 ARID4BQ4LE39 1312 aaPredicted RBP8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 PLCH2O75038 1416 aa8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 ZFYVE16Q7Z3T8 1539 aa8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 ZBTB24O43167 697 aaPredicted RBP8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 TTC37Q6PGP7 1564 aa8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 RIMS1Q86UR5 1692 aaKnown RBP8.55□□□□□ -1.04
R3HDM1-218ENST00000487294 YEATS2Q9ULM3 1422 aa8.54□□□□□ -1.04
R3HDM1-218ENST00000487294 SIGLEC1Q9BZZ2 1709 aa8.54□□□□□ -1.04
R3HDM1-218ENST00000487294 AXIN1O15169 862 aa8.54□□□□□ -1.04
R3HDM1-218ENST00000487294 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
R3HDM1-218ENST00000487294 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
R3HDM1-218ENST00000487294 RSBN1LQ6PCB5 846 aaPredicted RBP8.53□□□□□ -1.04
R3HDM1-218ENST00000487294 FAM117AQ9C073 453 aa8.53□□□□□ -1.04
R3HDM1-218ENST00000487294 HECW1Q76N89 1606 aa8.53□□□□□ -1.04
R3HDM1-218ENST00000487294 ARHGEF12Q9NZN5 1544 aa8.53□□□□□ -1.04
R3HDM1-218ENST00000487294 WNT7AO00755 349 aa8.52□□□□□ -1.05
R3HDM1-218ENST00000487294 SPTLC1O15269 473 aa8.52□□□□□ -1.05
R3HDM1-218ENST00000487294 GJA5P36382 358 aa8.52□□□□□ -1.05
R3HDM1-218ENST00000487294 MMP16P51512 607 aa8.52□□□□□ -1.05
R3HDM1-218ENST00000487294 PCDHB15Q9Y5E8 787 aa8.52□□□□□ -1.05
R3HDM1-218ENST00000487294 SCAPERQ9BY12 1400 aa8.52□□□□□ -1.05
R3HDM1-218ENST00000487294 ATP10AO60312 1499 aa8.51□□□□□ -1.05
R3HDM1-218ENST00000487294 TTC24A2A3L6 582 aaPredicted RBP8.51□□□□□ -1.05
R3HDM1-218ENST00000487294 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
R3HDM1-218ENST00000487294 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
R3HDM1-218ENST00000487294 LCE2AQ5TA79 106 aaPredicted RBP8.51□□□□□ -1.05
R3HDM1-218ENST00000487294 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
R3HDM1-218ENST00000487294 RETREG3Q86VR2 466 aa8.51□□□□□ -1.05
R3HDM1-218ENST00000487294 HSPA2P54652 639 aa8.5□□□□□ -1.05
R3HDM1-218ENST00000487294 TRIM32Q13049 653 aa8.5□□□□□ -1.05
R3HDM1-218ENST00000487294 C9orf84Q5VXU9 1444 aa8.5□□□□□ -1.05
R3HDM1-218ENST00000487294 REREQ9P2R6 1566 aa8.5□□□□□ -1.05
R3HDM1-218ENST00000487294 GMPR2Q9P2T1 348 aaKnown RBP8.5□□□□□ -1.05
R3HDM1-218ENST00000487294 FER1L4A9Z1Z3 1794 aa8.5□□□□□ -1.05
R3HDM1-218ENST00000487294 KDM5CP41229 1560 aa8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 FMN1Q68DA7 1419 aa8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 PLEKHG3A1L390 1219 aa8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 EFCAB2Q5VUJ9 269 aa8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 SNIP1Q8TAD8 396 aaKnown RBP8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 LIMD1Q9UGP4 676 aa8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 ZNF518AQ6AHZ1 1483 aa8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 CDK13Q14004 1512 aaKnown RBP8.49□□□□□ -1.05
R3HDM1-218ENST00000487294 SETD1BQ9UPS6 1966 aaKnown RBP8.48□□□□□ -1.05
R3HDM1-218ENST00000487294 BRPF1P55201 1214 aaPredicted RBP8.48□□□□□ -1.05
R3HDM1-218ENST00000487294 MTMR2Q13614 643 aa8.48□□□□□ -1.05
R3HDM1-218ENST00000487294 NEUROD2Q15784 382 aa8.48□□□□□ -1.05
R3HDM1-218ENST00000487294 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
R3HDM1-218ENST00000487294 PREX1Q8TCU6 1659 aa8.48□□□□□ -1.05
R3HDM1-218ENST00000487294 MYO5CQ9NQX4 1742 aa8.47□□□□□ -1.05
R3HDM1-218ENST00000487294 C11orf95C9JLR9 678 aaPredicted RBP8.47□□□□□ -1.05
R3HDM1-218ENST00000487294 HRCP23327 699 aa8.47□□□□□ -1.05
R3HDM1-218ENST00000487294 CSPP1Q1MSJ5 1256 aa8.47□□□□□ -1.05
R3HDM1-218ENST00000487294 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
R3HDM1-218ENST00000487294 CDK11AQ9UQ88 783 aaPredicted RBP8.47□□□□□ -1.05
R3HDM1-218ENST00000487294 TROQ12816 1431 aaPredicted RBP8.46□□□□□ -1.05
R3HDM1-218ENST00000487294 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.05
R3HDM1-218ENST00000487294 AGLP35573 1532 aa8.46□□□□□ -1.05
R3HDM1-218ENST00000487294 SMPD1P17405 629 aa8.46□□□□□ -1.06
R3HDM1-218ENST00000487294 JUNDP17535 347 aa8.46□□□□□ -1.06
R3HDM1-218ENST00000487294 TUSC1Q2TAM9 212 aa8.46□□□□□ -1.06
R3HDM1-218ENST00000487294 POLR3EQ9NVU0 708 aa8.46□□□□□ -1.06
R3HDM1-218ENST00000487294 ARHGAP35Q9NRY4 1499 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 KIF14Q15058 1648 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 SPDYE5A6NIY4 337 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 WFS1O76024 890 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 QPCTQ16769 361 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 PRPF38BQ5VTL8 546 aaKnown RBP8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 PRR7Q8TB68 274 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 CABLES1Q8TDN4 633 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 ZBTB3Q9H5J0 574 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 STRCQ7RTU9 1775 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 PTPRTO14522 1441 aa8.45□□□□□ -1.06
R3HDM1-218ENST00000487294 RANGAP1P46060 587 aaPredicted RBP8.44□□□□□ -1.06
R3HDM1-218ENST00000487294 MLECQ14165 292 aa8.44□□□□□ -1.06
R3HDM1-218ENST00000487294 MRGPRX2Q96LB1 330 aa8.44□□□□□ -1.06
R3HDM1-218ENST00000487294 UHRF1BP1Q6BDS2 1440 aa8.44□□□□□ -1.06
R3HDM1-218ENST00000487294 DIP2CQ9Y2E4 1556 aa8.44□□□□□ -1.06
R3HDM1-218ENST00000487294 CFAP99D6REC4 459 aa8.43□□□□□ -1.06
R3HDM1-218ENST00000487294 LILRB3O75022 631 aa8.43□□□□□ -1.06
R3HDM1-218ENST00000487294 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
R3HDM1-218ENST00000487294 AFAP1Q8N556 730 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms