RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 MSH6P52701 1360 aa28.27■■■□□ 2.12
TRADD-202ENST00000486556 HMOX1P09601 288 aa28.27■■■□□ 2.12
TRADD-202ENST00000486556 RIPK4P57078 832 aa28.27■■■□□ 2.12
TRADD-202ENST00000486556 PEAK1Q9H792 1746 aa28.26■■■□□ 2.11
TRADD-202ENST00000486556 NUTM2GQ5VZR2 741 aa28.26■■■□□ 2.11
TRADD-202ENST00000486556 PPP4R2Q9NY27 417 aa28.26■■■□□ 2.11
TRADD-202ENST00000486556 MARF1Q9Y4F3 1742 aaKnown RBP28.26■■■□□ 2.11
TRADD-202ENST00000486556 TRIM35Q9UPQ4 493 aa28.25■■■□□ 2.11
TRADD-202ENST00000486556 KCNH5Q8NCM2 988 aa28.25■■■□□ 2.11
TRADD-202ENST00000486556 KRT28Q7Z3Y7 464 aa28.24■■■□□ 2.11
TRADD-202ENST00000486556 MYH16Q9H6N6 1097 aa28.24■■■□□ 2.11
TRADD-202ENST00000486556 IL16Q14005 1332 aa28.23■■■□□ 2.11
TRADD-202ENST00000486556 NFE2L2Q16236 605 aa28.22■■■□□ 2.11
TRADD-202ENST00000486556 PHACTR3Q96KR7 559 aa28.21■■■□□ 2.11
TRADD-202ENST00000486556 HOXC9P31274 260 aa28.19■■■□□ 2.1
TRADD-202ENST00000486556 RTL1A6NKG5 1358 aa28.19■■■□□ 2.1
TRADD-202ENST00000486556 SULT6B1Q6IMI4 303 aa28.18■■■□□ 2.1
TRADD-202ENST00000486556 ARHGEF10O15013 1369 aa28.17■■■□□ 2.1
TRADD-202ENST00000486556 ZNF335Q9H4Z2 1342 aaPredicted RBP28.17■■■□□ 2.1
TRADD-202ENST00000486556 RGPD1P0DJD0 1748 aa28.16■■■□□ 2.1
TRADD-202ENST00000486556 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.16■■■□□ 2.1
TRADD-202ENST00000486556 LMOD3Q0VAK6 560 aa28.15■■■□□ 2.1
TRADD-202ENST00000486556 TRPM3Q9HCF6 1732 aaPredicted RBP28.15■■■□□ 2.1
TRADD-202ENST00000486556 XPCQ01831 940 aaPredicted RBP28.15■■■□□ 2.1
TRADD-202ENST00000486556 CALD1Q05682 793 aaKnown RBP28.15■■■□□ 2.1
TRADD-202ENST00000486556 XIRP1Q702N8 1843 aaKnown RBP28.14■■■□□ 2.1
TRADD-202ENST00000486556 NPHP3Q7Z494 1330 aa28.14■■■□□ 2.1
TRADD-202ENST00000486556 NFAT5O94916 1531 aa28.14■■■□□ 2.09
TRADD-202ENST00000486556 IP6K1Q92551 441 aa28.13■■■□□ 2.09
TRADD-202ENST00000486556 IGSF1Q8N6C5 1336 aa28.12■■■□□ 2.09
TRADD-202ENST00000486556 GCP02774 474 aa28.12■■■□□ 2.09
TRADD-202ENST00000486556 CT47B1P0C2W7 299 aaPredicted RBP28.12■■■□□ 2.09
TRADD-202ENST00000486556 KDRP35968 1356 aa28.12■■■□□ 2.09
TRADD-202ENST00000486556 USP19O94966 1318 aa28.11■■■□□ 2.09
TRADD-202ENST00000486556 AEBP1Q8IUX7 1158 aa28.11■■■□□ 2.09
TRADD-202ENST00000486556 SLIT3O75094 1523 aa28.11■■■□□ 2.09
TRADD-202ENST00000486556 EYA1Q99502 592 aa28.11■■■□□ 2.09
TRADD-202ENST00000486556 LMOD2Q6P5Q4 547 aa28.09■■■□□ 2.09
TRADD-202ENST00000486556 PLIN1O60240 522 aa28.08■■■□□ 2.09
TRADD-202ENST00000486556 FANCIQ9NVI1 1328 aa28.07■■■□□ 2.08
TRADD-202ENST00000486556 PHRF1Q9P1Y6 1649 aaKnown RBP28.07■■■□□ 2.08
TRADD-202ENST00000486556 ARHGEF25Q86VW2 580 aa28.06■■■□□ 2.08
TRADD-202ENST00000486556 LTN1O94822 1766 aa28.06■■■□□ 2.08
TRADD-202ENST00000486556 ALS2Q96Q42 1657 aa28.05■■■□□ 2.08
TRADD-202ENST00000486556 SLAIN2Q9P270 581 aa28.05■■■□□ 2.08
TRADD-202ENST00000486556 RARSP54136 660 aaKnown RBP28.03■■■□□ 2.08
TRADD-202ENST00000486556 BRINP3Q76B58 766 aa28.03■■■□□ 2.08
TRADD-202ENST00000486556 BCAR3O75815 825 aa28.02■■■□□ 2.08
TRADD-202ENST00000486556 GNAI1P63096 354 aa28.02■■■□□ 2.08
TRADD-202ENST00000486556 IFT57Q9NWB7 429 aa28.02■■■□□ 2.08
TRADD-202ENST00000486556 EXOC6Q8TAG9 804 aa28.02■■■□□ 2.08
TRADD-202ENST00000486556 TSR2Q969E8 191 aaKnown RBP28.02■■■□□ 2.08
TRADD-202ENST00000486556 DDX17Q92841 729 aaKnown RBP28■■■□□ 2.07
TRADD-202ENST00000486556 PXDNQ92626 1479 aa28■■■□□ 2.07
TRADD-202ENST00000486556 EXOSC9Q06265 439 aaKnown RBP27.99■■■□□ 2.07
TRADD-202ENST00000486556 B4GALNT3Q6L9W6 998 aa27.99■■■□□ 2.07
TRADD-202ENST00000486556 TNS3Q68CZ2 1445 aa27.99■■■□□ 2.07
TRADD-202ENST00000486556 DLG5Q8TDM6 1919 aa27.99■■■□□ 2.07
TRADD-202ENST00000486556 ZNF853P0CG23 659 aa27.99■■■□□ 2.07
TRADD-202ENST00000486556 SPATA31A3Q5VYP0 1347 aa27.99■■■□□ 2.07
TRADD-202ENST00000486556 GAS2L2Q8NHY3 880 aa27.98■■■□□ 2.07
TRADD-202ENST00000486556 LTV1Q96GA3 475 aaPredicted RBP27.98■■■□□ 2.07
TRADD-202ENST00000486556 CFAP44Q96MT7 982 aa27.98■■■□□ 2.07
TRADD-202ENST00000486556 CCDC136Q96JN2 1154 aa27.97■■■□□ 2.07
TRADD-202ENST00000486556 PDE3AQ14432 1141 aa27.95■■■□□ 2.07
TRADD-202ENST00000486556 MTHFSDQ2M296 383 aaKnown RBP27.95■■■□□ 2.07
TRADD-202ENST00000486556 ZNF428Q96B54 188 aa27.95■■■□□ 2.07
TRADD-202ENST00000486556 C20orf194Q5TEA3 1177 aa27.95■■■□□ 2.06
TRADD-202ENST00000486556 CRBNQ96SW2 442 aa27.95■■■□□ 2.06
TRADD-202ENST00000486556 THUMPD2Q9BTF0 503 aaKnown RBP27.95■■■□□ 2.06
TRADD-202ENST00000486556 ZBTB7CA1YPR0 619 aa27.94■■■□□ 2.06
TRADD-202ENST00000486556 HTATSF1O43719 755 aaKnown RBP27.94■■■□□ 2.06
TRADD-202ENST00000486556 LAS1LQ9Y4W2 734 aaKnown RBP27.94■■■□□ 2.06
TRADD-202ENST00000486556 MED1Q15648 1581 aaPredicted RBP27.93■■■□□ 2.06
TRADD-202ENST00000486556 FAM83GA6ND36 823 aa27.93■■■□□ 2.06
TRADD-202ENST00000486556 SOS2Q07890 1332 aaPredicted RBP27.93■■■□□ 2.06
TRADD-202ENST00000486556 NBPF6Q5VWK0 638 aa27.92■■■□□ 2.06
TRADD-202ENST00000486556 NBPF4Q96M43 638 aa27.92■■■□□ 2.06
TRADD-202ENST00000486556 RTF1Q92541 710 aaKnown RBP27.9■■■□□ 2.06
TRADD-202ENST00000486556 DCTN1Q14203 1278 aa27.9■■■□□ 2.06
TRADD-202ENST00000486556 PLEKHG5O94827 1062 aa27.89■■■□□ 2.06
TRADD-202ENST00000486556 CANXP27824 592 aaKnown RBP27.89■■■□□ 2.06
TRADD-202ENST00000486556 MBIPQ9NS73 344 aa27.89■■■□□ 2.06
TRADD-202ENST00000486556 ANKRD24Q8TF21 1146 aa27.88■■■□□ 2.05
TRADD-202ENST00000486556 ZC3H6P61129 1189 aaKnown RBP27.88■■■□□ 2.05
TRADD-202ENST00000486556 ALDH1L2Q3SY69 923 aa27.88■■■□□ 2.05
TRADD-202ENST00000486556 AXIN2Q9Y2T1 843 aa27.87■■■□□ 2.05
TRADD-202ENST00000486556 MCM10Q7L590 875 aa27.86■■■□□ 2.05
TRADD-202ENST00000486556 CHL1O00533 1208 aa27.85■■■□□ 2.05
TRADD-202ENST00000486556 FRAT1Q92837 279 aaPredicted RBP27.85■■■□□ 2.05
TRADD-202ENST00000486556 NCAPD2Q15021 1401 aa27.85■■■□□ 2.05
TRADD-202ENST00000486556 GNAT3A8MTJ3 354 aa27.85■■■□□ 2.05
TRADD-202ENST00000486556 USHBP1Q8N6Y0 703 aa27.84■■■□□ 2.05
TRADD-202ENST00000486556 SMC4Q9NTJ3 1288 aa27.84■■■□□ 2.05
TRADD-202ENST00000486556 MS4A1P11836 297 aa27.83■■■□□ 2.05
TRADD-202ENST00000486556 SSH1Q8WYL5 1049 aa27.83■■■□□ 2.05
TRADD-202ENST00000486556 ABCC6O95255 1503 aa27.83■■■□□ 2.05
TRADD-202ENST00000486556 CPDO75976 1380 aa27.83■■■□□ 2.05
TRADD-202ENST00000486556 VAMP4O75379 141 aa27.83■■■□□ 2.05
TRADD-202ENST00000486556 BRPF1P55201 1214 aaPredicted RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms