RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 MARF1Q9Y4F3 1742 aaKnown RBP28.51■■■□□ 2.15
CDK5-204ENST00000485972 WDR63Q8IWG1 891 aa28.5■■■□□ 2.15
CDK5-204ENST00000485972 KCNH5Q8NCM2 988 aa28.5■■■□□ 2.15
CDK5-204ENST00000485972 XIRP1Q702N8 1843 aaKnown RBP28.5■■■□□ 2.15
CDK5-204ENST00000485972 IRX6P78412 446 aaPredicted RBP28.5■■■□□ 2.15
CDK5-204ENST00000485972 KIF24Q5T7B8 1368 aa28.49■■■□□ 2.15
CDK5-204ENST00000485972 RNF123Q5XPI4 1314 aa28.49■■■□□ 2.15
CDK5-204ENST00000485972 NPHP3Q7Z494 1330 aa28.47■■■□□ 2.15
CDK5-204ENST00000485972 RIPK4P57078 832 aa28.47■■■□□ 2.15
CDK5-204ENST00000485972 DDX17Q92841 729 aaKnown RBP28.47■■■□□ 2.15
CDK5-204ENST00000485972 HOXC9P31274 260 aa28.46■■■□□ 2.15
CDK5-204ENST00000485972 PHACTR3Q96KR7 559 aa28.46■■■□□ 2.15
CDK5-204ENST00000485972 SLAIN2Q9P270 581 aa28.45■■■□□ 2.15
CDK5-204ENST00000485972 SULT6B1Q6IMI4 303 aa28.45■■■□□ 2.14
CDK5-204ENST00000485972 TRPM3Q9HCF6 1732 aaPredicted RBP28.44■■■□□ 2.14
CDK5-204ENST00000485972 TRIM35Q9UPQ4 493 aa28.44■■■□□ 2.14
CDK5-204ENST00000485972 GCP02774 474 aa28.43■■■□□ 2.14
CDK5-204ENST00000485972 BRINP3Q76B58 766 aa28.43■■■□□ 2.14
CDK5-204ENST00000485972 AEBP1Q8IUX7 1158 aa28.42■■■□□ 2.14
CDK5-204ENST00000485972 NFAT5O94916 1531 aa28.42■■■□□ 2.14
CDK5-204ENST00000485972 NFE2L2Q16236 605 aa28.42■■■□□ 2.14
CDK5-204ENST00000485972 RTL1A6NKG5 1358 aa28.41■■■□□ 2.14
CDK5-204ENST00000485972 PLEKHG5O94827 1062 aa28.41■■■□□ 2.14
CDK5-204ENST00000485972 USP19O94966 1318 aa28.41■■■□□ 2.14
CDK5-204ENST00000485972 IP6K1Q92551 441 aa28.39■■■□□ 2.14
CDK5-204ENST00000485972 ARHGEF10O15013 1369 aa28.39■■■□□ 2.14
CDK5-204ENST00000485972 ERICH6BQ5W0A0 696 aa28.39■■■□□ 2.13
CDK5-204ENST00000485972 SLIT3O75094 1523 aa28.38■■■□□ 2.13
CDK5-204ENST00000485972 RRP1P56182 461 aaKnown RBP28.37■■■□□ 2.13
CDK5-204ENST00000485972 EYA1Q99502 592 aa28.37■■■□□ 2.13
CDK5-204ENST00000485972 ZBTB7CA1YPR0 619 aa28.37■■■□□ 2.13
CDK5-204ENST00000485972 MYH16Q9H6N6 1097 aa28.37■■■□□ 2.13
CDK5-204ENST00000485972 IGSF1Q8N6C5 1336 aa28.35■■■□□ 2.13
CDK5-204ENST00000485972 ARHGEF25Q86VW2 580 aa28.35■■■□□ 2.13
CDK5-204ENST00000485972 LTV1Q96GA3 475 aaPredicted RBP28.35■■■□□ 2.13
CDK5-204ENST00000485972 RGPD1P0DJD0 1748 aa28.35■■■□□ 2.13
CDK5-204ENST00000485972 PXDNQ92626 1479 aa28.35■■■□□ 2.13
CDK5-204ENST00000485972 ALS2Q96Q42 1657 aa28.33■■■□□ 2.13
CDK5-204ENST00000485972 IL16Q14005 1332 aa28.33■■■□□ 2.13
CDK5-204ENST00000485972 TNS3Q68CZ2 1445 aa28.33■■■□□ 2.13
CDK5-204ENST00000485972 SPATA31A3Q5VYP0 1347 aa28.33■■■□□ 2.12
CDK5-204ENST00000485972 KDRP35968 1356 aa28.31■■■□□ 2.12
CDK5-204ENST00000485972 LMOD3Q0VAK6 560 aa28.3■■■□□ 2.12
CDK5-204ENST00000485972 LTN1O94822 1766 aa28.3■■■□□ 2.12
CDK5-204ENST00000485972 CALD1Q05682 793 aaKnown RBP28.27■■■□□ 2.12
CDK5-204ENST00000485972 MED1Q15648 1581 aaPredicted RBP28.27■■■□□ 2.12
CDK5-204ENST00000485972 SOS2Q07890 1332 aaPredicted RBP28.26■■■□□ 2.12
CDK5-204ENST00000485972 ZC3H6P61129 1189 aaKnown RBP28.26■■■□□ 2.11
CDK5-204ENST00000485972 PHRF1Q9P1Y6 1649 aaKnown RBP28.25■■■□□ 2.11
CDK5-204ENST00000485972 TSR2Q969E8 191 aaKnown RBP28.25■■■□□ 2.11
CDK5-204ENST00000485972 FANCIQ9NVI1 1328 aa28.25■■■□□ 2.11
CDK5-204ENST00000485972 PLIN1O60240 522 aa28.24■■■□□ 2.11
CDK5-204ENST00000485972 CABLES1Q8TDN4 633 aa28.24■■■□□ 2.11
CDK5-204ENST00000485972 THUMPD2Q9BTF0 503 aaKnown RBP28.24■■■□□ 2.11
CDK5-204ENST00000485972 PPP4R2Q9NY27 417 aa28.23■■■□□ 2.11
CDK5-204ENST00000485972 NBPF6Q5VWK0 638 aa28.22■■■□□ 2.11
CDK5-204ENST00000485972 NBPF4Q96M43 638 aa28.22■■■□□ 2.11
CDK5-204ENST00000485972 AXIN2Q9Y2T1 843 aa28.21■■■□□ 2.11
CDK5-204ENST00000485972 FAM83GA6ND36 823 aa28.2■■■□□ 2.11
CDK5-204ENST00000485972 MTHFSDQ2M296 383 aaKnown RBP28.2■■■□□ 2.11
CDK5-204ENST00000485972 USHBP1Q8N6Y0 703 aa28.2■■■□□ 2.11
CDK5-204ENST00000485972 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.2■■■□□ 2.11
CDK5-204ENST00000485972 ANKRD24Q8TF21 1146 aa28.19■■■□□ 2.1
CDK5-204ENST00000485972 LAS1LQ9Y4W2 734 aaKnown RBP28.19■■■□□ 2.1
CDK5-204ENST00000485972 GAS2L2Q8NHY3 880 aa28.19■■■□□ 2.1
CDK5-204ENST00000485972 LTBP4Q8N2S1 1624 aa28.19■■■□□ 2.1
CDK5-204ENST00000485972 BCAR3O75815 825 aa28.18■■■□□ 2.1
CDK5-204ENST00000485972 DCTN1Q14203 1278 aa28.18■■■□□ 2.1
CDK5-204ENST00000485972 IFT57Q9NWB7 429 aa28.18■■■□□ 2.1
CDK5-204ENST00000485972 GNAI1P63096 354 aa28.17■■■□□ 2.1
CDK5-204ENST00000485972 EXOSC9Q06265 439 aaKnown RBP28.17■■■□□ 2.1
CDK5-204ENST00000485972 CT47B1P0C2W7 299 aaPredicted RBP28.16■■■□□ 2.1
CDK5-204ENST00000485972 LRRC59Q96AG4 307 aaKnown RBP28.16■■■□□ 2.1
CDK5-204ENST00000485972 RARSP54136 660 aaKnown RBP28.16■■■□□ 2.1
CDK5-204ENST00000485972 ZNF853P0CG23 659 aa28.14■■■□□ 2.1
CDK5-204ENST00000485972 CFAP44Q96MT7 982 aa28.14■■■□□ 2.09
CDK5-204ENST00000485972 MCM10Q7L590 875 aa28.13■■■□□ 2.09
CDK5-204ENST00000485972 RTF1Q92541 710 aaKnown RBP28.12■■■□□ 2.09
CDK5-204ENST00000485972 DLG5Q8TDM6 1919 aa28.12■■■□□ 2.09
CDK5-204ENST00000485972 CPDO75976 1380 aa28.11■■■□□ 2.09
CDK5-204ENST00000485972 EXOC6Q8TAG9 804 aa28.11■■■□□ 2.09
CDK5-204ENST00000485972 ERBB3P21860 1342 aa28.11■■■□□ 2.09
CDK5-204ENST00000485972 KIAA0232Q92628 1395 aa28.11■■■□□ 2.09
CDK5-204ENST00000485972 CHRNA2Q15822 529 aa28.1■■■□□ 2.09
CDK5-204ENST00000485972 C20orf194Q5TEA3 1177 aa28.1■■■□□ 2.09
CDK5-204ENST00000485972 MBIPQ9NS73 344 aa28.1■■■□□ 2.09
CDK5-204ENST00000485972 NHSL1Q5SYE7 1610 aa28.09■■■□□ 2.09
CDK5-204ENST00000485972 HTATSF1O43719 755 aaKnown RBP28.09■■■□□ 2.09
CDK5-204ENST00000485972 HAP1P54257 671 aaPredicted RBP28.08■■■□□ 2.09
CDK5-204ENST00000485972 CRYBG1Q9Y4K1 1723 aa28.08■■■□□ 2.08
CDK5-204ENST00000485972 GNAT3A8MTJ3 354 aa28.07■■■□□ 2.08
CDK5-204ENST00000485972 NCAPD2Q15021 1401 aa28.07■■■□□ 2.08
CDK5-204ENST00000485972 B4GALNT3Q6L9W6 998 aa28.06■■■□□ 2.08
CDK5-204ENST00000485972 CRBNQ96SW2 442 aa28.06■■■□□ 2.08
CDK5-204ENST00000485972 CANXP27824 592 aaKnown RBP28.05■■■□□ 2.08
CDK5-204ENST00000485972 BCL2L13Q9BXK5 485 aa28.05■■■□□ 2.08
CDK5-204ENST00000485972 ABCC6O95255 1503 aa28.04■■■□□ 2.08
CDK5-204ENST00000485972 FRAT1Q92837 279 aaPredicted RBP28.04■■■□□ 2.08
CDK5-204ENST00000485972 PRDM11Q9NQV5 511 aa28.04■■■□□ 2.08
CDK5-204ENST00000485972 NLRP2Q9NX02 1062 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms