RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 CDV3Q9UKY7 258 aaKnown RBP3.99□□□□□ -1.77
ABCA4-206ENST00000484388 ESPNB1AK53 854 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 NCOA4Q13772 614 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 EML3Q32P44 896 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 ERFEQ4G0M1 354 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 C4orf48Q5BLP8 95 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 RNF20Q5VTR2 975 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 AEBP1Q8IUX7 1158 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 ANKLE1Q8NAG6 615 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 FOXJ1Q92949 421 aa3.98□□□□□ -1.77
ABCA4-206ENST00000484388 MKRN1Q9UHC7 482 aaKnown RBP3.98□□□□□ -1.77
ABCA4-206ENST00000484388 MAGEB6P1A0A0J9YX57 407 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 RNF223E7ERA6 249 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 GGCXP38435 758 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 RPIAP49247 311 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 SH3BP2P78314 561 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 PTK7Q13308 1070 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 AGERQ15109 404 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 NBPF20Q3BBV1 942 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 LINC01559Q495D7 138 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 LARP1Q6PKG0 1096 aaKnown RBP3.97□□□□□ -1.77
ABCA4-206ENST00000484388 TRIM50Q86XT4 487 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 SEPT12Q8IYM1 358 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 SLC10A4Q96EP9 437 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 CCDC85AQ96PX6 553 aaPredicted RBP3.97□□□□□ -1.77
ABCA4-206ENST00000484388 CARD14Q9BXL6 1004 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 ZMIZ1Q9ULJ6 1067 aa3.97□□□□□ -1.77
ABCA4-206ENST00000484388 CCDC9Q9Y3X0 531 aaKnown RBP3.97□□□□□ -1.77
ABCA4-206ENST00000484388 USP17L15C9J2P7 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L10C9JJH3 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L13C9JLJ4 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L12C9JPN9 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L11C9JVI0 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L21D6R901 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L18D6R9N7 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L22D6RA61 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L17D6RBQ6 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L19D6RCP7 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L20D6RJB6 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 PPEF1O14829 653 aaPredicted RBP3.96□□□□□ -1.78
ABCA4-206ENST00000484388 ZBTB24O43167 697 aaPredicted RBP3.96□□□□□ -1.78
ABCA4-206ENST00000484388 GIGYF1O75420 1035 aaPredicted RBP3.96□□□□□ -1.78
ABCA4-206ENST00000484388 RASA1P20936 1047 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 VARSP26640 1264 aaKnown RBP3.96□□□□□ -1.78
ABCA4-206ENST00000484388 ATP1A2P50993 1020 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 WNT7BP56706 349 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 USP17L24Q0WX57 530 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 CRTC2Q53ET0 693 aaPredicted RBP3.96□□□□□ -1.78
ABCA4-206ENST00000484388 TMEM164Q5U3C3 297 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 B4GALNT3Q6L9W6 998 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 DEPDC4Q8N2C3 294 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 LARGE2Q8N3Y3 721 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 RNF166Q96A37 237 aaPredicted RBP3.96□□□□□ -1.78
ABCA4-206ENST00000484388 CDCA7Q9BWT1 371 aaPredicted RBP3.96□□□□□ -1.78
ABCA4-206ENST00000484388 NOVA2Q9UNW9 492 aaKnown RBP3.96□□□□□ -1.78
ABCA4-206ENST00000484388 DOLKQ9UPQ8 538 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 NOD1Q9Y239 953 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 MAP4K5Q9Y4K4 846 aa3.96□□□□□ -1.78
ABCA4-206ENST00000484388 TRIM32Q13049 653 aa3.95□□□□□ -1.78
ABCA4-206ENST00000484388 TSGA10IPQ3SY00 556 aa3.95□□□□□ -1.78
ABCA4-206ENST00000484388 PLA2G2CQ5R387 149 aa3.95□□□□□ -1.78
ABCA4-206ENST00000484388 ANKMY2Q8IV38 441 aa3.95□□□□□ -1.78
ABCA4-206ENST00000484388 SPNS2Q8IVW8 549 aa3.95□□□□□ -1.78
ABCA4-206ENST00000484388 STK32AQ8WU08 396 aa3.95□□□□□ -1.78
ABCA4-206ENST00000484388 CLP1Q92989 425 aaKnown RBP3.95□□□□□ -1.78
ABCA4-206ENST00000484388 SIRT1Q96EB6 747 aa3.95□□□□□ -1.78
ABCA4-206ENST00000484388 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.95□□□□□ -1.78
ABCA4-206ENST00000484388 CARNS1A5YM72 827 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 ZBTB7BO15156 539 aaPredicted RBP3.94□□□□□ -1.78
ABCA4-206ENST00000484388 DKK1O94907 266 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 CLDN10P78369 228 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 SKOR1P84550 965 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 USP4Q13107 963 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 SWI5Q1ZZU3 235 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 SIX5Q8N196 739 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 OGFOD1Q8N543 542 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 MPNDQ8N594 471 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 FAM200AQ8TCP9 573 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 TRIM52Q96A61 297 aa3.94□□□□□ -1.78
ABCA4-206ENST00000484388 DNAAF2Q9NVR5 837 aaKnown RBP3.94□□□□□ -1.78
ABCA4-206ENST00000484388 GNEQ9Y223 722 aaKnown RBP3.94□□□□□ -1.78
ABCA4-206ENST00000484388 CD2BP2O95400 341 aaKnown RBP3.93□□□□□ -1.78
ABCA4-206ENST00000484388 SSFA2P28290 1259 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 GTF2IP78347 998 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 FAM69CQ0P6D2 419 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 DPYDQ12882 1025 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 OXLD1Q5BKU9 147 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 IFFO2Q5TF58 517 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 PPP1R18Q6NYC8 613 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 CDK15Q96Q40 435 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 KCTD15Q96SI1 283 aaPredicted RBP3.93□□□□□ -1.78
ABCA4-206ENST00000484388 GZF1Q9H116 711 aaPredicted RBP3.93□□□□□ -1.78
ABCA4-206ENST00000484388 PCDHGA11Q9Y5H2 935 aa3.93□□□□□ -1.78
ABCA4-206ENST00000484388 M0R2N6 131 aa3.92□□□□□ -1.78
ABCA4-206ENST00000484388 TMCO4Q5TGY1 634 aa3.92□□□□□ -1.78
ABCA4-206ENST00000484388 PHLDB3Q6NSJ2 640 aa3.92□□□□□ -1.78
ABCA4-206ENST00000484388 VASH1Q7L8A9 365 aaPredicted RBP3.92□□□□□ -1.78
ABCA4-206ENST00000484388 TXNDC2Q86VQ3 553 aa3.92□□□□□ -1.78
ABCA4-206ENST00000484388 C1orf216Q8TAB5 229 aa3.92□□□□□ -1.78
ABCA4-206ENST00000484388 PCDHB11Q9Y5F2 797 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms