RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 PHTF2Q8N3S3 785 aa8.26□□□□□ -1.09
FNDC3B-210ENST00000483344 EHBP1Q8NDI1 1231 aa8.26□□□□□ -1.09
FNDC3B-210ENST00000483344 FAM174AQ8TBP5 190 aa8.26□□□□□ -1.09
FNDC3B-210ENST00000483344 USP17L5A8MUK1 530 aa8.25□□□□□ -1.09
FNDC3B-210ENST00000483344 GIGYF1O75420 1035 aaPredicted RBP8.25□□□□□ -1.09
FNDC3B-210ENST00000483344 SLC19A1P41440 591 aa8.25□□□□□ -1.09
FNDC3B-210ENST00000483344 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
FNDC3B-210ENST00000483344 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 SRPK2P78362 688 aaKnown RBP8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 MAP7D1Q3KQU3 841 aa8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 RC3H1Q5TC82 1133 aaKnown RBP8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 USP17L2Q6R6M4 530 aa8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 PLEKHM2Q8IWE5 1019 aa8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 PLPP7Q8NBV4 271 aa8.24□□□□□ -1.09
FNDC3B-210ENST00000483344 LZTS3O60299 673 aaPredicted RBP8.23□□□□□ -1.09
FNDC3B-210ENST00000483344 VASH1Q7L8A9 365 aaPredicted RBP8.23□□□□□ -1.09
FNDC3B-210ENST00000483344 EMID1Q96A84 441 aaPredicted RBP8.23□□□□□ -1.09
FNDC3B-210ENST00000483344 VRTNQ9H8Y1 702 aa8.23□□□□□ -1.09
FNDC3B-210ENST00000483344 CHIC2Q9UKJ5 165 aa8.23□□□□□ -1.09
FNDC3B-210ENST00000483344 SEPT12Q8IYM1 358 aa8.22□□□□□ -1.09
FNDC3B-210ENST00000483344 DEPDC4Q8N2C3 294 aa8.22□□□□□ -1.09
FNDC3B-210ENST00000483344 KCTD15Q96SI1 283 aaPredicted RBP8.22□□□□□ -1.09
FNDC3B-210ENST00000483344 PRKD2Q9BZL6 878 aa8.22□□□□□ -1.09
FNDC3B-210ENST00000483344 MAP4K5Q9Y4K4 846 aa8.22□□□□□ -1.09
FNDC3B-210ENST00000483344 ESPNB1AK53 854 aa8.21□□□□□ -1.1
FNDC3B-210ENST00000483344 PDIA4P13667 645 aaKnown RBP8.21□□□□□ -1.1
FNDC3B-210ENST00000483344 NCOA4Q13772 614 aa8.21□□□□□ -1.1
FNDC3B-210ENST00000483344 CDCA8Q53HL2 280 aa8.21□□□□□ -1.1
FNDC3B-210ENST00000483344 KANK4Q5T7N3 995 aaPredicted RBP8.21□□□□□ -1.1
FNDC3B-210ENST00000483344 CCDC125Q86Z20 511 aa8.21□□□□□ -1.1
FNDC3B-210ENST00000483344 DOLKQ9UPQ8 538 aa8.21□□□□□ -1.1
FNDC3B-210ENST00000483344 GFRA3O60609 400 aa8.2□□□□□ -1.1
FNDC3B-210ENST00000483344 ARID5BQ14865 1188 aa8.2□□□□□ -1.1
FNDC3B-210ENST00000483344 EML3Q32P44 896 aa8.2□□□□□ -1.1
FNDC3B-210ENST00000483344 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
FNDC3B-210ENST00000483344 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
FNDC3B-210ENST00000483344 TRAF7Q6Q0C0 670 aa8.2□□□□□ -1.1
FNDC3B-210ENST00000483344 RETREG2Q8NC44 543 aa8.2□□□□□ -1.1
FNDC3B-210ENST00000483344 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
FNDC3B-210ENST00000483344 WNT7AO00755 349 aa8.19□□□□□ -1.1
FNDC3B-210ENST00000483344 ATG7O95352 703 aa8.19□□□□□ -1.1
FNDC3B-210ENST00000483344 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
FNDC3B-210ENST00000483344 MKRN1Q9UHC7 482 aaKnown RBP8.19□□□□□ -1.1
FNDC3B-210ENST00000483344 ATP5J2-PTCD1G3V325 749 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 SIAH2O43255 324 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 CSB-PGBD3P0DP91 1061 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 RAB15P59190 212 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 PDE4CQ08493 712 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 MPNDQ8N594 471 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 MRGPRX2Q96LB1 330 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 PCDHB11Q9Y5F2 797 aa8.18□□□□□ -1.1
FNDC3B-210ENST00000483344 INTS6LQ5JSJ4 861 aaKnown RBP8.17□□□□□ -1.1
FNDC3B-210ENST00000483344 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
FNDC3B-210ENST00000483344 ZNF598Q86UK7 904 aaKnown RBP8.17□□□□□ -1.1
FNDC3B-210ENST00000483344 SIRT1Q96EB6 747 aa8.17□□□□□ -1.1
FNDC3B-210ENST00000483344 NOD1Q9Y239 953 aa8.17□□□□□ -1.1
FNDC3B-210ENST00000483344 TLL2Q9Y6L7 1015 aa8.17□□□□□ -1.1
FNDC3B-210ENST00000483344 V9GY48 417 aaPredicted RBP8.17□□□□□ -1.1
FNDC3B-210ENST00000483344 RASA1P20936 1047 aa8.16□□□□□ -1.1
FNDC3B-210ENST00000483344 FSHRP23945 695 aa8.16□□□□□ -1.1
FNDC3B-210ENST00000483344 USP4Q13107 963 aa8.16□□□□□ -1.1
FNDC3B-210ENST00000483344 LARP1Q6PKG0 1096 aaKnown RBP8.16□□□□□ -1.1
FNDC3B-210ENST00000483344 TRIM50Q86XT4 487 aa8.16□□□□□ -1.1
FNDC3B-210ENST00000483344 FAM196BA6NMK8 535 aa8.15□□□□□ -1.1
FNDC3B-210ENST00000483344 ADH1CP00326 375 aa8.15□□□□□ -1.1
FNDC3B-210ENST00000483344 GRM5P41594 1212 aa8.15□□□□□ -1.1
FNDC3B-210ENST00000483344 DHX9Q08211 1270 aaKnown RBP8.15□□□□□ -1.1
FNDC3B-210ENST00000483344 ELOAQ14241 798 aaKnown RBP8.15□□□□□ -1.1
FNDC3B-210ENST00000483344 TRIM52Q96A61 297 aa8.15□□□□□ -1.1
FNDC3B-210ENST00000483344 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
FNDC3B-210ENST00000483344 CDCA7Q9BWT1 371 aaPredicted RBP8.15□□□□□ -1.1
FNDC3B-210ENST00000483344 ERVH48-1M5A8F1 160 aa8.14□□□□□ -1.11
FNDC3B-210ENST00000483344 ATP1A2P50993 1020 aa8.14□□□□□ -1.11
FNDC3B-210ENST00000483344 FOXC1Q12948 553 aa8.14□□□□□ -1.11
FNDC3B-210ENST00000483344 NR5A1Q13285 461 aa8.14□□□□□ -1.11
FNDC3B-210ENST00000483344 LAPTM4AQ15012 233 aa8.14□□□□□ -1.11
FNDC3B-210ENST00000483344 CRTC2Q53ET0 693 aaPredicted RBP8.14□□□□□ -1.11
FNDC3B-210ENST00000483344 USTQ9Y2C2 406 aa8.14□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L15C9J2P7 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L10C9JJH3 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L13C9JLJ4 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L12C9JPN9 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L11C9JVI0 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L21D6R901 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L18D6R9N7 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L22D6RA61 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L17D6RBQ6 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L19D6RCP7 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L20D6RJB6 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 MYCP01106 439 aaPredicted RBP8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 USP17L24Q0WX57 530 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 PTK7Q13308 1070 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 OGFOD1Q8N543 542 aa8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 NOVA2Q9UNW9 492 aaKnown RBP8.13□□□□□ -1.11
FNDC3B-210ENST00000483344 NRG2O14511 850 aaPredicted RBP8.12□□□□□ -1.11
FNDC3B-210ENST00000483344 GTF2IP78347 998 aa8.12□□□□□ -1.11
FNDC3B-210ENST00000483344 CCDC116Q8IYX3 515 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms