RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ALDH1L2Q3SY69 923 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.56■□□□□ 0.08
VPS52-218ENST00000482399 ZNF428Q96B54 188 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 PLEKHF1Q96S99 279 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 REC8O95072 547 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 SULT6B1Q6IMI4 303 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 MRPL50Q8N5N7 158 aaKnown RBP15.56■□□□□ 0.08
VPS52-218ENST00000482399 FANCAO15360 1455 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 KDM5AP29375 1690 aaKnown RBP15.56■□□□□ 0.08
VPS52-218ENST00000482399 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 COG3Q96JB2 828 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 ADGRL1O94910 1474 aa15.56■□□□□ 0.08
VPS52-218ENST00000482399 A0A0U1RQG5 324 aaPredicted RBP15.55■□□□□ 0.08
VPS52-218ENST00000482399 MAP4K4O95819 1239 aaPredicted RBP15.55■□□□□ 0.08
VPS52-218ENST00000482399 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 GSPT1P15170 499 aaKnown RBP15.55■□□□□ 0.08
VPS52-218ENST00000482399 RBSNQ9H1K0 784 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 SDSP20132 328 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 SIRT2Q8IXJ6 389 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 NCKAP5LQ9HCH0 1330 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 PREX2Q70Z35 1606 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 MYO5CQ9NQX4 1742 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 ABCC11Q96J66 1382 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 PLEKHM2Q8IWE5 1019 aa15.55■□□□□ 0.08
VPS52-218ENST00000482399 UQCRHLA0A096LP55 91 aa15.54■□□□□ 0.08
VPS52-218ENST00000482399 UQCRHP07919 91 aa15.54■□□□□ 0.08
VPS52-218ENST00000482399 TPM2P07951 284 aa15.54■□□□□ 0.08
VPS52-218ENST00000482399 FBXO31Q5XUX0 539 aaPredicted RBP15.54■□□□□ 0.08
VPS52-218ENST00000482399 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
VPS52-218ENST00000482399 MEIS3Q99687 375 aa15.54■□□□□ 0.08
VPS52-218ENST00000482399 POLKQ9UBT6 870 aa15.54■□□□□ 0.08
VPS52-218ENST00000482399 MCCP23508 829 aa15.53■□□□□ 0.08
VPS52-218ENST00000482399 ZNF518AQ6AHZ1 1483 aa15.53■□□□□ 0.08
VPS52-218ENST00000482399 MADDQ8WXG6 1647 aa15.53■□□□□ 0.08
VPS52-218ENST00000482399 KIF2CQ99661 725 aa15.53■□□□□ 0.08
VPS52-218ENST00000482399 HMMRO75330 724 aa15.53■□□□□ 0.08
VPS52-218ENST00000482399 LTV1Q96GA3 475 aaPredicted RBP15.53■□□□□ 0.08
VPS52-218ENST00000482399 ZNF830Q96NB3 372 aaPredicted RBP15.53■□□□□ 0.08
VPS52-218ENST00000482399 PRDM10Q9NQV6 1147 aa15.53■□□□□ 0.08
VPS52-218ENST00000482399 IQGAP3Q86VI3 1631 aa15.52■□□□□ 0.08
VPS52-218ENST00000482399 LMOD3Q0VAK6 560 aa15.52■□□□□ 0.08
VPS52-218ENST00000482399 TXNDC2Q86VQ3 553 aa15.52■□□□□ 0.08
VPS52-218ENST00000482399 ESF1Q9H501 851 aaKnown RBP15.52■□□□□ 0.08
VPS52-218ENST00000482399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.52■□□□□ 0.07
VPS52-218ENST00000482399 TTC22Q5TAA0 569 aa15.52■□□□□ 0.07
VPS52-218ENST00000482399 AEBP1Q8IUX7 1158 aa15.52■□□□□ 0.07
VPS52-218ENST00000482399 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
VPS52-218ENST00000482399 CLTCL1P53675 1640 aa15.51■□□□□ 0.07
VPS52-218ENST00000482399 CD109Q6YHK3 1445 aa15.51■□□□□ 0.07
VPS52-218ENST00000482399 PPIP5K1Q6PFW1 1433 aa15.51■□□□□ 0.07
VPS52-218ENST00000482399 OS9Q13438 667 aaPredicted RBP15.51■□□□□ 0.07
VPS52-218ENST00000482399 FKBP5Q13451 457 aaPredicted RBP15.51■□□□□ 0.07
VPS52-218ENST00000482399 IL1RAPL2Q9NP60 686 aa15.51■□□□□ 0.07
VPS52-218ENST00000482399 UNC13BO14795 1591 aa15.51■□□□□ 0.07
VPS52-218ENST00000482399 ERC2O15083 957 aa15.5■□□□□ 0.07
VPS52-218ENST00000482399 KIAA2012Q0VF49 1180 aa15.5■□□□□ 0.07
VPS52-218ENST00000482399 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
VPS52-218ENST00000482399 IL16Q14005 1332 aa15.49■□□□□ 0.07
VPS52-218ENST00000482399 DDX54Q8TDD1 881 aaKnown RBP15.49■□□□□ 0.07
VPS52-218ENST00000482399 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
VPS52-218ENST00000482399 FAM177BA6PVY3 158 aa15.49■□□□□ 0.07
VPS52-218ENST00000482399 USP26Q9BXU7 913 aa15.49■□□□□ 0.07
VPS52-218ENST00000482399 TAOK2Q9UL54 1235 aa15.49■□□□□ 0.07
VPS52-218ENST00000482399 TRPM2O94759 1503 aa15.48■□□□□ 0.07
VPS52-218ENST00000482399 TSPYL4Q9UJ04 414 aa15.48■□□□□ 0.07
VPS52-218ENST00000482399 KCNJ4P48050 445 aa15.48■□□□□ 0.07
VPS52-218ENST00000482399 LMBRD1Q9NUN5 540 aa15.48■□□□□ 0.07
VPS52-218ENST00000482399 IFT57Q9NWB7 429 aa15.48■□□□□ 0.07
VPS52-218ENST00000482399 FIBPO43427 364 aa15.47■□□□□ 0.07
VPS52-218ENST00000482399 CFAP44Q96MT7 982 aa15.47■□□□□ 0.07
VPS52-218ENST00000482399 NSFL1CQ9UNZ2 370 aaKnown RBP15.47■□□□□ 0.07
VPS52-218ENST00000482399 TSC1Q92574 1164 aa15.46■□□□□ 0.07
VPS52-218ENST00000482399 SYAP1Q96A49 352 aaPredicted RBP15.46■□□□□ 0.07
VPS52-218ENST00000482399 TMEM63CQ9P1W3 806 aa15.46■□□□□ 0.07
VPS52-218ENST00000482399 TMX3Q96JJ7 454 aa15.46■□□□□ 0.06
VPS52-218ENST00000482399 PDCL3Q9H2J4 239 aa15.46■□□□□ 0.06
VPS52-218ENST00000482399 NUTM2GQ5VZR2 741 aa15.45■□□□□ 0.06
VPS52-218ENST00000482399 DCTPP1Q9H773 170 aa15.45■□□□□ 0.06
VPS52-218ENST00000482399 CWC22Q9HCG8 908 aaKnown RBP15.45■□□□□ 0.06
VPS52-218ENST00000482399 RPGRIP1LQ68CZ1 1315 aa15.45■□□□□ 0.06
VPS52-218ENST00000482399 EIF2S2P20042 333 aaKnown RBP15.45■□□□□ 0.06
VPS52-218ENST00000482399 USP25Q9UHP3 1055 aa15.45■□□□□ 0.06
VPS52-218ENST00000482399 OFD1O75665 1012 aa15.45■□□□□ 0.06
VPS52-218ENST00000482399 GPT2Q8TD30 523 aa15.45■□□□□ 0.06
VPS52-218ENST00000482399 TSPY26PQ9H489 355 aa15.45■□□□□ 0.06
VPS52-218ENST00000482399 NSD2O96028 1365 aa15.44■□□□□ 0.06
VPS52-218ENST00000482399 C17orf53Q8N3J3 647 aaPredicted RBP15.44■□□□□ 0.06
VPS52-218ENST00000482399 SPC24Q8NBT2 197 aa15.44■□□□□ 0.06
VPS52-218ENST00000482399 NUTM1Q86Y26 1132 aa15.44■□□□□ 0.06
VPS52-218ENST00000482399 DRC7Q8IY82 874 aa15.44■□□□□ 0.06
VPS52-218ENST00000482399 LAMC1P11047 1609 aa15.44■□□□□ 0.06
VPS52-218ENST00000482399 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
VPS52-218ENST00000482399 CCDC39Q9UFE4 941 aa15.43■□□□□ 0.06
VPS52-218ENST00000482399 CEP85Q6P2H3 762 aa15.43■□□□□ 0.06
VPS52-218ENST00000482399 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
VPS52-218ENST00000482399 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
VPS52-218ENST00000482399 VPS37CA5D8V6 355 aaPredicted RBP15.43■□□□□ 0.06
VPS52-218ENST00000482399 SBNO2Q9Y2G9 1366 aa15.42■□□□□ 0.06
VPS52-218ENST00000482399 ANKRD44Q8N8A2 993 aa15.42■□□□□ 0.06
VPS52-218ENST00000482399 FOXO3O43524 673 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms