RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
SMPD4-218ENST00000482171 MRE11P49959 708 aa13.81□□□□□ -0.2
SMPD4-218ENST00000482171 ADGBQ8N7X0 1667 aa13.81□□□□□ -0.2
SMPD4-218ENST00000482171 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
SMPD4-218ENST00000482171 GNAT3A8MTJ3 354 aa13.81□□□□□ -0.2
SMPD4-218ENST00000482171 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
SMPD4-218ENST00000482171 HSP90B1P14625 803 aaKnown RBP13.81□□□□□ -0.2
SMPD4-218ENST00000482171 UGGT1Q9NYU2 1555 aa13.81□□□□□ -0.2
SMPD4-218ENST00000482171 REC8O95072 547 aa13.8□□□□□ -0.2
SMPD4-218ENST00000482171 MPRIPQ6WCQ1 1025 aa13.8□□□□□ -0.2
SMPD4-218ENST00000482171 EIF2AK4Q9P2K8 1649 aaKnown RBP13.8□□□□□ -0.2
SMPD4-218ENST00000482171 NSD2O96028 1365 aa13.8□□□□□ -0.2
SMPD4-218ENST00000482171 LRPPRCP42704 1394 aaKnown RBP13.8□□□□□ -0.2
SMPD4-218ENST00000482171 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
SMPD4-218ENST00000482171 GNAI2P04899 355 aa13.8□□□□□ -0.2
SMPD4-218ENST00000482171 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
SMPD4-218ENST00000482171 SKOR2Q2VWA4 1001 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-218ENST00000482171 YTHDC2Q9H6S0 1430 aaKnown RBP13.79□□□□□ -0.2
SMPD4-218ENST00000482171 KCNA6P17658 529 aa13.79□□□□□ -0.2
SMPD4-218ENST00000482171 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
SMPD4-218ENST00000482171 IFT57Q9NWB7 429 aa13.79□□□□□ -0.2
SMPD4-218ENST00000482171 ATP10AO60312 1499 aa13.79□□□□□ -0.2
SMPD4-218ENST00000482171 DRC7Q8IY82 874 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 PHACTR3Q96KR7 559 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 NEUROD6Q96NK8 337 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 MBIPQ9NS73 344 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 DMRT2Q9Y5R5 561 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
SMPD4-218ENST00000482171 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 NUTM2BA6NNL0 878 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-218ENST00000482171 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-218ENST00000482171 IGHDP01880 384 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-218ENST00000482171 EXOC6BQ9Y2D4 811 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 CDC45O75419 566 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 RNF123Q5XPI4 1314 aa13.78□□□□□ -0.2
SMPD4-218ENST00000482171 CHD1LQ86WJ1 897 aa13.77□□□□□ -0.2
SMPD4-218ENST00000482171 SRCIN1Q9C0H9 1055 aa13.77□□□□□ -0.2
SMPD4-218ENST00000482171 IL1RAPL2Q9NP60 686 aa13.77□□□□□ -0.2
SMPD4-218ENST00000482171 GCC1Q96CN9 775 aa13.77□□□□□ -0.21
SMPD4-218ENST00000482171 SIL1Q9H173 461 aa13.77□□□□□ -0.21
SMPD4-218ENST00000482171 CABP4P57796 275 aa13.77□□□□□ -0.21
SMPD4-218ENST00000482171 ABCC11Q96J66 1382 aa13.77□□□□□ -0.21
SMPD4-218ENST00000482171 CHRNA2Q15822 529 aa13.76□□□□□ -0.21
SMPD4-218ENST00000482171 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
SMPD4-218ENST00000482171 ZCCHC11Q5TAX3 1644 aaKnown RBP13.76□□□□□ -0.21
SMPD4-218ENST00000482171 PLA2R1Q13018 1463 aa13.76□□□□□ -0.21
SMPD4-218ENST00000482171 POLR3AO14802 1390 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-218ENST00000482171 CCT4P50991 539 aaKnown RBP13.76□□□□□ -0.21
SMPD4-218ENST00000482171 HSPA2P54652 639 aa13.76□□□□□ -0.21
SMPD4-218ENST00000482171 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
SMPD4-218ENST00000482171 KRT28Q7Z3Y7 464 aa13.76□□□□□ -0.21
SMPD4-218ENST00000482171 CLASRPQ8N2M8 674 aaKnown RBP13.76□□□□□ -0.21
SMPD4-218ENST00000482171 MAP4K4O95819 1239 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-218ENST00000482171 ANXA1P04083 346 aa13.75□□□□□ -0.21
SMPD4-218ENST00000482171 KRT24Q2M2I5 525 aa13.75□□□□□ -0.21
SMPD4-218ENST00000482171 SMARCA5O60264 1052 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-218ENST00000482171 PTCD1O75127 700 aaKnown RBP13.75□□□□□ -0.21
SMPD4-218ENST00000482171 CDC42BPAQ5VT25 1732 aa13.75□□□□□ -0.21
SMPD4-218ENST00000482171 R3HCC1Q9Y3T6 440 aaKnown RBP13.75□□□□□ -0.21
SMPD4-218ENST00000482171 ABCC1P33527 1531 aa13.74□□□□□ -0.21
SMPD4-218ENST00000482171 PREX2Q70Z35 1606 aa13.74□□□□□ -0.21
SMPD4-218ENST00000482171 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
SMPD4-218ENST00000482171 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-218ENST00000482171 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
SMPD4-218ENST00000482171 RLBP1P12271 317 aa13.74□□□□□ -0.21
SMPD4-218ENST00000482171 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-218ENST00000482171 UBE2Q2Q8WVN8 375 aa13.74□□□□□ -0.21
SMPD4-218ENST00000482171 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
SMPD4-218ENST00000482171 KAT6BQ8WYB5 2073 aa13.74□□□□□ -0.21
SMPD4-218ENST00000482171 RBM10P98175 930 aaKnown RBP13.73□□□□□ -0.21
SMPD4-218ENST00000482171 HSP90AB4PQ58FF6 505 aa13.73□□□□□ -0.21
SMPD4-218ENST00000482171 SPG7Q9UQ90 795 aa13.73□□□□□ -0.21
SMPD4-218ENST00000482171 NASPP49321 788 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-218ENST00000482171 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
SMPD4-218ENST00000482171 ALDH1L2Q3SY69 923 aa13.73□□□□□ -0.21
SMPD4-218ENST00000482171 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
SMPD4-218ENST00000482171 C8orf58Q8NAV2 365 aa13.73□□□□□ -0.21
SMPD4-218ENST00000482171 RUFY2Q8WXA3 655 aa13.73□□□□□ -0.21
SMPD4-218ENST00000482171 LTKP29376 864 aa13.72□□□□□ -0.21
SMPD4-218ENST00000482171 PIK3C2GO75747 1445 aa13.72□□□□□ -0.21
SMPD4-218ENST00000482171 MCM4P33991 863 aa13.72□□□□□ -0.21
SMPD4-218ENST00000482171 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-218ENST00000482171 ESPNB1AK53 854 aa13.71□□□□□ -0.21
SMPD4-218ENST00000482171 TULP1O00294 542 aaPredicted RBP13.71□□□□□ -0.21
SMPD4-218ENST00000482171 CABLES1Q8TDN4 633 aa13.71□□□□□ -0.21
SMPD4-218ENST00000482171 NEO1Q92859 1461 aa13.71□□□□□ -0.21
SMPD4-218ENST00000482171 PTPRTO14522 1441 aa13.71□□□□□ -0.21
SMPD4-218ENST00000482171 ZKSCAN1P17029 563 aaPredicted RBP13.71□□□□□ -0.22
SMPD4-218ENST00000482171 LRRC59Q96AG4 307 aaKnown RBP13.71□□□□□ -0.22
SMPD4-218ENST00000482171 CCDC85AQ96PX6 553 aaPredicted RBP13.71□□□□□ -0.22
SMPD4-218ENST00000482171 LRRCC1Q9C099 1032 aa13.71□□□□□ -0.22
SMPD4-218ENST00000482171 ERC2O15083 957 aa13.7□□□□□ -0.22
SMPD4-218ENST00000482171 MCTP1Q6DN14 999 aa13.7□□□□□ -0.22
SMPD4-218ENST00000482171 PUS7Q96PZ0 661 aaKnown RBP13.7□□□□□ -0.22
SMPD4-218ENST00000482171 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
SMPD4-218ENST00000482171 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
SMPD4-218ENST00000482171 APPP05067 770 aa13.69□□□□□ -0.22
SMPD4-218ENST00000482171 NEK4P51957 841 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms