RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 TMEM132EQ6IEE7 984 aa10.83□□□□□ -0.68
SNRNP200-203ENST00000480242 RGPD3A6NKT7 1758 aaPredicted RBP10.83□□□□□ -0.68
SNRNP200-203ENST00000480242 RGPD4Q7Z3J3 1758 aa10.83□□□□□ -0.68
SNRNP200-203ENST00000480242 USP6P35125 1406 aa10.83□□□□□ -0.68
SNRNP200-203ENST00000480242 RBM10P98175 930 aaKnown RBP10.83□□□□□ -0.68
SNRNP200-203ENST00000480242 BECN1Q14457 450 aa10.83□□□□□ -0.68
SNRNP200-203ENST00000480242 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
SNRNP200-203ENST00000480242 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
SNRNP200-203ENST00000480242 MYBBP1AQ9BQG0 1328 aaKnown RBP10.82□□□□□ -0.68
SNRNP200-203ENST00000480242 MRC1P22897 1456 aa10.82□□□□□ -0.68
SNRNP200-203ENST00000480242 PLEKHH1Q9ULM0 1364 aa10.82□□□□□ -0.68
SNRNP200-203ENST00000480242 KDM2BQ8NHM5 1336 aa10.82□□□□□ -0.68
SNRNP200-203ENST00000480242 ROBO1Q9Y6N7 1651 aa10.82□□□□□ -0.68
SNRNP200-203ENST00000480242 LAMB4A4D0S4 1761 aa10.81□□□□□ -0.68
SNRNP200-203ENST00000480242 SCN11AQ9UI33 1791 aa10.81□□□□□ -0.68
SNRNP200-203ENST00000480242 NEUROD2Q15784 382 aa10.81□□□□□ -0.68
SNRNP200-203ENST00000480242 RGPD5Q99666 1765 aa10.81□□□□□ -0.68
SNRNP200-203ENST00000480242 PLEKHG3A1L390 1219 aa10.81□□□□□ -0.68
SNRNP200-203ENST00000480242 CENPJQ9HC77 1338 aaPredicted RBP10.8□□□□□ -0.68
SNRNP200-203ENST00000480242 NUTM2FA1L443 756 aa10.8□□□□□ -0.68
SNRNP200-203ENST00000480242 RGPD2P0DJD1 1756 aa10.8□□□□□ -0.68
SNRNP200-203ENST00000480242 CFAP70Q5T0N1 1121 aa10.8□□□□□ -0.68
SNRNP200-203ENST00000480242 ESPNB1AK53 854 aa10.8□□□□□ -0.68
SNRNP200-203ENST00000480242 MYH16Q9H6N6 1097 aa10.79□□□□□ -0.68
SNRNP200-203ENST00000480242 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
SNRNP200-203ENST00000480242 SEC24BO95487 1268 aa10.79□□□□□ -0.68
SNRNP200-203ENST00000480242 THEMISQ8N1K5 641 aaPredicted RBP10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 TRIM44Q96DX7 344 aaPredicted RBP10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 KNSTRNQ9Y448 316 aa10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 A0A1W2PP64 1363 aa10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 THSD7AQ9UPZ6 1657 aa10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 OVOS2A0A0G2JMS6 1433 aa10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 RALBP1Q15311 655 aa10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 ARID3AQ99856 593 aa10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 RTL1A6NKG5 1358 aa10.78□□□□□ -0.68
SNRNP200-203ENST00000480242 PDCL3Q9H2J4 239 aa10.77□□□□□ -0.68
SNRNP200-203ENST00000480242 PANK3Q9H999 370 aa10.77□□□□□ -0.68
SNRNP200-203ENST00000480242 ERBB4Q15303 1308 aa10.77□□□□□ -0.69
SNRNP200-203ENST00000480242 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
SNRNP200-203ENST00000480242 PPIP5K1Q6PFW1 1433 aa10.77□□□□□ -0.69
SNRNP200-203ENST00000480242 C1orf167Q5SNV9 1468 aa10.77□□□□□ -0.69
SNRNP200-203ENST00000480242 SBNO1A3KN83 1393 aa10.77□□□□□ -0.69
SNRNP200-203ENST00000480242 TMF1P82094 1093 aa10.77□□□□□ -0.69
SNRNP200-203ENST00000480242 COL24A1Q17RW2 1714 aa10.76□□□□□ -0.69
SNRNP200-203ENST00000480242 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
SNRNP200-203ENST00000480242 NLRP13Q86W25 1043 aa10.76□□□□□ -0.69
SNRNP200-203ENST00000480242 SOX12O15370 315 aa10.76□□□□□ -0.69
SNRNP200-203ENST00000480242 USP19O94966 1318 aa10.76□□□□□ -0.69
SNRNP200-203ENST00000480242 PHF23Q9BUL5 403 aaPredicted RBP10.75□□□□□ -0.69
SNRNP200-203ENST00000480242 MRE11P49959 708 aa10.75□□□□□ -0.69
SNRNP200-203ENST00000480242 CDCA8Q53HL2 280 aa10.75□□□□□ -0.69
SNRNP200-203ENST00000480242 MCM4P33991 863 aa10.74□□□□□ -0.69
SNRNP200-203ENST00000480242 KIAA1211Q6ZU35 1233 aa10.74□□□□□ -0.69
SNRNP200-203ENST00000480242 TRAK2O60296 914 aa10.74□□□□□ -0.69
SNRNP200-203ENST00000480242 TPM2P07951 284 aa10.74□□□□□ -0.69
SNRNP200-203ENST00000480242 TOGARAM1Q9Y4F4 1720 aa10.74□□□□□ -0.69
SNRNP200-203ENST00000480242 GRPEL1Q9HAV7 217 aa10.74□□□□□ -0.69
SNRNP200-203ENST00000480242 SRPK2P78362 688 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-203ENST00000480242 AAMPQ13685 434 aa10.73□□□□□ -0.69
SNRNP200-203ENST00000480242 PRR36Q9H6K5 1346 aa10.73□□□□□ -0.69
SNRNP200-203ENST00000480242 CALD1Q05682 793 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-203ENST00000480242 ANTXR1Q9H6X2 564 aa10.73□□□□□ -0.69
SNRNP200-203ENST00000480242 CACNA1FO60840 1977 aa10.73□□□□□ -0.69
SNRNP200-203ENST00000480242 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
SNRNP200-203ENST00000480242 ZNF521Q96K83 1311 aa10.73□□□□□ -0.69
SNRNP200-203ENST00000480242 KCNA6P17658 529 aa10.72□□□□□ -0.69
SNRNP200-203ENST00000480242 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
SNRNP200-203ENST00000480242 IBTKQ9P2D0 1353 aaPredicted RBP10.72□□□□□ -0.69
SNRNP200-203ENST00000480242 PRDM4Q9UKN5 801 aa10.72□□□□□ -0.69
SNRNP200-203ENST00000480242 TBC1D2Q9BYX2 928 aa10.72□□□□□ -0.69
SNRNP200-203ENST00000480242 FAM13BQ9NYF5 915 aa10.72□□□□□ -0.69
SNRNP200-203ENST00000480242 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.69
SNRNP200-203ENST00000480242 CARD14Q9BXL6 1004 aa10.71□□□□□ -0.69
SNRNP200-203ENST00000480242 UPF2Q9HAU5 1272 aaKnown RBP10.71□□□□□ -0.69
SNRNP200-203ENST00000480242 C5P01031 1676 aa10.71□□□□□ -0.7
SNRNP200-203ENST00000480242 KDRP35968 1356 aa10.71□□□□□ -0.7
SNRNP200-203ENST00000480242 CCDC146Q8IYE0 955 aa10.7□□□□□ -0.7
SNRNP200-203ENST00000480242 EVC2Q86UK5 1308 aa10.7□□□□□ -0.7
SNRNP200-203ENST00000480242 IGHDP01880 384 aa10.7□□□□□ -0.7
SNRNP200-203ENST00000480242 CPDO75976 1380 aa10.69□□□□□ -0.7
SNRNP200-203ENST00000480242 MINK1Q8N4C8 1332 aaPredicted RBP10.69□□□□□ -0.7
SNRNP200-203ENST00000480242 NSD3Q9BZ95 1437 aa10.69□□□□□ -0.7
SNRNP200-203ENST00000480242 AEBP2Q6ZN18 517 aaPredicted RBP10.69□□□□□ -0.7
SNRNP200-203ENST00000480242 TUBGCP6Q96RT7 1819 aa10.69□□□□□ -0.7
SNRNP200-203ENST00000480242 TTC21AQ8NDW8 1320 aa10.68□□□□□ -0.7
SNRNP200-203ENST00000480242 COL5A3P25940 1745 aaPredicted RBP10.68□□□□□ -0.7
SNRNP200-203ENST00000480242 WASLO00401 505 aaPredicted RBP10.68□□□□□ -0.7
SNRNP200-203ENST00000480242 ZBTB7CA1YPR0 619 aa10.67□□□□□ -0.7
SNRNP200-203ENST00000480242 FGD1P98174 961 aa10.67□□□□□ -0.7
SNRNP200-203ENST00000480242 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
SNRNP200-203ENST00000480242 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
SNRNP200-203ENST00000480242 CEBPAP49715 358 aaPredicted RBP10.67□□□□□ -0.7
SNRNP200-203ENST00000480242 C14orf37Q86TY3 774 aa10.67□□□□□ -0.7
SNRNP200-203ENST00000480242 PRDM10Q9NQV6 1147 aa10.67□□□□□ -0.7
SNRNP200-203ENST00000480242 ADAMTS8Q9UP79 889 aa10.66□□□□□ -0.7
SNRNP200-203ENST00000480242 DUSP27Q5VZP5 1158 aa10.66□□□□□ -0.7
SNRNP200-203ENST00000480242 BCAR3O75815 825 aa10.65□□□□□ -0.7
SNRNP200-203ENST00000480242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNRNP200-203ENST00000480242 SLC12A5Q9H2X9 1139 aa10.65□□□□□ -0.7
SNRNP200-203ENST00000480242 CHMP5Q9NZZ3 219 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms