RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 STK32BQ9NY57 414 aa22.75■■□□□ 1.23
HDLBP-238ENST00000479894 ATF5Q9Y2D1 282 aaPredicted RBP22.75■■□□□ 1.23
HDLBP-238ENST00000479894 SGIP1Q9BQI5 828 aa22.74■■□□□ 1.23
HDLBP-238ENST00000479894 AATKQ6ZMQ8 1374 aa22.74■■□□□ 1.23
HDLBP-238ENST00000479894 MAP3K5Q99683 1374 aa22.74■■□□□ 1.23
HDLBP-238ENST00000479894 CDK19Q9BWU1 502 aa22.73■■□□□ 1.23
HDLBP-238ENST00000479894 SLC15A2Q16348 729 aa22.72■■□□□ 1.23
HDLBP-238ENST00000479894 BRD4O60885 1362 aaPredicted RBP22.72■■□□□ 1.23
HDLBP-238ENST00000479894 PTF1AQ7RTS3 328 aa22.71■■□□□ 1.23
HDLBP-238ENST00000479894 COL18A1P39060 1754 aa22.71■■□□□ 1.23
HDLBP-238ENST00000479894 TXNRD1Q16881 649 aa22.7■■□□□ 1.22
HDLBP-238ENST00000479894 CDCA7Q9BWT1 371 aaPredicted RBP22.7■■□□□ 1.22
HDLBP-238ENST00000479894 MARCH10Q8NA82 808 aaPredicted RBP22.67■■□□□ 1.22
HDLBP-238ENST00000479894 SLIT3O75094 1523 aa22.67■■□□□ 1.22
HDLBP-238ENST00000479894 GIGYF1O75420 1035 aaPredicted RBP22.66■■□□□ 1.22
HDLBP-238ENST00000479894 TOM1L2Q6ZVM7 507 aa22.66■■□□□ 1.22
HDLBP-238ENST00000479894 DCAF11Q8TEB1 546 aa22.66■■□□□ 1.22
HDLBP-238ENST00000479894 ARXQ96QS3 562 aa22.66■■□□□ 1.22
HDLBP-238ENST00000479894 KDM2AQ9Y2K7 1162 aa22.66■■□□□ 1.22
HDLBP-238ENST00000479894 CEP350Q5VT06 3117 aa22.65■■□□□ 1.22
HDLBP-238ENST00000479894 WDR17Q8IZU2 1322 aa22.64■■□□□ 1.22
HDLBP-238ENST00000479894 NHSQ6T4R5 1651 aa22.63■■□□□ 1.21
HDLBP-238ENST00000479894 PAPPAQ13219 1627 aa22.63■■□□□ 1.21
HDLBP-238ENST00000479894 RGPD5Q99666 1765 aa22.63■■□□□ 1.21
HDLBP-238ENST00000479894 KIAA1210Q9ULL0 1709 aa22.61■■□□□ 1.21
HDLBP-238ENST00000479894 COL24A1Q17RW2 1714 aa22.6■■□□□ 1.21
HDLBP-238ENST00000479894 QSER1Q2KHR3 1735 aa22.6■■□□□ 1.21
HDLBP-238ENST00000479894 PPIP5K1Q6PFW1 1433 aa22.6■■□□□ 1.21
HDLBP-238ENST00000479894 GPR162Q16538 588 aa22.59■■□□□ 1.21
HDLBP-238ENST00000479894 KAT6BQ8WYB5 2073 aa22.58■■□□□ 1.21
HDLBP-238ENST00000479894 SHANK3Q9BYB0 1731 aa22.58■■□□□ 1.21
HDLBP-238ENST00000479894 ZBTB7CA1YPR0 619 aa22.58■■□□□ 1.21
HDLBP-238ENST00000479894 NLRP6P59044 892 aa22.58■■□□□ 1.21
HDLBP-238ENST00000479894 CARD10Q9BWT7 1032 aa22.58■■□□□ 1.21
HDLBP-238ENST00000479894 EXOC5O00471 708 aa22.57■■□□□ 1.2
HDLBP-238ENST00000479894 USP6P35125 1406 aa22.57■■□□□ 1.2
HDLBP-238ENST00000479894 PIK3C2AO00443 1686 aa22.56■■□□□ 1.2
HDLBP-238ENST00000479894 AXIN2Q9Y2T1 843 aa22.56■■□□□ 1.2
HDLBP-238ENST00000479894 TRPM1Q7Z4N2 1603 aa22.56■■□□□ 1.2
HDLBP-238ENST00000479894 CPSF1Q10570 1443 aaKnown RBP22.56■■□□□ 1.2
HDLBP-238ENST00000479894 BTAF1O14981 1849 aa22.55■■□□□ 1.2
HDLBP-238ENST00000479894 TNS2Q63HR2 1409 aa22.55■■□□□ 1.2
HDLBP-238ENST00000479894 QRICH2Q9H0J4 1663 aa22.55■■□□□ 1.2
HDLBP-238ENST00000479894 GOLGB1Q14789 3259 aaKnown RBP22.53■■□□□ 1.2
HDLBP-238ENST00000479894 CCDC7Q96M83 1385 aa22.53■■□□□ 1.2
HDLBP-238ENST00000479894 SLC16A10Q8TF71 515 aa22.53■■□□□ 1.2
HDLBP-238ENST00000479894 SRPK2P78362 688 aaKnown RBP22.52■■□□□ 1.2
HDLBP-238ENST00000479894 ABCC6O95255 1503 aa22.52■■□□□ 1.19
HDLBP-238ENST00000479894 ARHGEF25Q86VW2 580 aa22.51■■□□□ 1.19
HDLBP-238ENST00000479894 KCNH5Q8NCM2 988 aa22.5■■□□□ 1.19
HDLBP-238ENST00000479894 CSB-PGBD3P0DP91 1061 aa22.49■■□□□ 1.19
HDLBP-238ENST00000479894 POLD1P28340 1107 aa22.47■■□□□ 1.19
HDLBP-238ENST00000479894 ZNF827Q17R98 1081 aa22.46■■□□□ 1.19
HDLBP-238ENST00000479894 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
HDLBP-238ENST00000479894 CABP1Q9NZU7 370 aa22.46■■□□□ 1.19
HDLBP-238ENST00000479894 TUBGCP6Q96RT7 1819 aa22.45■■□□□ 1.19
HDLBP-238ENST00000479894 RAB3GAP2Q9H2M9 1393 aa22.45■■□□□ 1.18
HDLBP-238ENST00000479894 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
HDLBP-238ENST00000479894 CENPJQ9HC77 1338 aaPredicted RBP22.44■■□□□ 1.18
HDLBP-238ENST00000479894 PELP1Q8IZL8 1130 aaKnown RBP22.43■■□□□ 1.18
HDLBP-238ENST00000479894 AKT1S1Q96B36 256 aa22.43■■□□□ 1.18
HDLBP-238ENST00000479894 ACSBG1Q96GR2 724 aa22.43■■□□□ 1.18
HDLBP-238ENST00000479894 PCGF6Q9BYE7 350 aa22.43■■□□□ 1.18
HDLBP-238ENST00000479894 NFAT5O94916 1531 aa22.42■■□□□ 1.18
HDLBP-238ENST00000479894 KLHL34Q8N239 644 aa22.42■■□□□ 1.18
HDLBP-238ENST00000479894 LRRC4BQ9NT99 713 aa22.42■■□□□ 1.18
HDLBP-238ENST00000479894 SLC27A3Q5K4L6 730 aa22.41■■□□□ 1.18
HDLBP-238ENST00000479894 ZNF692Q9BU19 519 aaPredicted RBP22.4■■□□□ 1.18
HDLBP-238ENST00000479894 PNPLA7Q6ZV29 1317 aa22.38■■□□□ 1.17
HDLBP-238ENST00000479894 TTC21BQ7Z4L5 1316 aa22.38■■□□□ 1.17
HDLBP-238ENST00000479894 TTC21AQ8NDW8 1320 aa22.38■■□□□ 1.17
HDLBP-238ENST00000479894 NLGN2Q8NFZ4 835 aa22.38■■□□□ 1.17
HDLBP-238ENST00000479894 ATP10DQ9P241 1426 aa22.37■■□□□ 1.17
HDLBP-238ENST00000479894 IL2RBP14784 551 aa22.36■■□□□ 1.17
HDLBP-238ENST00000479894 HSPA6P17066 643 aa22.36■■□□□ 1.17
HDLBP-238ENST00000479894 NBPF1Q3BBV0 1214 aa22.36■■□□□ 1.17
HDLBP-238ENST00000479894 LY75O60449 1722 aa22.36■■□□□ 1.17
HDLBP-238ENST00000479894 USP54Q70EL1 1684 aa22.35■■□□□ 1.17
HDLBP-238ENST00000479894 LTN1O94822 1766 aa22.35■■□□□ 1.17
HDLBP-238ENST00000479894 ERBB3P21860 1342 aa22.34■■□□□ 1.17
HDLBP-238ENST00000479894 YBX3P16989 372 aaKnown RBP eCLIP22.34■■□□□ 1.171e-9■□□□□ 8.6
HDLBP-238ENST00000479894 SOX12O15370 315 aa22.33■■□□□ 1.17
HDLBP-238ENST00000479894 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
HDLBP-238ENST00000479894 TFCP2L1Q9NZI6 479 aa22.32■■□□□ 1.16
HDLBP-238ENST00000479894 MON2Q7Z3U7 1717 aa22.31■■□□□ 1.16
HDLBP-238ENST00000479894 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
HDLBP-238ENST00000479894 ADCY9O60503 1353 aa22.3■■□□□ 1.16
HDLBP-238ENST00000479894 NLRP2Q9NX02 1062 aa22.3■■□□□ 1.16
HDLBP-238ENST00000479894 FAM208AQ9UK61 1670 aaKnown RBP22.27■■□□□ 1.16
HDLBP-238ENST00000479894 USP31Q70CQ4 1352 aa22.26■■□□□ 1.15
HDLBP-238ENST00000479894 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
HDLBP-238ENST00000479894 KTN1Q86UP2 1357 aaKnown RBP22.24■■□□□ 1.15
HDLBP-238ENST00000479894 CD2APQ9Y5K6 639 aa22.23■■□□□ 1.15
HDLBP-238ENST00000479894 ANKRD36BQ8N2N9 1353 aa22.23■■□□□ 1.15
HDLBP-238ENST00000479894 ANKRD24Q8TF21 1146 aa22.22■■□□□ 1.15
HDLBP-238ENST00000479894 COL23A1Q86Y22 540 aaPredicted RBP22.19■■□□□ 1.14
HDLBP-238ENST00000479894 KCNQ4P56696 695 aa22.18■■□□□ 1.14
HDLBP-238ENST00000479894 DDX54Q8TDD1 881 aaKnown RBP22.18■■□□□ 1.14
HDLBP-238ENST00000479894 NSD2O96028 1365 aa22.17■■□□□ 1.14
HDLBP-238ENST00000479894 HMGB2P26583 209 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms