RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 WIZO95785 1651 aa10.34□□□□□ -0.75
SSR3-207ENST00000478842 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
SSR3-207ENST00000478842 RFX1P22670 979 aa10.33□□□□□ -0.76
SSR3-207ENST00000478842 SLFNL1Q499Z3 407 aa10.33□□□□□ -0.76
SSR3-207ENST00000478842 CEP126Q9P2H0 1117 aa10.33□□□□□ -0.76
SSR3-207ENST00000478842 MAFBQ9Y5Q3 323 aaPredicted RBP10.33□□□□□ -0.76
SSR3-207ENST00000478842 MAGEB6P1A0A0J9YX57 407 aa10.32□□□□□ -0.76
SSR3-207ENST00000478842 TBC1D9Q6ZT07 1266 aa10.32□□□□□ -0.76
SSR3-207ENST00000478842 DZIP3Q86Y13 1208 aaKnown RBP10.32□□□□□ -0.76
SSR3-207ENST00000478842 URB2Q14146 1524 aaKnown RBP10.31□□□□□ -0.76
SSR3-207ENST00000478842 ARHGEF11O15085 1522 aa10.3□□□□□ -0.76
SSR3-207ENST00000478842 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.3□□□□□ -0.76
SSR3-207ENST00000478842 LZTS3O60299 673 aaPredicted RBP10.3□□□□□ -0.76
SSR3-207ENST00000478842 SRPK2P78362 688 aaKnown RBP10.3□□□□□ -0.76
SSR3-207ENST00000478842 LINC01559Q495D7 138 aa10.3□□□□□ -0.76
SSR3-207ENST00000478842 CARD14Q9BXL6 1004 aa10.3□□□□□ -0.76
SSR3-207ENST00000478842 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
SSR3-207ENST00000478842 SKIP12755 728 aa10.29□□□□□ -0.76
SSR3-207ENST00000478842 RPIAP49247 311 aa10.29□□□□□ -0.76
SSR3-207ENST00000478842 PLEKHM2Q8IWE5 1019 aa10.29□□□□□ -0.76
SSR3-207ENST00000478842 SLC10A4Q96EP9 437 aa10.29□□□□□ -0.76
SSR3-207ENST00000478842 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.29□□□□□ -0.76
SSR3-207ENST00000478842 CDV3Q9UKY7 258 aaKnown RBP10.29□□□□□ -0.76
SSR3-207ENST00000478842 WNT7BP56706 349 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 SH3BP2P78314 561 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 TRIM32Q13049 653 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 MAP7D1Q3KQU3 841 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 ERFEQ4G0M1 354 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 RNF135Q8IUD6 432 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 RETREG2Q8NC44 543 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 FOXJ1Q92949 421 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
SSR3-207ENST00000478842 USP17L5A8MUK1 530 aa10.27□□□□□ -0.77
SSR3-207ENST00000478842 PIK3CDO00329 1044 aa10.27□□□□□ -0.77
SSR3-207ENST00000478842 NBPF20Q3BBV1 942 aa10.27□□□□□ -0.77
SSR3-207ENST00000478842 CCDC125Q86Z20 511 aa10.27□□□□□ -0.77
SSR3-207ENST00000478842 TRMT44Q8IYL2 757 aaKnown RBP10.27□□□□□ -0.77
SSR3-207ENST00000478842 PHTF2Q8N3S3 785 aa10.27□□□□□ -0.77
SSR3-207ENST00000478842 C1QTNF2Q9BXJ5 285 aa10.27□□□□□ -0.77
SSR3-207ENST00000478842 VRTNQ9H8Y1 702 aa10.27□□□□□ -0.77
SSR3-207ENST00000478842 PRDM2Q13029 1718 aa10.27□□□□□ -0.77
SSR3-207ENST00000478842 USP17L3A6NCW0 530 aa10.26□□□□□ -0.77
SSR3-207ENST00000478842 USP17L4A6NCW7 530 aa10.26□□□□□ -0.77
SSR3-207ENST00000478842 CD2BP2O95400 341 aaKnown RBP10.26□□□□□ -0.77
SSR3-207ENST00000478842 CSB-PGBD3P0DP91 1061 aa10.26□□□□□ -0.77
SSR3-207ENST00000478842 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
SSR3-207ENST00000478842 USP17L1Q7RTZ2 530 aa10.26□□□□□ -0.77
SSR3-207ENST00000478842 IFT140Q96RY7 1462 aa10.25□□□□□ -0.77
SSR3-207ENST00000478842 ATG7O95352 703 aa10.25□□□□□ -0.77
SSR3-207ENST00000478842 VARSP26640 1264 aaKnown RBP10.25□□□□□ -0.77
SSR3-207ENST00000478842 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
SSR3-207ENST00000478842 IFFO2Q5TF58 517 aa10.25□□□□□ -0.77
SSR3-207ENST00000478842 FAM174AQ8TBP5 190 aa10.25□□□□□ -0.77
SSR3-207ENST00000478842 CHIC2Q9UKJ5 165 aa10.25□□□□□ -0.77
SSR3-207ENST00000478842 USTQ9Y2C2 406 aa10.25□□□□□ -0.77
SSR3-207ENST00000478842 MMRN1Q13201 1228 aa10.24□□□□□ -0.77
SSR3-207ENST00000478842 PLPP7Q8NBV4 271 aa10.24□□□□□ -0.77
SSR3-207ENST00000478842 PLA2G2CQ5R387 149 aa10.23□□□□□ -0.77
SSR3-207ENST00000478842 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
SSR3-207ENST00000478842 KANK4Q5T7N3 995 aaPredicted RBP10.22□□□□□ -0.77
SSR3-207ENST00000478842 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
SSR3-207ENST00000478842 ZNF608Q9ULD9 1512 aaPredicted RBP10.22□□□□□ -0.77
SSR3-207ENST00000478842 ATP5J2-PTCD1G3V325 749 aa10.21□□□□□ -0.77
SSR3-207ENST00000478842 EML3Q32P44 896 aa10.21□□□□□ -0.77
SSR3-207ENST00000478842 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.77
SSR3-207ENST00000478842 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
SSR3-207ENST00000478842 GIGYF1O75420 1035 aaPredicted RBP10.2□□□□□ -0.78
SSR3-207ENST00000478842 TOP2AP11388 1531 aaKnown RBP10.2□□□□□ -0.78
SSR3-207ENST00000478842 NCOA4Q13772 614 aa10.2□□□□□ -0.78
SSR3-207ENST00000478842 ELOAQ14241 798 aaKnown RBP10.2□□□□□ -0.78
SSR3-207ENST00000478842 DOLKQ9UPQ8 538 aa10.2□□□□□ -0.78
SSR3-207ENST00000478842 MAP4K5Q9Y4K4 846 aa10.2□□□□□ -0.78
SSR3-207ENST00000478842 ESPNB1AK53 854 aa10.19□□□□□ -0.78
SSR3-207ENST00000478842 SKOR1P84550 965 aa10.19□□□□□ -0.78
SSR3-207ENST00000478842 CDCA8Q53HL2 280 aa10.19□□□□□ -0.78
SSR3-207ENST00000478842 TRIM50Q86XT4 487 aa10.19□□□□□ -0.78
SSR3-207ENST00000478842 DEPDC4Q8N2C3 294 aa10.19□□□□□ -0.78
SSR3-207ENST00000478842 EHBP1Q8NDI1 1231 aa10.19□□□□□ -0.78
SSR3-207ENST00000478842 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
SSR3-207ENST00000478842 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
SSR3-207ENST00000478842 ABCC8Q09428 1581 aa10.18□□□□□ -0.78
SSR3-207ENST00000478842 RSF1Q96T23 1441 aaPredicted RBP10.18□□□□□ -0.78
SSR3-207ENST00000478842 FAM196BA6NMK8 535 aa10.18□□□□□ -0.78
SSR3-207ENST00000478842 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
SSR3-207ENST00000478842 TRAF7Q6Q0C0 670 aa10.18□□□□□ -0.78
SSR3-207ENST00000478842 NOD1Q9Y239 953 aa10.18□□□□□ -0.78
SSR3-207ENST00000478842 EIF4G3O43432 1585 aaKnown RBP10.18□□□□□ -0.78
SSR3-207ENST00000478842 CHD1O14646 1710 aa10.17□□□□□ -0.78
SSR3-207ENST00000478842 ZBTB7CA1YPR0 619 aa10.17□□□□□ -0.78
SSR3-207ENST00000478842 ATP1A2P50993 1020 aa10.17□□□□□ -0.78
SSR3-207ENST00000478842 KCTD15Q96SI1 283 aaPredicted RBP10.17□□□□□ -0.78
SSR3-207ENST00000478842 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
SSR3-207ENST00000478842 RC3H1Q5TC82 1133 aaKnown RBP10.16□□□□□ -0.78
SSR3-207ENST00000478842 MPNDQ8N594 471 aa10.16□□□□□ -0.78
SSR3-207ENST00000478842 CCDC85AQ96PX6 553 aaPredicted RBP10.16□□□□□ -0.78
SSR3-207ENST00000478842 TOPBP1Q92547 1522 aa10.16□□□□□ -0.78
SSR3-207ENST00000478842 RASA1P20936 1047 aa10.15□□□□□ -0.78
SSR3-207ENST00000478842 USP4Q13107 963 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms