RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 NRG2O14511 850 aaPredicted RBP5.52□□□□□ -1.53
FNDC3B-209ENST00000478016 ARID5BQ14865 1188 aa5.52□□□□□ -1.53
FNDC3B-209ENST00000478016 NBPF20Q3BBV1 942 aa5.52□□□□□ -1.53
FNDC3B-209ENST00000478016 VASH1Q7L8A9 365 aaPredicted RBP5.52□□□□□ -1.53
FNDC3B-209ENST00000478016 FNBP4Q8N3X1 1017 aaPredicted RBP5.52□□□□□ -1.53
FNDC3B-209ENST00000478016 ZMYND15Q9H091 742 aa5.52□□□□□ -1.53
FNDC3B-209ENST00000478016 J3QL48 77 aa5.51□□□□□ -1.53
FNDC3B-209ENST00000478016 ADH1CP00326 375 aa5.51□□□□□ -1.53
FNDC3B-209ENST00000478016 SOX11P35716 441 aa5.51□□□□□ -1.53
FNDC3B-209ENST00000478016 TRIM26Q12899 539 aaPredicted RBP5.51□□□□□ -1.53
FNDC3B-209ENST00000478016 WASF2Q9Y6W5 498 aa5.51□□□□□ -1.53
FNDC3B-209ENST00000478016 FSHRP23945 695 aa5.5□□□□□ -1.53
FNDC3B-209ENST00000478016 NR5A1Q13285 461 aa5.5□□□□□ -1.53
FNDC3B-209ENST00000478016 KCTD15Q96SI1 283 aaPredicted RBP5.5□□□□□ -1.53
FNDC3B-209ENST00000478016 FAM187AA6NFU0 413 aa5.49□□□□□ -1.53
FNDC3B-209ENST00000478016 TRAK2O60296 914 aa5.49□□□□□ -1.53
FNDC3B-209ENST00000478016 SMPD1P17405 629 aa5.49□□□□□ -1.53
FNDC3B-209ENST00000478016 GRM5P41594 1212 aa5.49□□□□□ -1.53
FNDC3B-209ENST00000478016 SEMA3FQ13275 785 aa5.49□□□□□ -1.53
FNDC3B-209ENST00000478016 POM121CA8CG34 1229 aa5.48□□□□□ -1.53
FNDC3B-209ENST00000478016 DGAT1O75907 488 aa5.48□□□□□ -1.53
FNDC3B-209ENST00000478016 NNTQ13423 1086 aa5.48□□□□□ -1.53
FNDC3B-209ENST00000478016 PKDCCQ504Y2 493 aa5.48□□□□□ -1.53
FNDC3B-209ENST00000478016 CCDC125Q86Z20 511 aa5.48□□□□□ -1.53
FNDC3B-209ENST00000478016 SEPT12Q8IYM1 358 aa5.48□□□□□ -1.53
FNDC3B-209ENST00000478016 ESPNB1AK53 854 aa5.47□□□□□ -1.53
FNDC3B-209ENST00000478016 GIGYF1O75420 1035 aaPredicted RBP5.47□□□□□ -1.53
FNDC3B-209ENST00000478016 DHX9Q08211 1270 aaKnown RBP5.47□□□□□ -1.53
FNDC3B-209ENST00000478016 INTS6LQ5JSJ4 861 aaKnown RBP5.47□□□□□ -1.53
FNDC3B-209ENST00000478016 RNF20Q5VTR2 975 aa5.47□□□□□ -1.53
FNDC3B-209ENST00000478016 CCDC116Q8IYX3 515 aa5.47□□□□□ -1.53
FNDC3B-209ENST00000478016 ALG2Q9H553 416 aa5.47□□□□□ -1.53
FNDC3B-209ENST00000478016 CEP126Q9P2H0 1117 aa5.47□□□□□ -1.53
FNDC3B-209ENST00000478016 LOC105371045A0A1W2PR82 267 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 NR3C2P08235 984 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 RAB15P59190 212 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 SLFNL1Q499Z3 407 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 HDGFL1Q5TGJ6 251 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 HPS1Q92902 700 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 GLMNQ92990 594 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 TRIM52Q96A61 297 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 BCL11AQ9H165 835 aa5.46□□□□□ -1.54
FNDC3B-209ENST00000478016 AVPP01185 164 aa5.45□□□□□ -1.54
FNDC3B-209ENST00000478016 PPP1R26Q5T8A7 1209 aaPredicted RBP5.45□□□□□ -1.54
FNDC3B-209ENST00000478016 ADAMTS19Q8TE59 1207 aa5.45□□□□□ -1.54
FNDC3B-209ENST00000478016 ZNF777Q9ULD5 760 aaPredicted RBP5.45□□□□□ -1.54
FNDC3B-209ENST00000478016 CDK11AQ9UQ88 783 aaPredicted RBP5.45□□□□□ -1.54
FNDC3B-209ENST00000478016 EMILIN1Q9Y6C2 1016 aa5.45□□□□□ -1.54
FNDC3B-209ENST00000478016 WDR4P57081 412 aaKnown RBP5.44□□□□□ -1.54
FNDC3B-209ENST00000478016 CTC1Q2NKJ3 1217 aa5.44□□□□□ -1.54
FNDC3B-209ENST00000478016 RNF135Q8IUD6 432 aa5.44□□□□□ -1.54
FNDC3B-209ENST00000478016 CALR3Q96L12 384 aaKnown RBP5.44□□□□□ -1.54
FNDC3B-209ENST00000478016 PGPEP1Q9NXJ5 209 aa5.44□□□□□ -1.54
FNDC3B-209ENST00000478016 ERVH48-1M5A8F1 160 aa5.43□□□□□ -1.54
FNDC3B-209ENST00000478016 SMCPP49901 116 aaPredicted RBP5.43□□□□□ -1.54
FNDC3B-209ENST00000478016 Q6ZNB5 142 aa5.43□□□□□ -1.54
FNDC3B-209ENST00000478016 PHTF2Q8N3S3 785 aa5.43□□□□□ -1.54
FNDC3B-209ENST00000478016 NFATC2IPQ8NCF5 419 aa5.43□□□□□ -1.54
FNDC3B-209ENST00000478016 ITPKCQ96DU7 683 aa5.43□□□□□ -1.54
FNDC3B-209ENST00000478016 KLF16Q9BXK1 252 aaPredicted RBP5.43□□□□□ -1.54
FNDC3B-209ENST00000478016 AXIN1O15169 862 aa5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 CAPN5O15484 640 aaPredicted RBP5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 ZIC2O95409 532 aaPredicted RBP5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 PDIA4P13667 645 aaKnown RBP5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 TIMP2P16035 220 aa5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 MAP7D1Q3KQU3 841 aa5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 CRIPAKQ8N1N5 446 aa5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 DOLKQ9UPQ8 538 aa5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 PCDHB11Q9Y5F2 797 aa5.42□□□□□ -1.54
FNDC3B-209ENST00000478016 PIK3CDO00329 1044 aa5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 PLPP7Q8NBV4 271 aa5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 ZNF784Q8NCA9 323 aaPredicted RBP5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 UBE2Q2Q8WVN8 375 aa5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 CCDC85AQ96PX6 553 aaPredicted RBP5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 UCN2Q96RP3 112 aa5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 ZFAND3Q9H8U3 227 aa5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 TMPRSS4Q9NRS4 437 aa5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 CHIC2Q9UKJ5 165 aa5.41□□□□□ -1.54
FNDC3B-209ENST00000478016 HMGB1P09429 215 aaKnown RBP5.4□□□□□ -1.54
FNDC3B-209ENST00000478016 SKIP12755 728 aa5.4□□□□□ -1.54
FNDC3B-209ENST00000478016 ERVK-9P63128 1117 aa5.4□□□□□ -1.54
FNDC3B-209ENST00000478016 ESF1Q9H501 851 aaKnown RBP5.4□□□□□ -1.54
FNDC3B-209ENST00000478016 CYLDQ9NQC7 956 aa5.4□□□□□ -1.54
FNDC3B-209ENST00000478016 ARID3CA6NKF2 412 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 ST8SIA5O15466 376 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 ATP9BO43861 1147 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 LZTS3O60299 673 aaPredicted RBP5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 LILRA1O75019 489 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 MYCP01106 439 aaPredicted RBP5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 USP4Q13107 963 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 CC2D2BQ6DHV5 1058 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 TRAF7Q6Q0C0 670 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 Q6ZVU0 165 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 MEIOBQ8N635 442 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 SIRT1Q96EB6 747 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 AAASQ9NRG9 546 aa5.39□□□□□ -1.55
FNDC3B-209ENST00000478016 USP17L5A8MUK1 530 aa5.38□□□□□ -1.55
FNDC3B-209ENST00000478016 UPP2O95045 317 aa5.38□□□□□ -1.55
FNDC3B-209ENST00000478016 CBLBQ13191 982 aa5.38□□□□□ -1.55
FNDC3B-209ENST00000478016 TSGA10IPQ3SY00 556 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms