RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 TRIM26Q12899 539 aaPredicted RBP8.01□□□□□ -1.13
TRA2B-211ENST00000477939 SLIT3O75094 1523 aa8.01□□□□□ -1.13
TRA2B-211ENST00000477939 USP6P35125 1406 aa8.01□□□□□ -1.13
TRA2B-211ENST00000477939 PARP4Q9UKK3 1724 aaKnown RBP8□□□□□ -1.13
TRA2B-211ENST00000477939 COL5A2P05997 1499 aaPredicted RBP8□□□□□ -1.13
TRA2B-211ENST00000477939 AKAP12Q02952 1782 aa8□□□□□ -1.13
TRA2B-211ENST00000477939 RREB1Q92766 1687 aa8□□□□□ -1.13
TRA2B-211ENST00000477939 SRPK2P78362 688 aaKnown RBP8□□□□□ -1.13
TRA2B-211ENST00000477939 RBM10P98175 930 aaKnown RBP8□□□□□ -1.13
TRA2B-211ENST00000477939 CABP2Q9NPB3 220 aa8□□□□□ -1.13
TRA2B-211ENST00000477939 STRN4Q9NRL3 753 aa8□□□□□ -1.13
TRA2B-211ENST00000477939 WNK3Q9BYP7 1800 aa8□□□□□ -1.13
TRA2B-211ENST00000477939 LRRC37A3O60309 1634 aa8□□□□□ -1.13
TRA2B-211ENST00000477939 BAG6P46379 1132 aa7.99□□□□□ -1.13
TRA2B-211ENST00000477939 EN1Q05925 392 aaPredicted RBP7.99□□□□□ -1.13
TRA2B-211ENST00000477939 NUP188Q5SRE5 1749 aa7.99□□□□□ -1.13
TRA2B-211ENST00000477939 DHX37Q8IY37 1157 aaKnown RBP7.99□□□□□ -1.13
TRA2B-211ENST00000477939 ABTB2Q8N961 1025 aa7.99□□□□□ -1.13
TRA2B-211ENST00000477939 L3MBTL2Q969R5 705 aa7.99□□□□□ -1.13
TRA2B-211ENST00000477939 COL18A1P39060 1754 aa7.99□□□□□ -1.13
TRA2B-211ENST00000477939 PEAK1Q9H792 1746 aa7.98□□□□□ -1.13
TRA2B-211ENST00000477939 PSDA5PKW4 1024 aaPredicted RBP7.98□□□□□ -1.13
TRA2B-211ENST00000477939 LARP1Q6PKG0 1096 aaKnown RBP7.98□□□□□ -1.13
TRA2B-211ENST00000477939 BARGINQ6ZT62 677 aa7.98□□□□□ -1.13
TRA2B-211ENST00000477939 ZMYND15Q9H091 742 aa7.98□□□□□ -1.13
TRA2B-211ENST00000477939 USP35Q9P2H5 1018 aa7.98□□□□□ -1.13
TRA2B-211ENST00000477939 BRD4O60885 1362 aaPredicted RBP7.97□□□□□ -1.13
TRA2B-211ENST00000477939 ROCK2O75116 1388 aaKnown RBP7.97□□□□□ -1.13
TRA2B-211ENST00000477939 GCP02774 474 aa7.97□□□□□ -1.13
TRA2B-211ENST00000477939 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
TRA2B-211ENST00000477939 SIN3AQ96ST3 1273 aa7.97□□□□□ -1.13
TRA2B-211ENST00000477939 PCGF6Q9BYE7 350 aa7.97□□□□□ -1.13
TRA2B-211ENST00000477939 CABP1Q9NZU7 370 aa7.97□□□□□ -1.13
TRA2B-211ENST00000477939 MON2Q7Z3U7 1717 aa7.97□□□□□ -1.13
TRA2B-211ENST00000477939 RGPD5Q99666 1765 aa7.97□□□□□ -1.13
TRA2B-211ENST00000477939 CRB1P82279 1406 aa7.96□□□□□ -1.13
TRA2B-211ENST00000477939 TRIM37O94972 964 aa7.96□□□□□ -1.14
TRA2B-211ENST00000477939 EZH2Q15910 746 aaKnown RBP7.96□□□□□ -1.14
TRA2B-211ENST00000477939 NLRP13Q86W25 1043 aa7.96□□□□□ -1.14
TRA2B-211ENST00000477939 TCP11L2Q8N4U5 519 aa7.96□□□□□ -1.14
TRA2B-211ENST00000477939 NFAT5O94916 1531 aa7.96□□□□□ -1.14
TRA2B-211ENST00000477939 SBF2Q86WG5 1849 aa7.96□□□□□ -1.14
TRA2B-211ENST00000477939 AATKQ6ZMQ8 1374 aa7.96□□□□□ -1.14
TRA2B-211ENST00000477939 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 CPSF1Q10570 1443 aaKnown RBP7.95□□□□□ -1.14
TRA2B-211ENST00000477939 RGPD3A6NKT7 1758 aaPredicted RBP7.95□□□□□ -1.14
TRA2B-211ENST00000477939 RGPD4Q7Z3J3 1758 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 UTRNP46939 3433 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 DEKP35659 375 aaKnown RBP7.95□□□□□ -1.14
TRA2B-211ENST00000477939 EVA1CP58658 441 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 FAM196AQ6ZSG2 479 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 CAMKK2Q96RR4 588 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 POLR3GLQ9BT43 218 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 EVC2Q86UK5 1308 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 PARD3Q8TEW0 1356 aa7.95□□□□□ -1.14
TRA2B-211ENST00000477939 A0A0U1RQG5 324 aaPredicted RBP7.94□□□□□ -1.14
TRA2B-211ENST00000477939 NLRP6P59044 892 aa7.94□□□□□ -1.14
TRA2B-211ENST00000477939 R3HDM1Q15032 1099 aaKnown RBP7.94□□□□□ -1.14
TRA2B-211ENST00000477939 TSHZ2Q9NRE2 1034 aa7.94□□□□□ -1.14
TRA2B-211ENST00000477939 THRAP3Q9Y2W1 955 aaKnown RBP7.94□□□□□ -1.14
TRA2B-211ENST00000477939 SBNO2Q9Y2G9 1366 aa7.94□□□□□ -1.14
TRA2B-211ENST00000477939 OVOS2A0A0G2JMS6 1433 aa7.94□□□□□ -1.14
TRA2B-211ENST00000477939 OVOS2A0A0J9YW53 1432 aa7.94□□□□□ -1.14
TRA2B-211ENST00000477939 OVOS2Q6IE36 1432 aa7.94□□□□□ -1.14
TRA2B-211ENST00000477939 CD163L1Q9NR16 1453 aa7.94□□□□□ -1.14
TRA2B-211ENST00000477939 ABCC6O95255 1503 aa7.93□□□□□ -1.14
TRA2B-211ENST00000477939 ZBTB7CA1YPR0 619 aa7.93□□□□□ -1.14
TRA2B-211ENST00000477939 PDE3BQ13370 1112 aa7.93□□□□□ -1.14
TRA2B-211ENST00000477939 CCDC136Q96JN2 1154 aa7.93□□□□□ -1.14
TRA2B-211ENST00000477939 TTC21BQ7Z4L5 1316 aa7.93□□□□□ -1.14
TRA2B-211ENST00000477939 LTN1O94822 1766 aa7.92□□□□□ -1.14
TRA2B-211ENST00000477939 APBA3O96018 575 aa7.92□□□□□ -1.14
TRA2B-211ENST00000477939 NCLP19338 710 aaKnown RBP7.92□□□□□ -1.14
TRA2B-211ENST00000477939 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
TRA2B-211ENST00000477939 WDR17Q8IZU2 1322 aa7.92□□□□□ -1.14
TRA2B-211ENST00000477939 ARHGEF25Q86VW2 580 aa7.91□□□□□ -1.14
TRA2B-211ENST00000477939 TTC21AQ8NDW8 1320 aa7.91□□□□□ -1.14
TRA2B-211ENST00000477939 KTN1Q86UP2 1357 aaKnown RBP7.91□□□□□ -1.14
TRA2B-211ENST00000477939 TNS2Q63HR2 1409 aa7.9□□□□□ -1.14
TRA2B-211ENST00000477939 SOX12O15370 315 aa7.9□□□□□ -1.14
TRA2B-211ENST00000477939 CLSTN1O94985 981 aa7.9□□□□□ -1.14
TRA2B-211ENST00000477939 TOM1L2Q6ZVM7 507 aa7.9□□□□□ -1.14
TRA2B-211ENST00000477939 PUS7Q96PZ0 661 aaKnown RBP7.9□□□□□ -1.14
TRA2B-211ENST00000477939 ZNF692Q9BU19 519 aaPredicted RBP7.9□□□□□ -1.14
TRA2B-211ENST00000477939 CASZ1Q86V15 1759 aa7.89□□□□□ -1.15
TRA2B-211ENST00000477939 BCL9O00512 1426 aa7.89□□□□□ -1.15
TRA2B-211ENST00000477939 DDB1Q16531 1140 aa7.89□□□□□ -1.15
TRA2B-211ENST00000477939 PTF1AQ7RTS3 328 aa7.89□□□□□ -1.15
TRA2B-211ENST00000477939 KCNH5Q8NCM2 988 aa7.89□□□□□ -1.15
TRA2B-211ENST00000477939 GOLGB1Q14789 3259 aaKnown RBP7.89□□□□□ -1.15
TRA2B-211ENST00000477939 NHSQ6T4R5 1651 aa7.89□□□□□ -1.15
TRA2B-211ENST00000477939 EDC4Q6P2E9 1401 aaKnown RBP7.88□□□□□ -1.15
TRA2B-211ENST00000477939 A0A1W2PP64 1363 aa7.88□□□□□ -1.15
TRA2B-211ENST00000477939 USP31Q70CQ4 1352 aa7.88□□□□□ -1.15
TRA2B-211ENST00000477939 C11orf95C9JLR9 678 aaPredicted RBP7.88□□□□□ -1.15
TRA2B-211ENST00000477939 PAXIP1Q6ZW49 1069 aaPredicted RBP7.88□□□□□ -1.15
TRA2B-211ENST00000477939 VSIG10Q8N0Z9 540 aa7.88□□□□□ -1.15
TRA2B-211ENST00000477939 MARCH10Q8NA82 808 aaPredicted RBP7.88□□□□□ -1.15
TRA2B-211ENST00000477939 IPO4Q8TEX9 1081 aaKnown RBP7.88□□□□□ -1.15
TRA2B-211ENST00000477939 CARD11Q9BXL7 1154 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms