RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
LSM2-212ENST00000477182 BCL9O00512 1426 aa16.47■□□□□ 0.23
LSM2-212ENST00000477182 TXNRD1Q16881 649 aa16.47■□□□□ 0.23
LSM2-212ENST00000477182 ABTB2Q8N961 1025 aa16.47■□□□□ 0.23
LSM2-212ENST00000477182 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
LSM2-212ENST00000477182 NUDT16Q96DE0 195 aaKnown RBP16.47■□□□□ 0.23
LSM2-212ENST00000477182 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
LSM2-212ENST00000477182 LRRC37A3O60309 1634 aa16.47■□□□□ 0.23
LSM2-212ENST00000477182 ADGRB1O14514 1584 aa16.47■□□□□ 0.23
LSM2-212ENST00000477182 USP19O94966 1318 aa16.45■□□□□ 0.22
LSM2-212ENST00000477182 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
LSM2-212ENST00000477182 AKAP12Q02952 1782 aa16.44■□□□□ 0.22
LSM2-212ENST00000477182 POLR3AO14802 1390 aaPredicted RBP16.44■□□□□ 0.22
LSM2-212ENST00000477182 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
LSM2-212ENST00000477182 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
LSM2-212ENST00000477182 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
LSM2-212ENST00000477182 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
LSM2-212ENST00000477182 GCP02774 474 aa16.43■□□□□ 0.22
LSM2-212ENST00000477182 ACEP12821 1306 aa16.43■□□□□ 0.22
LSM2-212ENST00000477182 TOM1L2Q6ZVM7 507 aa16.41■□□□□ 0.22
LSM2-212ENST00000477182 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
LSM2-212ENST00000477182 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
LSM2-212ENST00000477182 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
LSM2-212ENST00000477182 WNK3Q9BYP7 1800 aa16.4■□□□□ 0.22
LSM2-212ENST00000477182 TRPM1Q7Z4N2 1603 aa16.39■□□□□ 0.21
LSM2-212ENST00000477182 PLEKHG3A1L390 1219 aa16.39■□□□□ 0.21
LSM2-212ENST00000477182 TOPAZ1Q8N9V7 1692 aa16.38■□□□□ 0.21
LSM2-212ENST00000477182 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
LSM2-212ENST00000477182 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
LSM2-212ENST00000477182 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
LSM2-212ENST00000477182 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
LSM2-212ENST00000477182 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
LSM2-212ENST00000477182 ZBTB7CA1YPR0 619 aa16.36■□□□□ 0.21
LSM2-212ENST00000477182 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
LSM2-212ENST00000477182 SLC16A10Q8TF71 515 aa16.36■□□□□ 0.21
LSM2-212ENST00000477182 BRD4O60885 1362 aaPredicted RBP16.36■□□□□ 0.21
LSM2-212ENST00000477182 ARHGEF28Q8N1W1 1705 aaKnown RBP16.36■□□□□ 0.21
LSM2-212ENST00000477182 EXOC5O00471 708 aa16.35■□□□□ 0.21
LSM2-212ENST00000477182 POLD1P28340 1107 aa16.35■□□□□ 0.21
LSM2-212ENST00000477182 WDR17Q8IZU2 1322 aa16.35■□□□□ 0.21
LSM2-212ENST00000477182 HSPA6P17066 643 aa16.34■□□□□ 0.21
LSM2-212ENST00000477182 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
LSM2-212ENST00000477182 PAPPAQ13219 1627 aa16.33■□□□□ 0.2
LSM2-212ENST00000477182 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
LSM2-212ENST00000477182 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
LSM2-212ENST00000477182 COL18A1P39060 1754 aa16.31■□□□□ 0.2
LSM2-212ENST00000477182 NLRP6P59044 892 aa16.3■□□□□ 0.2
LSM2-212ENST00000477182 GPBP1L1Q9HC44 474 aaPredicted RBP16.3■□□□□ 0.2
LSM2-212ENST00000477182 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
LSM2-212ENST00000477182 SLIT3O75094 1523 aa16.29■□□□□ 0.2
LSM2-212ENST00000477182 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
LSM2-212ENST00000477182 QSER1Q2KHR3 1735 aa16.29■□□□□ 0.2
LSM2-212ENST00000477182 CSB-PGBD3P0DP91 1061 aa16.28■□□□□ 0.2
LSM2-212ENST00000477182 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
LSM2-212ENST00000477182 NBPF1Q3BBV0 1214 aa16.28■□□□□ 0.2
LSM2-212ENST00000477182 AXIN2Q9Y2T1 843 aa16.28■□□□□ 0.2
LSM2-212ENST00000477182 TNS2Q63HR2 1409 aa16.28■□□□□ 0.2
LSM2-212ENST00000477182 ROCK2O75116 1388 aaKnown RBP16.27■□□□□ 0.2
LSM2-212ENST00000477182 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
LSM2-212ENST00000477182 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
LSM2-212ENST00000477182 NLGN2Q8NFZ4 835 aa16.26■□□□□ 0.19
LSM2-212ENST00000477182 CPSF1Q10570 1443 aaKnown RBP16.26■□□□□ 0.19
LSM2-212ENST00000477182 BTAF1O14981 1849 aa16.25■□□□□ 0.19
LSM2-212ENST00000477182 YBX3P16989 372 aaKnown RBP eCLIP16.25■□□□□ 0.192e-9■■□□□ 14.2
LSM2-212ENST00000477182 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
LSM2-212ENST00000477182 ACSBG1Q96GR2 724 aa16.25■□□□□ 0.19
LSM2-212ENST00000477182 USP6P35125 1406 aa16.25■□□□□ 0.19
LSM2-212ENST00000477182 KAT6BQ8WYB5 2073 aa16.25■□□□□ 0.19
LSM2-212ENST00000477182 RGPD5Q99666 1765 aa16.24■□□□□ 0.19
LSM2-212ENST00000477182 SRPK2P78362 688 aaKnown RBP16.24■□□□□ 0.19
LSM2-212ENST00000477182 SLC27A3Q5K4L6 730 aa16.24■□□□□ 0.19
LSM2-212ENST00000477182 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
LSM2-212ENST00000477182 ARHGEF25Q86VW2 580 aa16.23■□□□□ 0.19
LSM2-212ENST00000477182 CARD11Q9BXL7 1154 aa16.23■□□□□ 0.19
LSM2-212ENST00000477182 LRRC4BQ9NT99 713 aa16.23■□□□□ 0.19
LSM2-212ENST00000477182 ABCC6O95255 1503 aa16.23■□□□□ 0.19
LSM2-212ENST00000477182 PNPLA7Q6ZV29 1317 aa16.21■□□□□ 0.19
LSM2-212ENST00000477182 TFCP2L1Q9NZI6 479 aa16.21■□□□□ 0.19
LSM2-212ENST00000477182 PIK3C2AO00443 1686 aa16.2■□□□□ 0.18
LSM2-212ENST00000477182 ADCY9O60503 1353 aa16.19■□□□□ 0.18
LSM2-212ENST00000477182 APLP1P51693 650 aa16.19■□□□□ 0.18
LSM2-212ENST00000477182 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
LSM2-212ENST00000477182 TUBGCP6Q96RT7 1819 aa16.17■□□□□ 0.18
LSM2-212ENST00000477182 USP47Q96K76 1375 aa16.17■□□□□ 0.18
LSM2-212ENST00000477182 ZNF526Q8TF50 670 aaPredicted RBP16.17■□□□□ 0.18
LSM2-212ENST00000477182 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
LSM2-212ENST00000477182 CABP1Q9NZU7 370 aa16.17■□□□□ 0.18
LSM2-212ENST00000477182 IL2RBP14784 551 aa16.16■□□□□ 0.18
LSM2-212ENST00000477182 EIF4G2P78344 907 aaKnown RBP eCLIP16.15■□□□□ 0.18
LSM2-212ENST00000477182 SOX12O15370 315 aa16.14■□□□□ 0.17
LSM2-212ENST00000477182 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
LSM2-212ENST00000477182 CD2APQ9Y5K6 639 aa16.14■□□□□ 0.17
LSM2-212ENST00000477182 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
LSM2-212ENST00000477182 NLRP2Q9NX02 1062 aa16.13■□□□□ 0.17
LSM2-212ENST00000477182 CENPJQ9HC77 1338 aaPredicted RBP16.13■□□□□ 0.17
LSM2-212ENST00000477182 MSH5O43196 834 aa16.12■□□□□ 0.17
LSM2-212ENST00000477182 TTC21BQ7Z4L5 1316 aa16.12■□□□□ 0.17
LSM2-212ENST00000477182 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
LSM2-212ENST00000477182 NFAT5O94916 1531 aa16.11■□□□□ 0.17
LSM2-212ENST00000477182 KIF3CO14782 793 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms