RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
LSS-208ENST00000474319 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
LSS-208ENST00000474319 C8orf58Q8NAV2 365 aa13.36□□□□□ -0.27
LSS-208ENST00000474319 GLI2P10070 1586 aa13.36□□□□□ -0.27
LSS-208ENST00000474319 GAS2L2Q8NHY3 880 aa13.36□□□□□ -0.27
LSS-208ENST00000474319 MROH2AA6NES4 1674 aa13.36□□□□□ -0.27
LSS-208ENST00000474319 CLTCQ00610 1675 aaKnown RBP13.36□□□□□ -0.27
LSS-208ENST00000474319 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
LSS-208ENST00000474319 NUCB1Q02818 461 aa13.36□□□□□ -0.27
LSS-208ENST00000474319 SMC5Q8IY18 1101 aa13.35□□□□□ -0.27
LSS-208ENST00000474319 ZNF428Q96B54 188 aa13.35□□□□□ -0.27
LSS-208ENST00000474319 CAMSAP1Q5T5Y3 1602 aa13.35□□□□□ -0.27
LSS-208ENST00000474319 VWDEQ8N2E2 1590 aa13.35□□□□□ -0.27
LSS-208ENST00000474319 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
LSS-208ENST00000474319 CCDC27Q2M243 656 aa13.35□□□□□ -0.27
LSS-208ENST00000474319 DDX49Q9Y6V7 483 aaKnown RBP13.35□□□□□ -0.27
LSS-208ENST00000474319 MCTP1Q6DN14 999 aa13.34□□□□□ -0.27
LSS-208ENST00000474319 ANKLE2Q86XL3 938 aa13.34□□□□□ -0.27
LSS-208ENST00000474319 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
LSS-208ENST00000474319 ANKRD36BQ8N2N9 1353 aa13.34□□□□□ -0.27
LSS-208ENST00000474319 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
LSS-208ENST00000474319 PKP1Q13835 747 aa13.34□□□□□ -0.27
LSS-208ENST00000474319 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
LSS-208ENST00000474319 MBIPQ9NS73 344 aa13.34□□□□□ -0.27
LSS-208ENST00000474319 MCM10Q7L590 875 aa13.33□□□□□ -0.27
LSS-208ENST00000474319 AEBP1Q8IUX7 1158 aa13.33□□□□□ -0.28
LSS-208ENST00000474319 ERBB4Q15303 1308 aa13.33□□□□□ -0.28
LSS-208ENST00000474319 SIRT2Q8IXJ6 389 aa13.33□□□□□ -0.28
LSS-208ENST00000474319 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
LSS-208ENST00000474319 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 CCDC61Q9Y6R9 512 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 A2ML1A8K2U0 1454 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 COG3Q96JB2 828 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 ADGRB3O60242 1522 aa13.32□□□□□ -0.28
LSS-208ENST00000474319 VAMP4O75379 141 aa13.31□□□□□ -0.28
LSS-208ENST00000474319 CAVIN1Q6NZI2 390 aaKnown RBP13.31□□□□□ -0.28
LSS-208ENST00000474319 ZBTB7BO15156 539 aaPredicted RBP13.31□□□□□ -0.28
LSS-208ENST00000474319 MRE11P49959 708 aa13.31□□□□□ -0.28
LSS-208ENST00000474319 LMTK2Q8IWU2 1503 aa13.3□□□□□ -0.28
LSS-208ENST00000474319 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
LSS-208ENST00000474319 F6X3S4 739 aa13.3□□□□□ -0.28
LSS-208ENST00000474319 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
LSS-208ENST00000474319 KIF13AQ9H1H9 1805 aa13.3□□□□□ -0.28
LSS-208ENST00000474319 PKNOX2Q96KN3 472 aa13.3□□□□□ -0.28
LSS-208ENST00000474319 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
LSS-208ENST00000474319 IQSEC2Q5JU85 1478 aa13.29□□□□□ -0.28
LSS-208ENST00000474319 K7ELQ4 463 aaPredicted RBP13.29□□□□□ -0.28
LSS-208ENST00000474319 FOXO3O43524 673 aa13.29□□□□□ -0.28
LSS-208ENST00000474319 NLRP6P59044 892 aa13.29□□□□□ -0.28
LSS-208ENST00000474319 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
LSS-208ENST00000474319 PROSER2Q86WR7 435 aaPredicted RBP13.29□□□□□ -0.28
LSS-208ENST00000474319 MYOM2P54296 1465 aa13.29□□□□□ -0.28
LSS-208ENST00000474319 ESPNB1AK53 854 aa13.29□□□□□ -0.28
LSS-208ENST00000474319 ZGPATQ8N5A5 531 aaKnown RBP13.29□□□□□ -0.28
LSS-208ENST00000474319 MRPL50Q8N5N7 158 aaKnown RBP13.29□□□□□ -0.28
LSS-208ENST00000474319 RNF214Q8ND24 703 aa13.29□□□□□ -0.28
LSS-208ENST00000474319 FSD2A1L4K1 749 aa13.28□□□□□ -0.28
LSS-208ENST00000474319 GSPT1P15170 499 aaKnown RBP13.28□□□□□ -0.28
LSS-208ENST00000474319 KIF2CQ99661 725 aa13.28□□□□□ -0.28
LSS-208ENST00000474319 ROBO2Q9HCK4 1378 aa13.28□□□□□ -0.28
LSS-208ENST00000474319 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
LSS-208ENST00000474319 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
LSS-208ENST00000474319 ACEP12821 1306 aa13.28□□□□□ -0.28
LSS-208ENST00000474319 AAMPQ13685 434 aa13.28□□□□□ -0.28
LSS-208ENST00000474319 DDX17Q92841 729 aaKnown RBP13.28□□□□□ -0.28
LSS-208ENST00000474319 PIK3C2BO00750 1634 aa13.27□□□□□ -0.28
LSS-208ENST00000474319 PPIP5K1Q6PFW1 1433 aa13.27□□□□□ -0.28
LSS-208ENST00000474319 GOLGA6L22H0YM25 854 aa13.27□□□□□ -0.29
LSS-208ENST00000474319 PRPF40AO75400 957 aaKnown RBP13.27□□□□□ -0.29
LSS-208ENST00000474319 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
LSS-208ENST00000474319 FCHSD2O94868 740 aa13.27□□□□□ -0.29
LSS-208ENST00000474319 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
LSS-208ENST00000474319 BMP2KLQ5H9B9 411 aa13.26□□□□□ -0.29
LSS-208ENST00000474319 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
LSS-208ENST00000474319 CDC45O75419 566 aa13.26□□□□□ -0.29
LSS-208ENST00000474319 PSME1Q06323 249 aa13.26□□□□□ -0.29
LSS-208ENST00000474319 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
LSS-208ENST00000474319 NASPP49321 788 aaPredicted RBP13.26□□□□□ -0.29
LSS-208ENST00000474319 AMPHP49418 695 aa13.26□□□□□ -0.29
LSS-208ENST00000474319 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
LSS-208ENST00000474319 ANP32BQ92688 251 aaKnown RBP13.26□□□□□ -0.29
LSS-208ENST00000474319 MEIS3Q99687 375 aa13.26□□□□□ -0.29
LSS-208ENST00000474319 EXOC6BQ9Y2D4 811 aa13.26□□□□□ -0.29
LSS-208ENST00000474319 PRR36Q9H6K5 1346 aa13.25□□□□□ -0.29
LSS-208ENST00000474319 GNAI1P63096 354 aa13.25□□□□□ -0.29
LSS-208ENST00000474319 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
LSS-208ENST00000474319 TULP4Q9NRJ4 1543 aa13.25□□□□□ -0.29
LSS-208ENST00000474319 SHPRHQ149N8 1683 aa13.25□□□□□ -0.29
LSS-208ENST00000474319 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
LSS-208ENST00000474319 MAP4K4O95819 1239 aaPredicted RBP13.24□□□□□ -0.29
LSS-208ENST00000474319 RAB3GAP1Q15042 981 aa13.24□□□□□ -0.29
LSS-208ENST00000474319 RILPL2Q969X0 211 aa13.24□□□□□ -0.29
LSS-208ENST00000474319 MYO5BQ9ULV0 1848 aa13.24□□□□□ -0.29
LSS-208ENST00000474319 ARHGEF40Q8TER5 1519 aa13.24□□□□□ -0.29
LSS-208ENST00000474319 BAG4O95429 457 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms