RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 UCN2Q96RP3 112 aa10.73□□□□□ -0.69
CNOT9-206ENST00000473626 PDZRN3Q9UPQ7 1066 aa10.73□□□□□ -0.69
CNOT9-206ENST00000473626 SOX11P35716 441 aa10.72□□□□□ -0.69
CNOT9-206ENST00000473626 SNIP1Q8TAD8 396 aaKnown RBP10.72□□□□□ -0.69
CNOT9-206ENST00000473626 TOR4AQ9NXH8 423 aa10.72□□□□□ -0.69
CNOT9-206ENST00000473626 INTS6LQ5JSJ4 861 aaKnown RBP10.71□□□□□ -0.69
CNOT9-206ENST00000473626 ARID3AQ99856 593 aa10.71□□□□□ -0.69
CNOT9-206ENST00000473626 NR3C2P08235 984 aa10.7□□□□□ -0.7
CNOT9-206ENST00000473626 PRR20EP86478 221 aa10.7□□□□□ -0.7
CNOT9-206ENST00000473626 PRR20CP86479 221 aa10.7□□□□□ -0.7
CNOT9-206ENST00000473626 PRR20DP86480 221 aa10.7□□□□□ -0.7
CNOT9-206ENST00000473626 PRR20BP86481 221 aa10.7□□□□□ -0.7
CNOT9-206ENST00000473626 PRR20AP86496 221 aa10.7□□□□□ -0.7
CNOT9-206ENST00000473626 CCDC82Q8N4S0 544 aa10.7□□□□□ -0.7
CNOT9-206ENST00000473626 MAP4K5Q9Y4K4 846 aa10.7□□□□□ -0.7
CNOT9-206ENST00000473626 ADH1CP00326 375 aa10.69□□□□□ -0.7
CNOT9-206ENST00000473626 SMPD1P17405 629 aa10.69□□□□□ -0.7
CNOT9-206ENST00000473626 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
CNOT9-206ENST00000473626 PHTF2Q8N3S3 785 aa10.69□□□□□ -0.7
CNOT9-206ENST00000473626 ESPNB1AK53 854 aa10.68□□□□□ -0.7
CNOT9-206ENST00000473626 NBPF20Q3BBV1 942 aa10.68□□□□□ -0.7
CNOT9-206ENST00000473626 RNF135Q8IUD6 432 aa10.68□□□□□ -0.7
CNOT9-206ENST00000473626 MPNDQ8N594 471 aa10.68□□□□□ -0.7
CNOT9-206ENST00000473626 CCDC85AQ96PX6 553 aaPredicted RBP10.68□□□□□ -0.7
CNOT9-206ENST00000473626 TMPRSS4Q9NRS4 437 aa10.68□□□□□ -0.7
CNOT9-206ENST00000473626 WASF2Q9Y6W5 498 aa10.68□□□□□ -0.7
CNOT9-206ENST00000473626 MCCD1P59942 119 aaPredicted RBP10.67□□□□□ -0.7
CNOT9-206ENST00000473626 NNTQ13423 1086 aa10.67□□□□□ -0.7
CNOT9-206ENST00000473626 SLFNL1Q499Z3 407 aa10.67□□□□□ -0.7
CNOT9-206ENST00000473626 CDV3Q9UKY7 258 aaKnown RBP10.67□□□□□ -0.7
CNOT9-206ENST00000473626 ERVH48-1M5A8F1 160 aa10.66□□□□□ -0.7
CNOT9-206ENST00000473626 GFRA3O60609 400 aa10.66□□□□□ -0.7
CNOT9-206ENST00000473626 SKIP12755 728 aa10.66□□□□□ -0.7
CNOT9-206ENST00000473626 CDCA7Q9BWT1 371 aaPredicted RBP10.66□□□□□ -0.7
CNOT9-206ENST00000473626 TFIP11Q9UBB9 837 aaKnown RBP10.66□□□□□ -0.7
CNOT9-206ENST00000473626 DEPDC4Q8N2C3 294 aa10.65□□□□□ -0.7
CNOT9-206ENST00000473626 HPS1Q92902 700 aa10.65□□□□□ -0.7
CNOT9-206ENST00000473626 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
CNOT9-206ENST00000473626 FAM187AA6NFU0 413 aa10.64□□□□□ -0.71
CNOT9-206ENST00000473626 RFX1P22670 979 aa10.64□□□□□ -0.71
CNOT9-206ENST00000473626 PPP1R12CQ9BZL4 782 aa10.64□□□□□ -0.71
CNOT9-206ENST00000473626 PCDHB11Q9Y5F2 797 aa10.64□□□□□ -0.71
CNOT9-206ENST00000473626 NR5A1Q13285 461 aa10.63□□□□□ -0.71
CNOT9-206ENST00000473626 PPP1R26Q5T8A7 1209 aaPredicted RBP10.63□□□□□ -0.71
CNOT9-206ENST00000473626 CCDC116Q8IYX3 515 aa10.63□□□□□ -0.71
CNOT9-206ENST00000473626 PLPP7Q8NBV4 271 aa10.63□□□□□ -0.71
CNOT9-206ENST00000473626 ZNF592Q92610 1267 aa10.62□□□□□ -0.71
CNOT9-206ENST00000473626 CCDC97Q96F63 343 aaPredicted RBP10.62□□□□□ -0.71
CNOT9-206ENST00000473626 SCTRP47872 440 aa10.61□□□□□ -0.71
CNOT9-206ENST00000473626 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
CNOT9-206ENST00000473626 CFAP70Q5T0N1 1121 aa10.61□□□□□ -0.71
CNOT9-206ENST00000473626 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
CNOT9-206ENST00000473626 CYLDQ9NQC7 956 aa10.61□□□□□ -0.71
CNOT9-206ENST00000473626 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
CNOT9-206ENST00000473626 ATP9BO43861 1147 aa10.6□□□□□ -0.71
CNOT9-206ENST00000473626 LMOD1P29536 600 aaPredicted RBP10.6□□□□□ -0.71
CNOT9-206ENST00000473626 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
CNOT9-206ENST00000473626 TRAF7Q6Q0C0 670 aa10.6□□□□□ -0.71
CNOT9-206ENST00000473626 SEPT12Q8IYM1 358 aa10.6□□□□□ -0.71
CNOT9-206ENST00000473626 ZNF784Q8NCA9 323 aaPredicted RBP10.6□□□□□ -0.71
CNOT9-206ENST00000473626 ITPKCQ96DU7 683 aa10.6□□□□□ -0.71
CNOT9-206ENST00000473626 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
CNOT9-206ENST00000473626 DOLKQ9UPQ8 538 aa10.6□□□□□ -0.71
CNOT9-206ENST00000473626 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
CNOT9-206ENST00000473626 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
CNOT9-206ENST00000473626 SERPINA10Q9UK55 444 aa10.59□□□□□ -0.71
CNOT9-206ENST00000473626 MAFBQ9Y5Q3 323 aaPredicted RBP10.59□□□□□ -0.71
CNOT9-206ENST00000473626 CBLBQ13191 982 aa10.58□□□□□ -0.72
CNOT9-206ENST00000473626 NCOA4Q13772 614 aa10.58□□□□□ -0.72
CNOT9-206ENST00000473626 KLF16Q9BXK1 252 aaPredicted RBP10.58□□□□□ -0.72
CNOT9-206ENST00000473626 USP17L3A6NCW0 530 aa10.57□□□□□ -0.72
CNOT9-206ENST00000473626 USP17L4A6NCW7 530 aa10.57□□□□□ -0.72
CNOT9-206ENST00000473626 NRG2O14511 850 aaPredicted RBP10.57□□□□□ -0.72
CNOT9-206ENST00000473626 ZIC2O95409 532 aaPredicted RBP10.57□□□□□ -0.72
CNOT9-206ENST00000473626 TIMP2P16035 220 aa10.57□□□□□ -0.72
CNOT9-206ENST00000473626 ADD1P35611 737 aaKnown RBP10.57□□□□□ -0.72
CNOT9-206ENST00000473626 USP17L2Q6R6M4 530 aa10.57□□□□□ -0.72
CNOT9-206ENST00000473626 USP17L1Q7RTZ2 530 aa10.57□□□□□ -0.72
CNOT9-206ENST00000473626 IRX2Q9BZI1 471 aaPredicted RBP10.57□□□□□ -0.72
CNOT9-206ENST00000473626 LILRA1O75019 489 aa10.56□□□□□ -0.72
CNOT9-206ENST00000473626 DHX9Q08211 1270 aaKnown RBP10.56□□□□□ -0.72
CNOT9-206ENST00000473626 NFATC2IPQ8NCF5 419 aa10.56□□□□□ -0.72
CNOT9-206ENST00000473626 PKDCCQ504Y2 493 aa10.55□□□□□ -0.72
CNOT9-206ENST00000473626 EMILIN1Q9Y6C2 1016 aa10.55□□□□□ -0.72
CNOT9-206ENST00000473626 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.54□□□□□ -0.72
CNOT9-206ENST00000473626 MAP7D1Q3KQU3 841 aa10.54□□□□□ -0.72
CNOT9-206ENST00000473626 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
CNOT9-206ENST00000473626 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
CNOT9-206ENST00000473626 ERVK-9P63128 1117 aa10.52□□□□□ -0.73
CNOT9-206ENST00000473626 MYT1Q01538 1121 aa10.52□□□□□ -0.73
CNOT9-206ENST00000473626 EML3Q32P44 896 aa10.52□□□□□ -0.73
CNOT9-206ENST00000473626 CC2D2BQ6DHV5 1058 aa10.52□□□□□ -0.73
CNOT9-206ENST00000473626 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
CNOT9-206ENST00000473626 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
CNOT9-206ENST00000473626 ST8SIA5O15466 376 aa10.51□□□□□ -0.73
CNOT9-206ENST00000473626 CAPN5O15484 640 aaPredicted RBP10.51□□□□□ -0.73
CNOT9-206ENST00000473626 DGAT1O75907 488 aa10.51□□□□□ -0.73
CNOT9-206ENST00000473626 KANK4Q5T7N3 995 aaPredicted RBP10.51□□□□□ -0.73
CNOT9-206ENST00000473626 PLEKHM2Q8IWE5 1019 aa10.51□□□□□ -0.73
CNOT9-206ENST00000473626 MKRN1Q9UHC7 482 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms