RNA–Protein interactions for RNA: ENST00000471555.5

ATP11A-210, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 1 (best)

Gene ATP11A, Length 5,786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-210ENST00000471555 RNF214Q8ND24 703 aa13.34□□□□□ -0.27
ATP11A-210ENST00000471555 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
ATP11A-210ENST00000471555 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
ATP11A-210ENST00000471555 IQCEQ6IPM2 695 aa13.33□□□□□ -0.28
ATP11A-210ENST00000471555 CCT4P50991 539 aaKnown RBP13.33□□□□□ -0.28
ATP11A-210ENST00000471555 GBP2P32456 591 aaPredicted RBP13.32□□□□□ -0.28
ATP11A-210ENST00000471555 TWISTNBQ3B726 338 aaPredicted RBP13.32□□□□□ -0.28
ATP11A-210ENST00000471555 CNTLNQ9NXG0 1405 aa13.32□□□□□ -0.28
ATP11A-210ENST00000471555 HMGN5P82970 282 aaKnown RBP13.32□□□□□ -0.28
ATP11A-210ENST00000471555 CAVIN1Q6NZI2 390 aaKnown RBP13.32□□□□□ -0.28
ATP11A-210ENST00000471555 RRBP1Q9P2E9 1410 aaKnown RBP13.32□□□□□ -0.28
ATP11A-210ENST00000471555 ERLIN1O75477 346 aa13.32□□□□□ -0.28
ATP11A-210ENST00000471555 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
ATP11A-210ENST00000471555 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
ATP11A-210ENST00000471555 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATP11A-210ENST00000471555 HDGFL1Q5TGJ6 251 aa13.32□□□□□ -0.28
ATP11A-210ENST00000471555 FIBPO43427 364 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 KIAA0754O94854 1291 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 NUP133Q8WUM0 1156 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 ZNF76P36508 570 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 ZSCAN29Q8IWY8 852 aaPredicted RBP13.31□□□□□ -0.28
ATP11A-210ENST00000471555 TMOD2Q9NZR1 351 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 MTHFSP49914 203 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 TXNDC2Q86VQ3 553 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
ATP11A-210ENST00000471555 CTNNA3Q9UI47 895 aa13.31□□□□□ -0.28
ATP11A-210ENST00000471555 WDHD1O75717 1129 aaPredicted RBP13.3□□□□□ -0.28
ATP11A-210ENST00000471555 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
ATP11A-210ENST00000471555 CCDC97Q96F63 343 aaPredicted RBP13.3□□□□□ -0.28
ATP11A-210ENST00000471555 BCL11BQ9C0K0 894 aaPredicted RBP13.3□□□□□ -0.28
ATP11A-210ENST00000471555 SEPT11Q9NVA2 429 aaKnown RBP13.3□□□□□ -0.28
ATP11A-210ENST00000471555 SCAPERQ9BY12 1400 aa13.3□□□□□ -0.28
ATP11A-210ENST00000471555 ME1P48163 572 aa13.3□□□□□ -0.28
ATP11A-210ENST00000471555 WASF1Q92558 559 aa13.3□□□□□ -0.28
ATP11A-210ENST00000471555 UBAC1Q9BSL1 405 aa13.3□□□□□ -0.28
ATP11A-210ENST00000471555 PRPF40AO75400 957 aaKnown RBP13.3□□□□□ -0.28
ATP11A-210ENST00000471555 SRCIN1Q9C0H9 1055 aa13.3□□□□□ -0.28
ATP11A-210ENST00000471555 JAKMIP3Q5VZ66 844 aa13.29□□□□□ -0.28
ATP11A-210ENST00000471555 PLCD4Q9BRC7 762 aa13.29□□□□□ -0.28
ATP11A-210ENST00000471555 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
ATP11A-210ENST00000471555 EIF3JO75822 258 aaKnown RBP13.29□□□□□ -0.28
ATP11A-210ENST00000471555 TCP11L2Q8N4U5 519 aa13.29□□□□□ -0.28
ATP11A-210ENST00000471555 TNMDQ9H2S6 317 aa13.29□□□□□ -0.28
ATP11A-210ENST00000471555 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
ATP11A-210ENST00000471555 SSBP05455 408 aaKnown RBP eCLIP13.29□□□□□ -0.28
ATP11A-210ENST00000471555 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
ATP11A-210ENST00000471555 TRAK2O60296 914 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 CETN2P41208 172 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 KRT85P78386 507 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 CCDC112Q8NEF3 446 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 TNIP1Q15025 636 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 TDO2P48775 406 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
ATP11A-210ENST00000471555 TAX1BP1Q86VP1 789 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 CCDC7Q96M83 1385 aa13.28□□□□□ -0.28
ATP11A-210ENST00000471555 DDX54Q8TDD1 881 aaKnown RBP13.28□□□□□ -0.28
ATP11A-210ENST00000471555 PPP1R12BO60237 982 aaPredicted RBP13.27□□□□□ -0.28
ATP11A-210ENST00000471555 SLC4A2P04920 1241 aa13.27□□□□□ -0.28
ATP11A-210ENST00000471555 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.28
ATP11A-210ENST00000471555 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.28
ATP11A-210ENST00000471555 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.28
ATP11A-210ENST00000471555 TMEM132EQ6IEE7 984 aa13.27□□□□□ -0.28
ATP11A-210ENST00000471555 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.28
ATP11A-210ENST00000471555 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.28
ATP11A-210ENST00000471555 ZNF287Q9HBT7 754 aa13.27□□□□□ -0.28
ATP11A-210ENST00000471555 TAF4BQ92750 862 aa13.27□□□□□ -0.29
ATP11A-210ENST00000471555 EXOSC9Q06265 439 aaKnown RBP13.26□□□□□ -0.29
ATP11A-210ENST00000471555 STK3Q13188 491 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 NFKBIBQ15653 356 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 CEP57L1Q8IYX8 460 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 RAI14Q9P0K7 980 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 CUX1P39880 1505 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
ATP11A-210ENST00000471555 STK11IPQ8N1F8 1099 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 SIL1Q9H173 461 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 KRT32Q14532 448 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 PPP4R3AQ6IN85 833 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 ZSCAN31Q96LW9 406 aaPredicted RBP13.26□□□□□ -0.29
ATP11A-210ENST00000471555 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 PDIA4P13667 645 aaKnown RBP13.26□□□□□ -0.29
ATP11A-210ENST00000471555 CEP131Q9UPN4 1083 aa13.26□□□□□ -0.29
ATP11A-210ENST00000471555 CFAP45Q9UL16 551 aa13.25□□□□□ -0.29
ATP11A-210ENST00000471555 FKBP4Q02790 459 aaKnown RBP eCLIP13.25□□□□□ -0.29
ATP11A-210ENST00000471555 BLOC1S2Q6QNY1 142 aa13.25□□□□□ -0.29
ATP11A-210ENST00000471555 LARP1BQ659C4 914 aaKnown RBP13.24□□□□□ -0.29
ATP11A-210ENST00000471555 SPC24Q8NBT2 197 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 CCDC91Q7Z6B0 441 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 CENPHQ9H3R5 247 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
ATP11A-210ENST00000471555 LRP2BPQ9P2M1 347 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 SMTNL1A8MU46 457 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 PDE3AQ14432 1141 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 HSP90AB3PQ58FF7 597 aa13.24□□□□□ -0.29
ATP11A-210ENST00000471555 AACSQ86V21 672 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms