RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 STK32BQ9NY57 414 aa18.17■□□□□ 0.5
HIGD1A-205ENST00000470543 SLIT3O75094 1523 aa18.17■□□□□ 0.5
HIGD1A-205ENST00000470543 BRD4O60885 1362 aaPredicted RBP18.17■□□□□ 0.5
HIGD1A-205ENST00000470543 CHD4Q14839 1912 aa18.15■□□□□ 0.5
HIGD1A-205ENST00000470543 USP6P35125 1406 aa18.15■□□□□ 0.5
HIGD1A-205ENST00000470543 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.49
HIGD1A-205ENST00000470543 CDCA7Q9BWT1 371 aaPredicted RBP18.14■□□□□ 0.49
HIGD1A-205ENST00000470543 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
HIGD1A-205ENST00000470543 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.49
HIGD1A-205ENST00000470543 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
HIGD1A-205ENST00000470543 PIK3C2AO00443 1686 aa18.13■□□□□ 0.49
HIGD1A-205ENST00000470543 ZNF784Q8NCA9 323 aaPredicted RBP18.13■□□□□ 0.49
HIGD1A-205ENST00000470543 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
HIGD1A-205ENST00000470543 RGPD5Q99666 1765 aa18.12■□□□□ 0.49
HIGD1A-205ENST00000470543 PTF1AQ7RTS3 328 aa18.12■□□□□ 0.49
HIGD1A-205ENST00000470543 PDGFDQ9GZP0 370 aaPredicted RBP18.12■□□□□ 0.49
HIGD1A-205ENST00000470543 CPSF1Q10570 1443 aaKnown RBP18.12■□□□□ 0.49
HIGD1A-205ENST00000470543 COL18A1P39060 1754 aa18.12■□□□□ 0.49
HIGD1A-205ENST00000470543 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
HIGD1A-205ENST00000470543 TXNRD1Q16881 649 aa18.1■□□□□ 0.49
HIGD1A-205ENST00000470543 MARCH10Q8NA82 808 aaPredicted RBP18.1■□□□□ 0.49
HIGD1A-205ENST00000470543 FHDC1Q9C0D6 1143 aaPredicted RBP18.1■□□□□ 0.49
HIGD1A-205ENST00000470543 BCL9O00512 1426 aa18.09■□□□□ 0.49
HIGD1A-205ENST00000470543 SOX12O15370 315 aa18.09■□□□□ 0.49
HIGD1A-205ENST00000470543 PTGER2P43116 358 aa18.09■□□□□ 0.49
HIGD1A-205ENST00000470543 CABP1Q9NZU7 370 aa18.09■□□□□ 0.49
HIGD1A-205ENST00000470543 SLC15A2Q16348 729 aa18.08■□□□□ 0.48
HIGD1A-205ENST00000470543 MTFR1LQ9H019 292 aa18.08■□□□□ 0.48
HIGD1A-205ENST00000470543 NHSQ6T4R5 1651 aa18.08■□□□□ 0.48
HIGD1A-205ENST00000470543 NBPF1Q3BBV0 1214 aa18.07■□□□□ 0.48
HIGD1A-205ENST00000470543 PROM2Q8N271 834 aa18.07■□□□□ 0.48
HIGD1A-205ENST00000470543 SYT17Q9BSW7 474 aa18.07■□□□□ 0.48
HIGD1A-205ENST00000470543 TNS2Q63HR2 1409 aa18.06■□□□□ 0.48
HIGD1A-205ENST00000470543 EXOC5O00471 708 aa18.06■□□□□ 0.48
HIGD1A-205ENST00000470543 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
HIGD1A-205ENST00000470543 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
HIGD1A-205ENST00000470543 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
HIGD1A-205ENST00000470543 AXIN2Q9Y2T1 843 aa18.05■□□□□ 0.48
HIGD1A-205ENST00000470543 KAT6BQ8WYB5 2073 aa18.05■□□□□ 0.48
HIGD1A-205ENST00000470543 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
HIGD1A-205ENST00000470543 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
HIGD1A-205ENST00000470543 ARXQ96QS3 562 aa18.03■□□□□ 0.48
HIGD1A-205ENST00000470543 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
HIGD1A-205ENST00000470543 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
HIGD1A-205ENST00000470543 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
HIGD1A-205ENST00000470543 ABCC6O95255 1503 aa18.02■□□□□ 0.47
HIGD1A-205ENST00000470543 BTAF1O14981 1849 aa18.01■□□□□ 0.47
HIGD1A-205ENST00000470543 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
HIGD1A-205ENST00000470543 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
HIGD1A-205ENST00000470543 GPR162Q16538 588 aa18■□□□□ 0.47
HIGD1A-205ENST00000470543 PAPPAQ13219 1627 aa18■□□□□ 0.47
HIGD1A-205ENST00000470543 TTC21BQ7Z4L5 1316 aa17.99■□□□□ 0.47
HIGD1A-205ENST00000470543 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
HIGD1A-205ENST00000470543 NFAT5O94916 1531 aa17.99■□□□□ 0.47
HIGD1A-205ENST00000470543 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
HIGD1A-205ENST00000470543 ZNF692Q9BU19 519 aaPredicted RBP17.98■□□□□ 0.47
HIGD1A-205ENST00000470543 LTN1O94822 1766 aa17.97■□□□□ 0.47
HIGD1A-205ENST00000470543 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
HIGD1A-205ENST00000470543 SGIP1Q9BQI5 828 aa17.97■□□□□ 0.47
HIGD1A-205ENST00000470543 NLRP2Q9NX02 1062 aa17.97■□□□□ 0.47
HIGD1A-205ENST00000470543 GIGYF1O75420 1035 aaPredicted RBP17.96■□□□□ 0.47
HIGD1A-205ENST00000470543 UTRNP46939 3433 aa17.96■□□□□ 0.47
HIGD1A-205ENST00000470543 MON2Q7Z3U7 1717 aa17.95■□□□□ 0.46
HIGD1A-205ENST00000470543 KTN1Q86UP2 1357 aaKnown RBP17.95■□□□□ 0.46
HIGD1A-205ENST00000470543 POLD1P28340 1107 aa17.95■□□□□ 0.46
HIGD1A-205ENST00000470543 IL2RBP14784 551 aa17.94■□□□□ 0.46
HIGD1A-205ENST00000470543 QSER1Q2KHR3 1735 aa17.94■□□□□ 0.46
HIGD1A-205ENST00000470543 ZNF827Q17R98 1081 aa17.93■□□□□ 0.46
HIGD1A-205ENST00000470543 ERBB3P21860 1342 aa17.92■□□□□ 0.46
HIGD1A-205ENST00000470543 USP54Q70EL1 1684 aa17.9■□□□□ 0.46
HIGD1A-205ENST00000470543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.9■□□□□ 0.46
HIGD1A-205ENST00000470543 ROCK2O75116 1388 aaKnown RBP17.9■□□□□ 0.46
HIGD1A-205ENST00000470543 TUBGCP6Q96RT7 1819 aa17.89■□□□□ 0.45
HIGD1A-205ENST00000470543 SLC16A10Q8TF71 515 aa17.89■□□□□ 0.45
HIGD1A-205ENST00000470543 ANKRD24Q8TF21 1146 aa17.88■□□□□ 0.45
HIGD1A-205ENST00000470543 FAM208AQ9UK61 1670 aaKnown RBP17.87■□□□□ 0.45
HIGD1A-205ENST00000470543 SLC27A3Q5K4L6 730 aa17.87■□□□□ 0.45
HIGD1A-205ENST00000470543 LRRC4BQ9NT99 713 aa17.87■□□□□ 0.45
HIGD1A-205ENST00000470543 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
HIGD1A-205ENST00000470543 DOT1LQ8TEK3 1739 aa17.86■□□□□ 0.45
HIGD1A-205ENST00000470543 SYTL4Q96C24 671 aaPredicted RBP17.86■□□□□ 0.45
HIGD1A-205ENST00000470543 COL24A1Q17RW2 1714 aa17.85■□□□□ 0.45
HIGD1A-205ENST00000470543 USP31Q70CQ4 1352 aa17.85■□□□□ 0.45
HIGD1A-205ENST00000470543 DDX54Q8TDD1 881 aaKnown RBP17.85■□□□□ 0.45
HIGD1A-205ENST00000470543 AKT1S1Q96B36 256 aa17.85■□□□□ 0.45
HIGD1A-205ENST00000470543 SHANK3Q9BYB0 1731 aa17.85■□□□□ 0.45
HIGD1A-205ENST00000470543 PNPLA7Q6ZV29 1317 aa17.84■□□□□ 0.45
HIGD1A-205ENST00000470543 IFFO2Q5TF58 517 aa17.84■□□□□ 0.45
HIGD1A-205ENST00000470543 NME9Q86XW9 330 aa17.84■□□□□ 0.45
HIGD1A-205ENST00000470543 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
HIGD1A-205ENST00000470543 TMC1Q8TDI8 760 aa17.83■□□□□ 0.44
HIGD1A-205ENST00000470543 L3MBTL2Q969R5 705 aa17.83■□□□□ 0.44
HIGD1A-205ENST00000470543 NLGN2Q8NFZ4 835 aa17.82■□□□□ 0.44
HIGD1A-205ENST00000470543 LY75O60449 1722 aa17.81■□□□□ 0.44
HIGD1A-205ENST00000470543 GRIN3BO60391 1043 aa17.81■□□□□ 0.44
HIGD1A-205ENST00000470543 LTV1Q96GA3 475 aaPredicted RBP17.81■□□□□ 0.44
HIGD1A-205ENST00000470543 SBNO2Q9Y2G9 1366 aa17.79■□□□□ 0.44
HIGD1A-205ENST00000470543 KCNQ4P56696 695 aa17.79■□□□□ 0.44
HIGD1A-205ENST00000470543 EDC4Q6P2E9 1401 aaKnown RBP17.79■□□□□ 0.44
HIGD1A-205ENST00000470543 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms