RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
BRAT1-203ENST00000467558 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
BRAT1-203ENST00000467558 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
BRAT1-203ENST00000467558 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
BRAT1-203ENST00000467558 APPP05067 770 aa16.75■□□□□ 0.27
BRAT1-203ENST00000467558 C20orf194Q5TEA3 1177 aa16.75■□□□□ 0.27
BRAT1-203ENST00000467558 LRRCC1Q9C099 1032 aa16.75■□□□□ 0.27
BRAT1-203ENST00000467558 SYNE3Q6ZMZ3 975 aa16.74■□□□□ 0.27
BRAT1-203ENST00000467558 VPS37DQ86XT2 251 aa16.74■□□□□ 0.27
BRAT1-203ENST00000467558 TRDNQ13061 729 aa16.74■□□□□ 0.27
BRAT1-203ENST00000467558 GSE1Q14687 1217 aa16.74■□□□□ 0.27
BRAT1-203ENST00000467558 LRPPRCP42704 1394 aaKnown RBP16.74■□□□□ 0.27
BRAT1-203ENST00000467558 TAF7Q15545 349 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-203ENST00000467558 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
BRAT1-203ENST00000467558 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
BRAT1-203ENST00000467558 IL16Q14005 1332 aa16.73■□□□□ 0.27
BRAT1-203ENST00000467558 RBM33Q96EV2 1170 aaKnown RBP16.73■□□□□ 0.27
BRAT1-203ENST00000467558 PER1O15534 1290 aaPredicted RBP16.72■□□□□ 0.27
BRAT1-203ENST00000467558 FSD1Q9BTV5 496 aa16.72■□□□□ 0.27
BRAT1-203ENST00000467558 MSH5O43196 834 aa16.72■□□□□ 0.27
BRAT1-203ENST00000467558 TPM4P67936 248 aa16.72■□□□□ 0.27
BRAT1-203ENST00000467558 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
BRAT1-203ENST00000467558 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-203ENST00000467558 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-203ENST00000467558 POLR3AO14802 1390 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-203ENST00000467558 ABCA8O94911 1581 aa16.71■□□□□ 0.27
BRAT1-203ENST00000467558 TTC21AQ8NDW8 1320 aa16.71■□□□□ 0.27
BRAT1-203ENST00000467558 HIP1O00291 1037 aa16.71■□□□□ 0.26
BRAT1-203ENST00000467558 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.26
BRAT1-203ENST00000467558 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.26
BRAT1-203ENST00000467558 CPLX1O14810 134 aa16.7■□□□□ 0.26
BRAT1-203ENST00000467558 NOL10Q9BSC4 688 aaKnown RBP16.7■□□□□ 0.26
BRAT1-203ENST00000467558 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
BRAT1-203ENST00000467558 MYL6BP14649 208 aa16.7■□□□□ 0.26
BRAT1-203ENST00000467558 ZMYM3Q14202 1370 aa16.7■□□□□ 0.26
BRAT1-203ENST00000467558 RABEP1Q15276 862 aa16.69■□□□□ 0.26
BRAT1-203ENST00000467558 ARHGEF5Q12774 1597 aa16.69■□□□□ 0.26
BRAT1-203ENST00000467558 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
BRAT1-203ENST00000467558 WASHC4Q2M389 1173 aa16.69■□□□□ 0.26
BRAT1-203ENST00000467558 MCM2P49736 904 aa16.68■□□□□ 0.26
BRAT1-203ENST00000467558 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-203ENST00000467558 AMOTL1Q8IY63 956 aa16.68■□□□□ 0.26
BRAT1-203ENST00000467558 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
BRAT1-203ENST00000467558 PSMA5P28066 241 aa16.68■□□□□ 0.26
BRAT1-203ENST00000467558 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
BRAT1-203ENST00000467558 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
BRAT1-203ENST00000467558 PPIP5K1Q6PFW1 1433 aa16.68■□□□□ 0.26
BRAT1-203ENST00000467558 COL17A1Q9UMD9 1497 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-203ENST00000467558 KRT28Q7Z3Y7 464 aa16.67■□□□□ 0.26
BRAT1-203ENST00000467558 KDM6BO15054 1643 aa16.67■□□□□ 0.26
BRAT1-203ENST00000467558 TRIM27P14373 513 aa16.67■□□□□ 0.26
BRAT1-203ENST00000467558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.67■□□□□ 0.26
BRAT1-203ENST00000467558 NEK4P51957 841 aa16.67■□□□□ 0.26
BRAT1-203ENST00000467558 CCDC27Q2M243 656 aa16.67■□□□□ 0.26
BRAT1-203ENST00000467558 CADPS2Q86UW7 1296 aa16.67■□□□□ 0.26
BRAT1-203ENST00000467558 RALYLQ86SE5 291 aaKnown RBP16.67■□□□□ 0.26
BRAT1-203ENST00000467558 PIK3C2GO75747 1445 aa16.66■□□□□ 0.26
BRAT1-203ENST00000467558 FBLN1P23142 703 aa16.66■□□□□ 0.26
BRAT1-203ENST00000467558 NFKBIBQ15653 356 aa16.66■□□□□ 0.26
BRAT1-203ENST00000467558 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
BRAT1-203ENST00000467558 ATP10AO60312 1499 aa16.66■□□□□ 0.26
BRAT1-203ENST00000467558 GCC2Q8IWJ2 1684 aa16.66■□□□□ 0.26
BRAT1-203ENST00000467558 NEO1Q92859 1461 aa16.66■□□□□ 0.26
BRAT1-203ENST00000467558 VPS37CA5D8V6 355 aaPredicted RBP16.65■□□□□ 0.26
BRAT1-203ENST00000467558 TRIM29Q14134 588 aa16.65■□□□□ 0.26
BRAT1-203ENST00000467558 HSP90AB2PQ58FF8 381 aa16.65■□□□□ 0.26
BRAT1-203ENST00000467558 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
BRAT1-203ENST00000467558 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
BRAT1-203ENST00000467558 DNAJC2Q99543 621 aaKnown RBP16.64■□□□□ 0.25
BRAT1-203ENST00000467558 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
BRAT1-203ENST00000467558 NPC1L1Q9UHC9 1359 aa16.63■□□□□ 0.25
BRAT1-203ENST00000467558 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
BRAT1-203ENST00000467558 PTPRCP08575 1304 aa16.63■□□□□ 0.25
BRAT1-203ENST00000467558 SIL1Q9H173 461 aa16.63■□□□□ 0.25
BRAT1-203ENST00000467558 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
BRAT1-203ENST00000467558 NUTM2BA6NNL0 878 aaPredicted RBP16.63■□□□□ 0.25
BRAT1-203ENST00000467558 NUTM2EB1AL46 878 aaPredicted RBP16.63■□□□□ 0.25
BRAT1-203ENST00000467558 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
BRAT1-203ENST00000467558 NUTM2AQ8IVF1 878 aaPredicted RBP16.63■□□□□ 0.25
BRAT1-203ENST00000467558 FAM177BA6PVY3 158 aa16.63■□□□□ 0.25
BRAT1-203ENST00000467558 TBX22Q9Y458 520 aa16.63■□□□□ 0.25
BRAT1-203ENST00000467558 ERICH2A1L162 156 aa16.62■□□□□ 0.25
BRAT1-203ENST00000467558 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
BRAT1-203ENST00000467558 EXOC6BQ9Y2D4 811 aa16.62■□□□□ 0.25
BRAT1-203ENST00000467558 CCDC158Q5M9N0 1113 aa16.62■□□□□ 0.25
BRAT1-203ENST00000467558 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
BRAT1-203ENST00000467558 DBF4Q9UBU7 674 aaPredicted RBP16.61■□□□□ 0.25
BRAT1-203ENST00000467558 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
BRAT1-203ENST00000467558 NFXL1Q6ZNB6 911 aa16.61■□□□□ 0.25
BRAT1-203ENST00000467558 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
BRAT1-203ENST00000467558 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
BRAT1-203ENST00000467558 A0A1W2PP64 1363 aa16.61■□□□□ 0.25
BRAT1-203ENST00000467558 NPATQ14207 1427 aa16.61■□□□□ 0.25
BRAT1-203ENST00000467558 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
BRAT1-203ENST00000467558 KIF1BPQ96EK5 621 aa16.6■□□□□ 0.25
BRAT1-203ENST00000467558 FLIIQ13045 1269 aa16.6■□□□□ 0.25
BRAT1-203ENST00000467558 STARD3NLO95772 234 aa16.59■□□□□ 0.25
BRAT1-203ENST00000467558 AACSQ86V21 672 aa16.59■□□□□ 0.25
BRAT1-203ENST00000467558 ARHGAP45Q92619 1136 aa16.59■□□□□ 0.25
BRAT1-203ENST00000467558 F6X3S4 739 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms