RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 HIP1O00291 1037 aa15.43■□□□□ 0.06
NUP58-206ENST00000463407 ABCC5O15440 1437 aa15.43■□□□□ 0.06
NUP58-206ENST00000463407 USHBP1Q8N6Y0 703 aa15.43■□□□□ 0.06
NUP58-206ENST00000463407 FAM135AQ9P2D6 1515 aa15.43■□□□□ 0.06
NUP58-206ENST00000463407 ZPR1O75312 459 aa15.43■□□□□ 0.06
NUP58-206ENST00000463407 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
NUP58-206ENST00000463407 LRPPRCP42704 1394 aaKnown RBP15.42■□□□□ 0.06
NUP58-206ENST00000463407 PTCD1O75127 700 aaKnown RBP15.42■□□□□ 0.06
NUP58-206ENST00000463407 ARID3AQ99856 593 aa15.42■□□□□ 0.06
NUP58-206ENST00000463407 IDI1Q13907 227 aa15.42■□□□□ 0.06
NUP58-206ENST00000463407 FCHSD2O94868 740 aa15.41■□□□□ 0.06
NUP58-206ENST00000463407 BCAR3O75815 825 aa15.41■□□□□ 0.06
NUP58-206ENST00000463407 WDR63Q8IWG1 891 aa15.41■□□□□ 0.06
NUP58-206ENST00000463407 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
NUP58-206ENST00000463407 CHMP5Q9NZZ3 219 aa15.41■□□□□ 0.06
NUP58-206ENST00000463407 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
NUP58-206ENST00000463407 CCDC85AQ96PX6 553 aaPredicted RBP15.4■□□□□ 0.06
NUP58-206ENST00000463407 MIS18AQ9NYP9 233 aa15.4■□□□□ 0.06
NUP58-206ENST00000463407 ZNF652Q9Y2D9 606 aa15.4■□□□□ 0.06
NUP58-206ENST00000463407 MPRIPQ6WCQ1 1025 aa15.4■□□□□ 0.06
NUP58-206ENST00000463407 NME9Q86XW9 330 aa15.4■□□□□ 0.06
NUP58-206ENST00000463407 WASLO00401 505 aaPredicted RBP15.39■□□□□ 0.05
NUP58-206ENST00000463407 R3HCC1Q9Y3T6 440 aaKnown RBP15.39■□□□□ 0.05
NUP58-206ENST00000463407 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
NUP58-206ENST00000463407 NFE2L2Q16236 605 aa15.39■□□□□ 0.05
NUP58-206ENST00000463407 ZSCAN29Q8IWY8 852 aaPredicted RBP15.39■□□□□ 0.05
NUP58-206ENST00000463407 KRI1Q8N9T8 703 aaKnown RBP15.39■□□□□ 0.05
NUP58-206ENST00000463407 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
NUP58-206ENST00000463407 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
NUP58-206ENST00000463407 NACAP1Q9BZK3 213 aa15.38■□□□□ 0.05
NUP58-206ENST00000463407 LRRCC1Q9C099 1032 aa15.38■□□□□ 0.05
NUP58-206ENST00000463407 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
NUP58-206ENST00000463407 TMEM132AQ24JP5 1023 aa15.38■□□□□ 0.05
NUP58-206ENST00000463407 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
NUP58-206ENST00000463407 NUCB2P80303 420 aa15.38■□□□□ 0.05
NUP58-206ENST00000463407 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
NUP58-206ENST00000463407 BIVM-ERCC5R4GMW8 1640 aa15.38■□□□□ 0.05
NUP58-206ENST00000463407 PDE3AQ14432 1141 aa15.37■□□□□ 0.05
NUP58-206ENST00000463407 ADGRF5Q8IZF2 1346 aa15.37■□□□□ 0.05
NUP58-206ENST00000463407 MCM10Q7L590 875 aa15.37■□□□□ 0.05
NUP58-206ENST00000463407 EXOC5O00471 708 aa15.37■□□□□ 0.05
NUP58-206ENST00000463407 CCDC73Q6ZRK6 1079 aa15.37■□□□□ 0.05
NUP58-206ENST00000463407 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
NUP58-206ENST00000463407 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.36■□□□□ 0.05
NUP58-206ENST00000463407 AMOTQ4VCS5 1084 aa15.36■□□□□ 0.05
NUP58-206ENST00000463407 TNRQ92752 1358 aa15.36■□□□□ 0.05
NUP58-206ENST00000463407 AACSQ86V21 672 aa15.36■□□□□ 0.05
NUP58-206ENST00000463407 GOLGA6L1Q8N7Z2 621 aa15.36■□□□□ 0.05
NUP58-206ENST00000463407 RAI14Q9P0K7 980 aa15.36■□□□□ 0.05
NUP58-206ENST00000463407 CT47B1P0C2W7 299 aaPredicted RBP15.36■□□□□ 0.05
NUP58-206ENST00000463407 CEP126Q9P2H0 1117 aa15.36■□□□□ 0.05
NUP58-206ENST00000463407 IPO7O95373 1038 aaKnown RBP15.35■□□□□ 0.05
NUP58-206ENST00000463407 ATP2B1P20020 1258 aa15.35■□□□□ 0.05
NUP58-206ENST00000463407 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
NUP58-206ENST00000463407 SASS6Q6UVJ0 657 aa15.35■□□□□ 0.05
NUP58-206ENST00000463407 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
NUP58-206ENST00000463407 GSE1Q14687 1217 aa15.34■□□□□ 0.05
NUP58-206ENST00000463407 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
NUP58-206ENST00000463407 NOS1P29475 1434 aa15.34■□□□□ 0.05
NUP58-206ENST00000463407 TMPOP42166 694 aaKnown RBP15.34■□□□□ 0.05
NUP58-206ENST00000463407 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
NUP58-206ENST00000463407 UBAP1LF5GYI3 381 aa15.33■□□□□ 0.05
NUP58-206ENST00000463407 CDK5RAP3Q96JB5 506 aa15.33■□□□□ 0.05
NUP58-206ENST00000463407 WWC2Q6AWC2 1192 aa15.33■□□□□ 0.04
NUP58-206ENST00000463407 ATF7IPQ6VMQ6 1270 aa15.33■□□□□ 0.04
NUP58-206ENST00000463407 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.04
NUP58-206ENST00000463407 LRP2BPQ9P2M1 347 aa15.33■□□□□ 0.04
NUP58-206ENST00000463407 MSH6P52701 1360 aa15.33■□□□□ 0.04
NUP58-206ENST00000463407 EPS15P42566 896 aa15.33■□□□□ 0.04
NUP58-206ENST00000463407 ASXL2Q76L83 1435 aa15.33■□□□□ 0.04
NUP58-206ENST00000463407 DCTN1Q14203 1278 aa15.32■□□□□ 0.04
NUP58-206ENST00000463407 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
NUP58-206ENST00000463407 DHX29Q7Z478 1369 aaKnown RBP15.32■□□□□ 0.04
NUP58-206ENST00000463407 CCDC69A6NI79 296 aa15.32■□□□□ 0.04
NUP58-206ENST00000463407 MAP3K1Q13233 1512 aa15.32■□□□□ 0.04
NUP58-206ENST00000463407 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
NUP58-206ENST00000463407 TAF7Q15545 349 aaPredicted RBP15.32■□□□□ 0.04
NUP58-206ENST00000463407 MYD88Q99836 296 aa15.32■□□□□ 0.04
NUP58-206ENST00000463407 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
NUP58-206ENST00000463407 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
NUP58-206ENST00000463407 TOM1O60784 492 aa15.31■□□□□ 0.04
NUP58-206ENST00000463407 METTL24Q5JXM2 366 aa15.31■□□□□ 0.04
NUP58-206ENST00000463407 EMILIN1Q9Y6C2 1016 aa15.31■□□□□ 0.04
NUP58-206ENST00000463407 TMOD2Q9NZR1 351 aa15.31■□□□□ 0.04
NUP58-206ENST00000463407 ANKIB1Q9P2G1 1089 aa15.31■□□□□ 0.04
NUP58-206ENST00000463407 TDO2P48775 406 aa15.3■□□□□ 0.04
NUP58-206ENST00000463407 NUP133Q8WUM0 1156 aa15.3■□□□□ 0.04
NUP58-206ENST00000463407 OLFM4Q6UX06 510 aa15.3■□□□□ 0.04
NUP58-206ENST00000463407 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
NUP58-206ENST00000463407 NEK4P51957 841 aa15.29■□□□□ 0.04
NUP58-206ENST00000463407 CCDC70Q6NSX1 233 aa15.29■□□□□ 0.04
NUP58-206ENST00000463407 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
NUP58-206ENST00000463407 RPGRQ92834 1020 aaKnown RBP15.29■□□□□ 0.04
NUP58-206ENST00000463407 AK7Q96M32 723 aa15.29■□□□□ 0.04
NUP58-206ENST00000463407 KRT18P05783 430 aaKnown RBP15.29■□□□□ 0.04
NUP58-206ENST00000463407 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
NUP58-206ENST00000463407 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
NUP58-206ENST00000463407 CHRNA2Q15822 529 aa15.28■□□□□ 0.04
NUP58-206ENST00000463407 LARP1Q6PKG0 1096 aaKnown RBP15.28■□□□□ 0.04
NUP58-206ENST00000463407 ABCF2Q9UG63 623 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms