RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 ADAM32Q8TC27 787 aa9.3□□□□□ -0.92
DDX1-204ENST00000459706 PRDM9Q9NQV7 894 aa9.3□□□□□ -0.92
DDX1-204ENST00000459706 PCDHB9Q9Y5E1 797 aa9.3□□□□□ -0.92
DDX1-204ENST00000459706 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 CEP164Q9UPV0 1460 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 USP17L3A6NCW0 530 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 USP17L4A6NCW7 530 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 USP17L5A8MUK1 530 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 USP17L2Q6R6M4 530 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 USP17L1Q7RTZ2 530 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 SH3RF1Q7Z6J0 888 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 RNF135Q8IUD6 432 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 CDV3Q9UKY7 258 aaKnown RBP9.29□□□□□ -0.92
DDX1-204ENST00000459706 NESP48681 1621 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 BIVM-ERCC5R4GMW8 1640 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 WRNQ14191 1432 aaPredicted RBP eCLIP9.29□□□□□ -0.92
DDX1-204ENST00000459706 ABCC8Q09428 1581 aa9.29□□□□□ -0.92
DDX1-204ENST00000459706 PTPN5P54829 565 aa9.28□□□□□ -0.92
DDX1-204ENST00000459706 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
DDX1-204ENST00000459706 OCSTAMPQ9BR26 566 aa9.28□□□□□ -0.92
DDX1-204ENST00000459706 KIF21AQ7Z4S6 1674 aa9.28□□□□□ -0.92
DDX1-204ENST00000459706 TLL1O43897 1013 aa9.27□□□□□ -0.93
DDX1-204ENST00000459706 PTCRAQ6ISU1 281 aaPredicted RBP9.27□□□□□ -0.93
DDX1-204ENST00000459706 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
DDX1-204ENST00000459706 TOP2BQ02880 1626 aa9.27□□□□□ -0.93
DDX1-204ENST00000459706 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
DDX1-204ENST00000459706 PIK3CDO00329 1044 aa9.26□□□□□ -0.93
DDX1-204ENST00000459706 LARP1Q6PKG0 1096 aaKnown RBP9.26□□□□□ -0.93
DDX1-204ENST00000459706 TRIM50Q86XT4 487 aa9.26□□□□□ -0.93
DDX1-204ENST00000459706 PLPP7Q8NBV4 271 aa9.26□□□□□ -0.93
DDX1-204ENST00000459706 ZNF516Q92618 1163 aa9.26□□□□□ -0.93
DDX1-204ENST00000459706 MKRN1Q9UHC7 482 aaKnown RBP9.26□□□□□ -0.93
DDX1-204ENST00000459706 EML3Q32P44 896 aa9.25□□□□□ -0.93
DDX1-204ENST00000459706 CDAN1Q8IWY9 1227 aa9.25□□□□□ -0.93
DDX1-204ENST00000459706 FAM174AQ8TBP5 190 aa9.25□□□□□ -0.93
DDX1-204ENST00000459706 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
DDX1-204ENST00000459706 ATP1A2P50993 1020 aa9.24□□□□□ -0.93
DDX1-204ENST00000459706 CDCA8Q53HL2 280 aa9.24□□□□□ -0.93
DDX1-204ENST00000459706 SEPT12Q8IYM1 358 aa9.24□□□□□ -0.93
DDX1-204ENST00000459706 ZNF511Q8NB15 262 aa9.24□□□□□ -0.93
DDX1-204ENST00000459706 CDCA7Q9BWT1 371 aaPredicted RBP9.24□□□□□ -0.93
DDX1-204ENST00000459706 SYNJ1O43426 1573 aa9.24□□□□□ -0.93
DDX1-204ENST00000459706 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
DDX1-204ENST00000459706 GGCXP38435 758 aa9.23□□□□□ -0.93
DDX1-204ENST00000459706 NBPF20Q3BBV1 942 aa9.23□□□□□ -0.93
DDX1-204ENST00000459706 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
DDX1-204ENST00000459706 BAP1Q92560 729 aa9.23□□□□□ -0.93
DDX1-204ENST00000459706 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
DDX1-204ENST00000459706 KCNC4Q03721 635 aa9.22□□□□□ -0.93
DDX1-204ENST00000459706 NCOA4Q13772 614 aa9.22□□□□□ -0.93
DDX1-204ENST00000459706 AGERQ15109 404 aa9.22□□□□□ -0.93
DDX1-204ENST00000459706 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
DDX1-204ENST00000459706 HCSTQ9UBK5 93 aa9.22□□□□□ -0.93
DDX1-204ENST00000459706 NOVA2Q9UNW9 492 aaKnown RBP9.22□□□□□ -0.93
DDX1-204ENST00000459706 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
DDX1-204ENST00000459706 ERCC6Q03468 1493 aa9.21□□□□□ -0.93
DDX1-204ENST00000459706 CUX1P39880 1505 aa9.21□□□□□ -0.93
DDX1-204ENST00000459706 S1PR4O95977 384 aa9.21□□□□□ -0.94
DDX1-204ENST00000459706 RASA1P20936 1047 aa9.21□□□□□ -0.94
DDX1-204ENST00000459706 PTK7Q13308 1070 aa9.21□□□□□ -0.94
DDX1-204ENST00000459706 ERFEQ4G0M1 354 aa9.21□□□□□ -0.94
DDX1-204ENST00000459706 TMCO4Q5TGY1 634 aa9.21□□□□□ -0.94
DDX1-204ENST00000459706 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.94
DDX1-204ENST00000459706 C1QTNF2Q9BXJ5 285 aa9.21□□□□□ -0.94
DDX1-204ENST00000459706 FCF1Q9Y324 198 aaKnown RBP9.21□□□□□ -0.94
DDX1-204ENST00000459706 USP17L15C9J2P7 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L10C9JJH3 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L13C9JLJ4 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L12C9JPN9 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L11C9JVI0 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L21D6R901 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L18D6R9N7 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L22D6RA61 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L17D6RBQ6 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L19D6RCP7 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L20D6RJB6 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 ITGBL1O95965 494 aaPredicted RBP9.2□□□□□ -0.94
DDX1-204ENST00000459706 USP17L24Q0WX57 530 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 LARGE2Q8N3Y3 721 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 SLC10A4Q96EP9 437 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 GZF1Q9H116 711 aaPredicted RBP9.2□□□□□ -0.94
DDX1-204ENST00000459706 GNEQ9Y223 722 aaKnown RBP9.2□□□□□ -0.94
DDX1-204ENST00000459706 MRC2Q9UBG0 1479 aa9.2□□□□□ -0.94
DDX1-204ENST00000459706 WNT7BP56706 349 aa9.19□□□□□ -0.94
DDX1-204ENST00000459706 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
DDX1-204ENST00000459706 ANKLE1Q8NAG6 615 aa9.19□□□□□ -0.94
DDX1-204ENST00000459706 DOLKQ9UPQ8 538 aa9.19□□□□□ -0.94
DDX1-204ENST00000459706 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
DDX1-204ENST00000459706 ESPNB1AK53 854 aa9.18□□□□□ -0.94
DDX1-204ENST00000459706 VARSP26640 1264 aaKnown RBP9.18□□□□□ -0.94
DDX1-204ENST00000459706 USP4Q13107 963 aa9.18□□□□□ -0.94
DDX1-204ENST00000459706 ANKMY2Q8IV38 441 aa9.18□□□□□ -0.94
DDX1-204ENST00000459706 DEPDC4Q8N2C3 294 aa9.18□□□□□ -0.94
DDX1-204ENST00000459706 NKX2-3Q8TAU0 364 aa9.18□□□□□ -0.94
DDX1-204ENST00000459706 TOPBP1Q92547 1522 aa9.18□□□□□ -0.94
DDX1-204ENST00000459706 ZMIZ1Q9ULJ6 1067 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms