RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 CDCA7Q9BWT1 371 aaPredicted RBP23.7■■□□□ 1.38
SHF-202ENST00000458022 CABP2Q9NPB3 220 aa23.7■■□□□ 1.38
SHF-202ENST00000458022 WDR17Q8IZU2 1322 aa23.69■■□□□ 1.38
SHF-202ENST00000458022 CENPJQ9HC77 1338 aaPredicted RBP23.69■■□□□ 1.38
SHF-202ENST00000458022 ZBTB7AO95365 584 aa23.69■■□□□ 1.38
SHF-202ENST00000458022 NBPF1Q3BBV0 1214 aa23.69■■□□□ 1.38
SHF-202ENST00000458022 KIAA1210Q9ULL0 1709 aa23.69■■□□□ 1.38
SHF-202ENST00000458022 CABP1Q9NZU7 370 aa23.67■■□□□ 1.38
SHF-202ENST00000458022 AXIN2Q9Y2T1 843 aa23.67■■□□□ 1.38
SHF-202ENST00000458022 SBF2Q86WG5 1849 aa23.66■■□□□ 1.38
SHF-202ENST00000458022 ZNF784Q8NCA9 323 aaPredicted RBP23.65■■□□□ 1.38
SHF-202ENST00000458022 TXNRD1Q16881 649 aa23.64■■□□□ 1.37
SHF-202ENST00000458022 STK32BQ9NY57 414 aa23.64■■□□□ 1.37
SHF-202ENST00000458022 CPSF1Q10570 1443 aaKnown RBP23.64■■□□□ 1.37
SHF-202ENST00000458022 COL18A1P39060 1754 aa23.63■■□□□ 1.37
SHF-202ENST00000458022 SLC15A2Q16348 729 aa23.63■■□□□ 1.37
SHF-202ENST00000458022 ATF5Q9Y2D1 282 aaPredicted RBP23.63■■□□□ 1.37
SHF-202ENST00000458022 MYOM1P52179 1685 aa23.63■■□□□ 1.37
SHF-202ENST00000458022 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
SHF-202ENST00000458022 SYT17Q9BSW7 474 aa23.62■■□□□ 1.37
SHF-202ENST00000458022 CARD10Q9BWT7 1032 aa23.62■■□□□ 1.37
SHF-202ENST00000458022 FHDC1Q9C0D6 1143 aaPredicted RBP23.61■■□□□ 1.37
SHF-202ENST00000458022 SGIP1Q9BQI5 828 aa23.6■■□□□ 1.37
SHF-202ENST00000458022 MTFR1LQ9H019 292 aa23.6■■□□□ 1.37
SHF-202ENST00000458022 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
SHF-202ENST00000458022 PIK3C2AO00443 1686 aa23.58■■□□□ 1.37
SHF-202ENST00000458022 WNK3Q9BYP7 1800 aa23.58■■□□□ 1.37
SHF-202ENST00000458022 EXOC5O00471 708 aa23.57■■□□□ 1.36
SHF-202ENST00000458022 UTRNP46939 3433 aa23.56■■□□□ 1.36
SHF-202ENST00000458022 CSB-PGBD3P0DP91 1061 aa23.56■■□□□ 1.36
SHF-202ENST00000458022 TTC21BQ7Z4L5 1316 aa23.56■■□□□ 1.36
SHF-202ENST00000458022 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
SHF-202ENST00000458022 TNS2Q63HR2 1409 aa23.54■■□□□ 1.36
SHF-202ENST00000458022 ZNF692Q9BU19 519 aaPredicted RBP23.54■■□□□ 1.36
SHF-202ENST00000458022 QRICH2Q9H0J4 1663 aa23.53■■□□□ 1.36
SHF-202ENST00000458022 EVC2Q86UK5 1308 aa23.53■■□□□ 1.36
SHF-202ENST00000458022 AKAP12Q02952 1782 aa23.52■■□□□ 1.36
SHF-202ENST00000458022 TTC21AQ8NDW8 1320 aa23.52■■□□□ 1.36
SHF-202ENST00000458022 MAP3K5Q99683 1374 aa23.52■■□□□ 1.36
SHF-202ENST00000458022 SOX12O15370 315 aa23.51■■□□□ 1.35
SHF-202ENST00000458022 ARXQ96QS3 562 aa23.5■■□□□ 1.35
SHF-202ENST00000458022 TRPM1Q7Z4N2 1603 aa23.5■■□□□ 1.35
SHF-202ENST00000458022 NFAT5O94916 1531 aa23.49■■□□□ 1.35
SHF-202ENST00000458022 ABCC6O95255 1503 aa23.49■■□□□ 1.35
SHF-202ENST00000458022 C1QTNF8P60827 252 aa23.49■■□□□ 1.35
SHF-202ENST00000458022 SENP3-EIF4A1A0A087X0R7 540 aa23.48■■□□□ 1.35
SHF-202ENST00000458022 NHSQ6T4R5 1651 aa23.47■■□□□ 1.35
SHF-202ENST00000458022 PAPPAQ13219 1627 aa23.46■■□□□ 1.35
SHF-202ENST00000458022 ACSBG1Q96GR2 724 aa23.46■■□□□ 1.35
SHF-202ENST00000458022 ERBB3P21860 1342 aa23.44■■□□□ 1.34
SHF-202ENST00000458022 ZNF827Q17R98 1081 aa23.43■■□□□ 1.34
SHF-202ENST00000458022 RGPD5Q99666 1765 aa23.42■■□□□ 1.34
SHF-202ENST00000458022 KTN1Q86UP2 1357 aaKnown RBP23.41■■□□□ 1.34
SHF-202ENST00000458022 IL2RBP14784 551 aa23.41■■□□□ 1.34
SHF-202ENST00000458022 USP31Q70CQ4 1352 aa23.4■■□□□ 1.34
SHF-202ENST00000458022 LRRC4BQ9NT99 713 aa23.4■■□□□ 1.34
SHF-202ENST00000458022 NLRP2Q9NX02 1062 aa23.4■■□□□ 1.34
SHF-202ENST00000458022 L3MBTL2Q969R5 705 aa23.39■■□□□ 1.33
SHF-202ENST00000458022 GPR162Q16538 588 aa23.38■■□□□ 1.33
SHF-202ENST00000458022 SLC16A10Q8TF71 515 aa23.38■■□□□ 1.33
SHF-202ENST00000458022 AKT1S1Q96B36 256 aa23.38■■□□□ 1.33
SHF-202ENST00000458022 CHD4Q14839 1912 aa23.37■■□□□ 1.33
SHF-202ENST00000458022 SLC27A3Q5K4L6 730 aa23.35■■□□□ 1.33
SHF-202ENST00000458022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.34■■□□□ 1.33
SHF-202ENST00000458022 ANKRD24Q8TF21 1146 aa23.34■■□□□ 1.33
SHF-202ENST00000458022 ROCK2O75116 1388 aaKnown RBP23.33■■□□□ 1.33
SHF-202ENST00000458022 GIGYF1O75420 1035 aaPredicted RBP23.33■■□□□ 1.33
SHF-202ENST00000458022 POLD1P28340 1107 aa23.33■■□□□ 1.33
SHF-202ENST00000458022 BTAF1O14981 1849 aa23.33■■□□□ 1.32
SHF-202ENST00000458022 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.32
SHF-202ENST00000458022 NME9Q86XW9 330 aa23.32■■□□□ 1.32
SHF-202ENST00000458022 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
SHF-202ENST00000458022 SBNO2Q9Y2G9 1366 aa23.31■■□□□ 1.32
SHF-202ENST00000458022 MON2Q7Z3U7 1717 aa23.3■■□□□ 1.32
SHF-202ENST00000458022 KLHL34Q8N239 644 aa23.3■■□□□ 1.32
SHF-202ENST00000458022 CD163L1Q9NR16 1453 aa23.3■■□□□ 1.32
SHF-202ENST00000458022 COL24A1Q17RW2 1714 aa23.26■■□□□ 1.31
SHF-202ENST00000458022 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
SHF-202ENST00000458022 NLGN2Q8NFZ4 835 aa23.26■■□□□ 1.31
SHF-202ENST00000458022 DDX54Q8TDD1 881 aaKnown RBP23.26■■□□□ 1.31
SHF-202ENST00000458022 TFCP2L1Q9NZI6 479 aa23.26■■□□□ 1.31
SHF-202ENST00000458022 QSER1Q2KHR3 1735 aa23.25■■□□□ 1.31
SHF-202ENST00000458022 IFFO2Q5TF58 517 aa23.25■■□□□ 1.31
SHF-202ENST00000458022 EDC4Q6P2E9 1401 aaKnown RBP23.24■■□□□ 1.31
SHF-202ENST00000458022 HDGFL2Q7Z4V5 671 aaPredicted RBP23.23■■□□□ 1.31
SHF-202ENST00000458022 IP6K1Q92551 441 aa23.23■■□□□ 1.31
SHF-202ENST00000458022 ANKRD36BQ8N2N9 1353 aa23.23■■□□□ 1.31
SHF-202ENST00000458022 GRIN3BO60391 1043 aa23.22■■□□□ 1.31
SHF-202ENST00000458022 KCNQ4P56696 695 aa23.22■■□□□ 1.31
SHF-202ENST00000458022 SHANK3Q9BYB0 1731 aa23.22■■□□□ 1.31
SHF-202ENST00000458022 LTN1O94822 1766 aa23.22■■□□□ 1.31
SHF-202ENST00000458022 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
SHF-202ENST00000458022 TMC1Q8TDI8 760 aa23.21■■□□□ 1.31
SHF-202ENST00000458022 NSD2O96028 1365 aa23.21■■□□□ 1.31
SHF-202ENST00000458022 YBX3P16989 372 aaKnown RBP eCLIP23.2■■□□□ 1.3
SHF-202ENST00000458022 SYTL4Q96C24 671 aaPredicted RBP23.2■■□□□ 1.3
SHF-202ENST00000458022 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
SHF-202ENST00000458022 SLC12A5Q9H2X9 1139 aa23.2■■□□□ 1.3
SHF-202ENST00000458022 GOLGB1Q14789 3259 aaKnown RBP23.18■■□□□ 1.3
SHF-202ENST00000458022 TERF2IPQ9NYB0 399 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms