RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 PRM3Q9NNZ6 103 aa14.03□□□□□ -0.16
SMARCAD1-204ENST00000457823 DCTN1Q14203 1278 aa14.03□□□□□ -0.16
SMARCAD1-204ENST00000457823 NAT10Q9H0A0 1025 aaKnown RBP14.03□□□□□ -0.16
SMARCAD1-204ENST00000457823 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.02□□□□□ -0.16
SMARCAD1-204ENST00000457823 RPAP2Q8IXW5 612 aaPredicted RBP14.02□□□□□ -0.16
SMARCAD1-204ENST00000457823 KLHL34Q8N239 644 aa14.02□□□□□ -0.16
SMARCAD1-204ENST00000457823 CCDC43Q96MW1 224 aaKnown RBP14.02□□□□□ -0.16
SMARCAD1-204ENST00000457823 STK3Q13188 491 aa14.02□□□□□ -0.16
SMARCAD1-204ENST00000457823 GPS2Q13227 327 aa14.02□□□□□ -0.16
SMARCAD1-204ENST00000457823 BTBD11A6QL63 1104 aa14.02□□□□□ -0.17
SMARCAD1-204ENST00000457823 OLFM4Q6UX06 510 aa14.02□□□□□ -0.17
SMARCAD1-204ENST00000457823 ARHGEF11O15085 1522 aa14.02□□□□□ -0.17
SMARCAD1-204ENST00000457823 MCM10Q7L590 875 aa14.02□□□□□ -0.17
SMARCAD1-204ENST00000457823 EXOC6BQ9Y2D4 811 aa14.02□□□□□ -0.17
SMARCAD1-204ENST00000457823 TTC39AQ5SRH9 613 aa14.01□□□□□ -0.17
SMARCAD1-204ENST00000457823 BCL11BQ9C0K0 894 aaPredicted RBP14.01□□□□□ -0.17
SMARCAD1-204ENST00000457823 HECW1Q76N89 1606 aa14.01□□□□□ -0.17
SMARCAD1-204ENST00000457823 AACSQ86V21 672 aa14.01□□□□□ -0.17
SMARCAD1-204ENST00000457823 SSH1Q8WYL5 1049 aa14.01□□□□□ -0.17
SMARCAD1-204ENST00000457823 K7ELQ4 463 aaPredicted RBP14.01□□□□□ -0.17
SMARCAD1-204ENST00000457823 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
SMARCAD1-204ENST00000457823 CCDC57Q2TAC2 916 aa14□□□□□ -0.17
SMARCAD1-204ENST00000457823 PDILTQ8N807 584 aa14□□□□□ -0.17
SMARCAD1-204ENST00000457823 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
SMARCAD1-204ENST00000457823 IKQ13123 557 aaPredicted RBP14□□□□□ -0.17
SMARCAD1-204ENST00000457823 STK38Q15208 465 aa14□□□□□ -0.17
SMARCAD1-204ENST00000457823 HMGXB3Q12766 1538 aa14□□□□□ -0.17
SMARCAD1-204ENST00000457823 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
SMARCAD1-204ENST00000457823 CEP126Q9P2H0 1117 aa14□□□□□ -0.17
SMARCAD1-204ENST00000457823 FKBP4Q02790 459 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 RARSP54136 660 aaKnown RBP13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 ADGRF5Q8IZF2 1346 aa13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 CWC27Q6UX04 472 aaKnown RBP13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 SKAP1Q86WV1 359 aa13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 STK11IPQ8N1F8 1099 aa13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 R3HCC1Q9Y3T6 440 aaKnown RBP13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 NUTM2BA6NNL0 878 aaPredicted RBP13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 NUTM2EB1AL46 878 aaPredicted RBP13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 MNS1Q8NEH6 495 aa13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 MPHOSPH8Q99549 860 aa13.99□□□□□ -0.17
SMARCAD1-204ENST00000457823 NAP1L1P55209 391 aaKnown RBP13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 IDI1Q13907 227 aa13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 NME9Q86XW9 330 aa13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.98□□□□□ -0.171e-6■■■■□ 21.2
SMARCAD1-204ENST00000457823 BRPF3Q9ULD4 1205 aa13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 LARP1BQ659C4 914 aaKnown RBP13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 CCDC39Q9UFE4 941 aa13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 PLB1Q6P1J6 1458 aa13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 ABCC5O15440 1437 aa13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 BLOC1S2Q6QNY1 142 aa13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 VSIG10Q8N0Z9 540 aa13.98□□□□□ -0.17
SMARCAD1-204ENST00000457823 OFD1O75665 1012 aa13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 LETM1O95202 739 aaPredicted RBP13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 CCDC85AQ96PX6 553 aaPredicted RBP13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 MAGI1Q96QZ7 1491 aaPredicted RBP13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 TSPY26PQ9H489 355 aa13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 GNL3LQ9NVN8 582 aaKnown RBP13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 CCDC141Q6ZP82 1450 aa13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 SUPT6HQ7KZ85 1726 aaKnown RBP13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 WDR33Q9C0J8 1336 aaKnown RBP13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 ANKRD1Q15327 319 aa13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 FBXO31Q5XUX0 539 aaPredicted RBP13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 ZNF396Q96N95 335 aaPredicted RBP13.97□□□□□ -0.17
SMARCAD1-204ENST00000457823 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.17
SMARCAD1-204ENST00000457823 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.18
SMARCAD1-204ENST00000457823 SLC3A2P08195 630 aaKnown RBP13.96□□□□□ -0.18
SMARCAD1-204ENST00000457823 MPNDQ8N594 471 aa13.96□□□□□ -0.18
SMARCAD1-204ENST00000457823 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.18
SMARCAD1-204ENST00000457823 NUTM1Q86Y26 1132 aa13.95□□□□□ -0.18
SMARCAD1-204ENST00000457823 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
SMARCAD1-204ENST00000457823 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
SMARCAD1-204ENST00000457823 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
SMARCAD1-204ENST00000457823 SMC2O95347 1197 aa13.95□□□□□ -0.18
SMARCAD1-204ENST00000457823 ME1P48163 572 aa13.95□□□□□ -0.18
SMARCAD1-204ENST00000457823 KRT85P78386 507 aa13.95□□□□□ -0.18
SMARCAD1-204ENST00000457823 NCOA1Q15788 1441 aa13.94□□□□□ -0.18
SMARCAD1-204ENST00000457823 ZNF771Q7L3S4 317 aaPredicted RBP13.94□□□□□ -0.18
SMARCAD1-204ENST00000457823 KCNH5Q8NCM2 988 aa13.94□□□□□ -0.18
SMARCAD1-204ENST00000457823 MCM4P33991 863 aa13.94□□□□□ -0.18
SMARCAD1-204ENST00000457823 JMYQ8N9B5 988 aa13.94□□□□□ -0.18
SMARCAD1-204ENST00000457823 FOXO3O43524 673 aa13.94□□□□□ -0.18
SMARCAD1-204ENST00000457823 TTLL5Q6EMB2 1281 aa13.94□□□□□ -0.18
SMARCAD1-204ENST00000457823 TRIM22Q8IYM9 498 aa13.94□□□□□ -0.18
SMARCAD1-204ENST00000457823 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 UPF3BQ9BZI7 483 aaKnown RBP13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 CD109Q6YHK3 1445 aa13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 F6X3S4 739 aa13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 USHBP1Q8N6Y0 703 aa13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 PDRG1Q9NUG6 133 aa13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 ATP2B2Q01814 1243 aa13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 SPC24Q8NBT2 197 aa13.93□□□□□ -0.18
SMARCAD1-204ENST00000457823 TAF7Q15545 349 aaPredicted RBP13.92□□□□□ -0.18
SMARCAD1-204ENST00000457823 NUP133Q8WUM0 1156 aa13.92□□□□□ -0.18
SMARCAD1-204ENST00000457823 KIF1BPQ96EK5 621 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms