RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 UBR1Q8IWV7 1749 aa19.47■□□□□ 0.71
GTF2IRD1-203ENST00000455841 ATP7BP35670 1465 aa19.47■□□□□ 0.71
GTF2IRD1-203ENST00000455841 APBB1O00213 710 aa19.47■□□□□ 0.71
GTF2IRD1-203ENST00000455841 RTF1Q92541 710 aaKnown RBP19.47■□□□□ 0.71
GTF2IRD1-203ENST00000455841 PHF8Q9UPP1 1060 aa19.46■□□□□ 0.71
GTF2IRD1-203ENST00000455841 CPSF1Q10570 1443 aaKnown RBP19.46■□□□□ 0.71
GTF2IRD1-203ENST00000455841 C8orf58Q8NAV2 365 aa19.46■□□□□ 0.71
GTF2IRD1-203ENST00000455841 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
GTF2IRD1-203ENST00000455841 FAM135BQ49AJ0 1406 aa19.46■□□□□ 0.71
GTF2IRD1-203ENST00000455841 TWISTNBQ3B726 338 aaPredicted RBP19.46■□□□□ 0.71
GTF2IRD1-203ENST00000455841 BACH2Q9BYV9 841 aa19.45■□□□□ 0.7
GTF2IRD1-203ENST00000455841 DAXXQ9UER7 740 aaPredicted RBP19.45■□□□□ 0.7
GTF2IRD1-203ENST00000455841 NOP58Q9Y2X3 529 aaKnown RBP19.45■□□□□ 0.7
GTF2IRD1-203ENST00000455841 PLEKHG3A1L390 1219 aa19.44■□□□□ 0.7
GTF2IRD1-203ENST00000455841 ATF7IPQ6VMQ6 1270 aa19.44■□□□□ 0.7
GTF2IRD1-203ENST00000455841 FER1L4A9Z1Z3 1794 aa19.44■□□□□ 0.7
GTF2IRD1-203ENST00000455841 C3P01024 1663 aa19.43■□□□□ 0.7
GTF2IRD1-203ENST00000455841 MVPQ14764 893 aaKnown RBP19.43■□□□□ 0.7
GTF2IRD1-203ENST00000455841 GNAI1P63096 354 aa19.43■□□□□ 0.7
GTF2IRD1-203ENST00000455841 ZNF428Q96B54 188 aa19.43■□□□□ 0.7
GTF2IRD1-203ENST00000455841 DLC1Q96QB1 1528 aa19.42■□□□□ 0.7
GTF2IRD1-203ENST00000455841 SLC4A10Q6U841 1118 aa19.42■□□□□ 0.7
GTF2IRD1-203ENST00000455841 IQSEC2Q5JU85 1478 aa19.42■□□□□ 0.7
GTF2IRD1-203ENST00000455841 KDM2BQ8NHM5 1336 aa19.42■□□□□ 0.7
GTF2IRD1-203ENST00000455841 USP6P35125 1406 aa19.42■□□□□ 0.7
GTF2IRD1-203ENST00000455841 LRRC7Q96NW7 1537 aa19.42■□□□□ 0.7
GTF2IRD1-203ENST00000455841 SIRT1Q96EB6 747 aa19.41■□□□□ 0.7
GTF2IRD1-203ENST00000455841 EYA1Q99502 592 aa19.41■□□□□ 0.7
GTF2IRD1-203ENST00000455841 ZC3H6P61129 1189 aaKnown RBP19.4■□□□□ 0.7
GTF2IRD1-203ENST00000455841 PDZRN3Q9UPQ7 1066 aa19.4■□□□□ 0.7
GTF2IRD1-203ENST00000455841 IPO8O15397 1037 aaKnown RBP19.4■□□□□ 0.7
GTF2IRD1-203ENST00000455841 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.4■□□□□ 0.7
GTF2IRD1-203ENST00000455841 COL3A1P02461 1466 aaPredicted RBP19.4■□□□□ 0.7
GTF2IRD1-203ENST00000455841 PNPLA6Q8IY17 1366 aa19.4■□□□□ 0.7
GTF2IRD1-203ENST00000455841 RIMS1Q86UR5 1692 aaKnown RBP19.39■□□□□ 0.7
GTF2IRD1-203ENST00000455841 MTHFSDQ2M296 383 aaKnown RBP19.39■□□□□ 0.69
GTF2IRD1-203ENST00000455841 LRRC59Q96AG4 307 aaKnown RBP19.39■□□□□ 0.69
GTF2IRD1-203ENST00000455841 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
GTF2IRD1-203ENST00000455841 IPO9Q96P70 1041 aaKnown RBP19.38■□□□□ 0.69
GTF2IRD1-203ENST00000455841 RWDD1Q9H446 243 aaPredicted RBP19.38■□□□□ 0.69
GTF2IRD1-203ENST00000455841 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
GTF2IRD1-203ENST00000455841 CALD1Q05682 793 aaKnown RBP19.38■□□□□ 0.69
GTF2IRD1-203ENST00000455841 SETD1AO15047 1707 aaKnown RBP19.37■□□□□ 0.69
GTF2IRD1-203ENST00000455841 VAMP4O75379 141 aa19.37■□□□□ 0.69
GTF2IRD1-203ENST00000455841 LNPKQ9C0E8 428 aa19.37■□□□□ 0.69
GTF2IRD1-203ENST00000455841 USP32Q8NFA0 1604 aa19.36■□□□□ 0.69
GTF2IRD1-203ENST00000455841 TECPR2O15040 1411 aa19.36■□□□□ 0.69
GTF2IRD1-203ENST00000455841 KIF20BQ96Q89 1820 aa19.36■□□□□ 0.69
GTF2IRD1-203ENST00000455841 FAM161AQ3B820 660 aa19.35■□□□□ 0.69
GTF2IRD1-203ENST00000455841 DDX19BQ9UMR2 479 aa19.35■□□□□ 0.69
GTF2IRD1-203ENST00000455841 CDC42BPGQ6DT37 1551 aa19.35■□□□□ 0.69
GTF2IRD1-203ENST00000455841 CABLES1Q8TDN4 633 aa19.35■□□□□ 0.69
GTF2IRD1-203ENST00000455841 KIF16BQ96L93 1317 aa19.34■□□□□ 0.69
GTF2IRD1-203ENST00000455841 MS4A1P11836 297 aa19.34■□□□□ 0.69
GTF2IRD1-203ENST00000455841 CFAP44Q96MT7 982 aa19.34■□□□□ 0.69
GTF2IRD1-203ENST00000455841 EIF2S2P20042 333 aaKnown RBP19.33■□□□□ 0.69
GTF2IRD1-203ENST00000455841 F6X3S4 739 aa19.33■□□□□ 0.68
GTF2IRD1-203ENST00000455841 IFT57Q9NWB7 429 aa19.33■□□□□ 0.68
GTF2IRD1-203ENST00000455841 HOXC9P31274 260 aa19.32■□□□□ 0.68
GTF2IRD1-203ENST00000455841 RGPD8O14715 1765 aaPredicted RBP19.32■□□□□ 0.68
GTF2IRD1-203ENST00000455841 MED14O60244 1454 aa19.31■□□□□ 0.68
GTF2IRD1-203ENST00000455841 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
GTF2IRD1-203ENST00000455841 SEC24BO95487 1268 aa19.31■□□□□ 0.68
GTF2IRD1-203ENST00000455841 TTC21AQ8NDW8 1320 aa19.31■□□□□ 0.68
GTF2IRD1-203ENST00000455841 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
GTF2IRD1-203ENST00000455841 SPRYD3Q8NCJ5 442 aa19.3■□□□□ 0.68
GTF2IRD1-203ENST00000455841 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
GTF2IRD1-203ENST00000455841 AATKQ6ZMQ8 1374 aa19.3■□□□□ 0.68
GTF2IRD1-203ENST00000455841 ATF3P18847 181 aa19.3■□□□□ 0.68
GTF2IRD1-203ENST00000455841 IL16Q14005 1332 aa19.29■□□□□ 0.68
GTF2IRD1-203ENST00000455841 FLT4P35916 1363 aa19.29■□□□□ 0.68
GTF2IRD1-203ENST00000455841 CDK12Q9NYV4 1490 aaPredicted RBP19.28■□□□□ 0.68
GTF2IRD1-203ENST00000455841 CSB-PGBD3P0DP91 1061 aa19.28■□□□□ 0.68
GTF2IRD1-203ENST00000455841 C8orf34Q49A92 452 aa19.28■□□□□ 0.68
GTF2IRD1-203ENST00000455841 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
GTF2IRD1-203ENST00000455841 CEP170BQ9Y4F5 1589 aaPredicted RBP19.28■□□□□ 0.68
GTF2IRD1-203ENST00000455841 DIP2AQ14689 1571 aa19.27■□□□□ 0.68
GTF2IRD1-203ENST00000455841 ITSN1Q15811 1721 aa19.27■□□□□ 0.68
GTF2IRD1-203ENST00000455841 CHRNA2Q15822 529 aa19.27■□□□□ 0.68
GTF2IRD1-203ENST00000455841 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.68
GTF2IRD1-203ENST00000455841 MFAP1P55081 439 aaKnown RBP19.27■□□□□ 0.67
GTF2IRD1-203ENST00000455841 KRT28Q7Z3Y7 464 aa19.27■□□□□ 0.67
GTF2IRD1-203ENST00000455841 ANXA1P04083 346 aa19.26■□□□□ 0.67
GTF2IRD1-203ENST00000455841 MPRIPQ6WCQ1 1025 aa19.26■□□□□ 0.67
GTF2IRD1-203ENST00000455841 NBPF6Q5VWK0 638 aa19.26■□□□□ 0.67
GTF2IRD1-203ENST00000455841 G2E3Q7L622 706 aa19.26■□□□□ 0.67
GTF2IRD1-203ENST00000455841 NBPF4Q96M43 638 aa19.26■□□□□ 0.67
GTF2IRD1-203ENST00000455841 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
GTF2IRD1-203ENST00000455841 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
GTF2IRD1-203ENST00000455841 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
GTF2IRD1-203ENST00000455841 ARHGAP23Q9P227 1491 aa19.25■□□□□ 0.67
GTF2IRD1-203ENST00000455841 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
GTF2IRD1-203ENST00000455841 FKBP5Q13451 457 aaPredicted RBP19.23■□□□□ 0.67
GTF2IRD1-203ENST00000455841 SBNO1A3KN83 1393 aa19.23■□□□□ 0.67
GTF2IRD1-203ENST00000455841 GCP02774 474 aa19.23■□□□□ 0.67
GTF2IRD1-203ENST00000455841 GAS2L2Q8NHY3 880 aa19.23■□□□□ 0.67
GTF2IRD1-203ENST00000455841 SLIT1O75093 1534 aa19.23■□□□□ 0.67
GTF2IRD1-203ENST00000455841 ALDH1L2Q3SY69 923 aa19.23■□□□□ 0.67
GTF2IRD1-203ENST00000455841 STK31Q9BXU1 1019 aa19.23■□□□□ 0.67
GTF2IRD1-203ENST00000455841 ANKRD26Q9UPS8 1709 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms