RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SNPHO15079 494 aa8.78□□□□□ -1
SBDSP1-204ENST00000453858 ZBTB7AO95365 584 aa8.78□□□□□ -1
SBDSP1-204ENST00000453858 HDGFP51858 240 aaKnown RBP8.78□□□□□ -1
SBDSP1-204ENST00000453858 WDR70Q9NW82 654 aa8.78□□□□□ -1
SBDSP1-204ENST00000453858 TMEM131LA2VDJ0 1609 aa8.78□□□□□ -1
SBDSP1-204ENST00000453858 EHBP1L1Q8N3D4 1523 aa8.78□□□□□ -1
SBDSP1-204ENST00000453858 G3V3G9 751 aa8.77□□□□□ -1.01
SBDSP1-204ENST00000453858 ST18O60284 1047 aa8.77□□□□□ -1.01
SBDSP1-204ENST00000453858 FAM196AQ6ZSG2 479 aa8.77□□□□□ -1.01
SBDSP1-204ENST00000453858 WWC3Q9ULE0 1092 aa8.77□□□□□ -1.01
SBDSP1-204ENST00000453858 RPRD2Q5VT52 1461 aaKnown RBP8.77□□□□□ -1.01
SBDSP1-204ENST00000453858 PDE4AP27815 886 aa8.76□□□□□ -1.01
SBDSP1-204ENST00000453858 TMEM121BQ9BXQ6 578 aaPredicted RBP8.76□□□□□ -1.01
SBDSP1-204ENST00000453858 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
SBDSP1-204ENST00000453858 EIF2AK4Q9P2K8 1649 aaKnown RBP8.76□□□□□ -1.01
SBDSP1-204ENST00000453858 XRN1Q8IZH2 1706 aaKnown RBP8.75□□□□□ -1.01
SBDSP1-204ENST00000453858 ATP10DQ9P241 1426 aa8.75□□□□□ -1.01
SBDSP1-204ENST00000453858 TSPY4P0CV99 314 aa8.75□□□□□ -1.01
SBDSP1-204ENST00000453858 TSPY10P0CW01 314 aa8.75□□□□□ -1.01
SBDSP1-204ENST00000453858 GPR162Q16538 588 aa8.75□□□□□ -1.01
SBDSP1-204ENST00000453858 CCDC9Q9Y3X0 531 aaKnown RBP8.75□□□□□ -1.01
SBDSP1-204ENST00000453858 DLC1Q96QB1 1528 aa8.75□□□□□ -1.01
SBDSP1-204ENST00000453858 ADGRB2O60241 1585 aa8.74□□□□□ -1.01
SBDSP1-204ENST00000453858 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.74□□□□□ -1.01
SBDSP1-204ENST00000453858 KIF3CO14782 793 aa8.73□□□□□ -1.01
SBDSP1-204ENST00000453858 XPCQ01831 940 aaPredicted RBP8.73□□□□□ -1.01
SBDSP1-204ENST00000453858 KLRG1Q96E93 195 aa8.73□□□□□ -1.01
SBDSP1-204ENST00000453858 GPBP1L1Q9HC44 474 aaPredicted RBP8.73□□□□□ -1.01
SBDSP1-204ENST00000453858 NWD2Q9ULI1 1742 aa8.73□□□□□ -1.01
SBDSP1-204ENST00000453858 NPHP3Q7Z494 1330 aa8.73□□□□□ -1.01
SBDSP1-204ENST00000453858 ADGRL2O95490 1459 aa8.72□□□□□ -1.01
SBDSP1-204ENST00000453858 A0A0G2JS52 829 aa8.72□□□□□ -1.01
SBDSP1-204ENST00000453858 FOXO3O43524 673 aa8.72□□□□□ -1.01
SBDSP1-204ENST00000453858 MYT1Q01538 1121 aa8.72□□□□□ -1.01
SBDSP1-204ENST00000453858 C3orf67Q6ZVT6 689 aa8.72□□□□□ -1.01
SBDSP1-204ENST00000453858 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
SBDSP1-204ENST00000453858 SPATA31A3Q5VYP0 1347 aa8.72□□□□□ -1.01
SBDSP1-204ENST00000453858 METP08581 1390 aa8.72□□□□□ -1.01
SBDSP1-204ENST00000453858 USP32Q8NFA0 1604 aa8.71□□□□□ -1.02
SBDSP1-204ENST00000453858 SPATA31A5Q5VU36 1347 aa8.71□□□□□ -1.02
SBDSP1-204ENST00000453858 SPATA31A7Q8IWB4 1347 aa8.71□□□□□ -1.02
SBDSP1-204ENST00000453858 CROCC2H7BZ55 1655 aa8.71□□□□□ -1.02
SBDSP1-204ENST00000453858 THSD7AQ9UPZ6 1657 aa8.71□□□□□ -1.02
SBDSP1-204ENST00000453858 AATKQ6ZMQ8 1374 aa8.71□□□□□ -1.02
SBDSP1-204ENST00000453858 NALCNQ8IZF0 1738 aa8.71□□□□□ -1.02
SBDSP1-204ENST00000453858 MYO5BQ9ULV0 1848 aa8.7□□□□□ -1.02
SBDSP1-204ENST00000453858 LMTK2Q8IWU2 1503 aa8.7□□□□□ -1.02
SBDSP1-204ENST00000453858 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
SBDSP1-204ENST00000453858 MICALL2Q8IY33 904 aa8.7□□□□□ -1.02
SBDSP1-204ENST00000453858 ARXQ96QS3 562 aa8.7□□□□□ -1.02
SBDSP1-204ENST00000453858 ADCY9O60503 1353 aa8.7□□□□□ -1.02
SBDSP1-204ENST00000453858 TNS2Q63HR2 1409 aa8.7□□□□□ -1.02
SBDSP1-204ENST00000453858 ARHGEF5Q12774 1597 aa8.69□□□□□ -1.02
SBDSP1-204ENST00000453858 PTPN23Q9H3S7 1636 aa8.69□□□□□ -1.02
SBDSP1-204ENST00000453858 CDAN1Q8IWY9 1227 aa8.69□□□□□ -1.02
SBDSP1-204ENST00000453858 CABLES1Q8TDN4 633 aa8.69□□□□□ -1.02
SBDSP1-204ENST00000453858 MTFR1LQ9H019 292 aa8.69□□□□□ -1.02
SBDSP1-204ENST00000453858 CRISPLD2Q9H0B8 497 aa8.69□□□□□ -1.02
SBDSP1-204ENST00000453858 PLCH1Q4KWH8 1693 aa8.69□□□□□ -1.02
SBDSP1-204ENST00000453858 PLSCR1O15162 318 aa8.68□□□□□ -1.02
SBDSP1-204ENST00000453858 YBX3P16989 372 aaKnown RBP eCLIP8.68□□□□□ -1.02
SBDSP1-204ENST00000453858 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
SBDSP1-204ENST00000453858 ABCC5O15440 1437 aa8.67□□□□□ -1.02
SBDSP1-204ENST00000453858 HTRA3P83110 453 aa8.67□□□□□ -1.02
SBDSP1-204ENST00000453858 MFSD10Q14728 455 aa8.67□□□□□ -1.02
SBDSP1-204ENST00000453858 ESCO1Q5FWF5 840 aa8.67□□□□□ -1.02
SBDSP1-204ENST00000453858 NEXMIFQ5QGS0 1516 aa8.67□□□□□ -1.02
SBDSP1-204ENST00000453858 LARP6Q9BRS8 491 aaKnown RBP8.67□□□□□ -1.02
SBDSP1-204ENST00000453858 DDX27Q96GQ7 796 aaKnown RBP8.66□□□□□ -1.02
SBDSP1-204ENST00000453858 GPHNQ9NQX3 736 aaPredicted RBP8.66□□□□□ -1.02
SBDSP1-204ENST00000453858 BTG4Q9NY30 223 aa8.66□□□□□ -1.02
SBDSP1-204ENST00000453858 NRAPQ86VF7 1730 aa8.66□□□□□ -1.02
SBDSP1-204ENST00000453858 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.02
SBDSP1-204ENST00000453858 DUOX2Q9NRD8 1548 aa8.65□□□□□ -1.02
SBDSP1-204ENST00000453858 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
SBDSP1-204ENST00000453858 GRIN3BO60391 1043 aa8.64□□□□□ -1.03
SBDSP1-204ENST00000453858 E2F4Q16254 413 aa8.64□□□□□ -1.03
SBDSP1-204ENST00000453858 TMC2Q8TDI7 906 aa8.64□□□□□ -1.03
SBDSP1-204ENST00000453858 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
SBDSP1-204ENST00000453858 CEP162Q5TB80 1403 aa8.63□□□□□ -1.03
SBDSP1-204ENST00000453858 SPATA31A1Q5TZJ5 1347 aa8.63□□□□□ -1.03
SBDSP1-204ENST00000453858 NBR1Q14596 966 aa8.63□□□□□ -1.03
SBDSP1-204ENST00000453858 EEA1Q15075 1411 aa8.63□□□□□ -1.03
SBDSP1-204ENST00000453858 ROBO2Q9HCK4 1378 aa8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 TOMM70O94826 608 aa8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 RGS19P49795 217 aa8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 SLC15A2Q16348 729 aa8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 PTF1AQ7RTS3 328 aa8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 NLGN2Q8NFZ4 835 aa8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 ARHGEF1Q92888 912 aaKnown RBP8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 GCC2Q8IWJ2 1684 aa8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 PDE4DIPQ5VU43 2346 aa8.62□□□□□ -1.03
SBDSP1-204ENST00000453858 LRPPRCP42704 1394 aaKnown RBP8.61□□□□□ -1.03
SBDSP1-204ENST00000453858 HSPA1AP0DMV8 641 aaKnown RBP8.61□□□□□ -1.03
SBDSP1-204ENST00000453858 HSPA1BP0DMV9 641 aaKnown RBP8.61□□□□□ -1.03
SBDSP1-204ENST00000453858 UBTFP17480 764 aaKnown RBP8.61□□□□□ -1.03
SBDSP1-204ENST00000453858 KRT28Q7Z3Y7 464 aa8.61□□□□□ -1.03
SBDSP1-204ENST00000453858 ERBINQ96RT1 1412 aa8.61□□□□□ -1.03
SBDSP1-204ENST00000453858 KANK1Q14678 1352 aa8.61□□□□□ -1.03
SBDSP1-204ENST00000453858 WDR90Q96KV7 1748 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms