RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CHIC2Q9UKJ5 165 aa9.44□□□□□ -0.9
HMGB1P26-201ENST00000452520 MAFBQ9Y5Q3 323 aaPredicted RBP9.44□□□□□ -0.9
HMGB1P26-201ENST00000452520 ESPNB1AK53 854 aa9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 WNT7AO00755 349 aa9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 SIAH2O43255 324 aa9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 PPP1R15AO75807 674 aaPredicted RBP9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 NBPF20Q3BBV1 942 aa9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 KCTD15Q96SI1 283 aaPredicted RBP9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 PRKD2Q9BZL6 878 aa9.42□□□□□ -0.9
HMGB1P26-201ENST00000452520 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
HMGB1P26-201ENST00000452520 RNF20Q5VTR2 975 aa9.41□□□□□ -0.9
HMGB1P26-201ENST00000452520 VASH1Q7L8A9 365 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P26-201ENST00000452520 MPNDQ8N594 471 aa9.41□□□□□ -0.9
HMGB1P26-201ENST00000452520 MRGPRX2Q96LB1 330 aa9.41□□□□□ -0.9
HMGB1P26-201ENST00000452520 MAP4K5Q9Y4K4 846 aa9.41□□□□□ -0.9
HMGB1P26-201ENST00000452520 V9GY48 417 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P26-201ENST00000452520 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P26-201ENST00000452520 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
HMGB1P26-201ENST00000452520 MAP7D1Q3KQU3 841 aa9.4□□□□□ -0.9
HMGB1P26-201ENST00000452520 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
HMGB1P26-201ENST00000452520 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
HMGB1P26-201ENST00000452520 PLPP7Q8NBV4 271 aa9.4□□□□□ -0.9
HMGB1P26-201ENST00000452520 PBXIP1Q96AQ6 731 aa9.4□□□□□ -0.9
HMGB1P26-201ENST00000452520 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
HMGB1P26-201ENST00000452520 USP17L5A8MUK1 530 aa9.39□□□□□ -0.91
HMGB1P26-201ENST00000452520 LZTS3O60299 673 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P26-201ENST00000452520 GRM5P41594 1212 aa9.39□□□□□ -0.91
HMGB1P26-201ENST00000452520 ZNF697Q5TEC3 545 aa9.39□□□□□ -0.91
HMGB1P26-201ENST00000452520 TRAF7Q6Q0C0 670 aa9.39□□□□□ -0.91
HMGB1P26-201ENST00000452520 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
HMGB1P26-201ENST00000452520 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
HMGB1P26-201ENST00000452520 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P26-201ENST00000452520 USP17L2Q6R6M4 530 aa9.38□□□□□ -0.91
HMGB1P26-201ENST00000452520 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
HMGB1P26-201ENST00000452520 CCDC125Q86Z20 511 aa9.38□□□□□ -0.91
HMGB1P26-201ENST00000452520 DEPDC4Q8N2C3 294 aa9.38□□□□□ -0.91
HMGB1P26-201ENST00000452520 VRTNQ9H8Y1 702 aa9.38□□□□□ -0.91
HMGB1P26-201ENST00000452520 FOXC1Q12948 553 aa9.37□□□□□ -0.91
HMGB1P26-201ENST00000452520 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
HMGB1P26-201ENST00000452520 PKD2L1Q9P0L9 805 aa9.37□□□□□ -0.91
HMGB1P26-201ENST00000452520 NCOA4Q13772 614 aa9.36□□□□□ -0.91
HMGB1P26-201ENST00000452520 DOLKQ9UPQ8 538 aa9.36□□□□□ -0.91
HMGB1P26-201ENST00000452520 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
HMGB1P26-201ENST00000452520 RAB15P59190 212 aa9.35□□□□□ -0.91
HMGB1P26-201ENST00000452520 INTS6LQ5JSJ4 861 aaKnown RBP9.35□□□□□ -0.91
HMGB1P26-201ENST00000452520 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P26-201ENST00000452520 MKRN1Q9UHC7 482 aaKnown RBP9.35□□□□□ -0.91
HMGB1P26-201ENST00000452520 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
HMGB1P26-201ENST00000452520 ERVH48-1M5A8F1 160 aa9.34□□□□□ -0.91
HMGB1P26-201ENST00000452520 ADH1CP00326 375 aa9.34□□□□□ -0.91
HMGB1P26-201ENST00000452520 EML3Q32P44 896 aa9.34□□□□□ -0.91
HMGB1P26-201ENST00000452520 GDF9O60383 454 aa9.33□□□□□ -0.92
HMGB1P26-201ENST00000452520 USP4Q13107 963 aa9.33□□□□□ -0.92
HMGB1P26-201ENST00000452520 NR5A1Q13285 461 aa9.33□□□□□ -0.92
HMGB1P26-201ENST00000452520 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
HMGB1P26-201ENST00000452520 SNIP1Q8TAD8 396 aaKnown RBP9.33□□□□□ -0.92
HMGB1P26-201ENST00000452520 ATG7O95352 703 aa9.32□□□□□ -0.92
HMGB1P26-201ENST00000452520 ALDH1A1P00352 501 aa9.32□□□□□ -0.92
HMGB1P26-201ENST00000452520 FSHRP23945 695 aa9.32□□□□□ -0.92
HMGB1P26-201ENST00000452520 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
HMGB1P26-201ENST00000452520 ATP5J2-PTCD1G3V325 749 aa9.31□□□□□ -0.92
HMGB1P26-201ENST00000452520 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
HMGB1P26-201ENST00000452520 RASA1P20936 1047 aa9.3□□□□□ -0.92
HMGB1P26-201ENST00000452520 RETREG2Q8NC44 543 aa9.3□□□□□ -0.92
HMGB1P26-201ENST00000452520 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
HMGB1P26-201ENST00000452520 TMPRSS4Q9NRS4 437 aa9.3□□□□□ -0.92
HMGB1P26-201ENST00000452520 NR3C2P08235 984 aa9.29□□□□□ -0.92
HMGB1P26-201ENST00000452520 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
HMGB1P26-201ENST00000452520 TRIM50Q86XT4 487 aa9.29□□□□□ -0.92
HMGB1P26-201ENST00000452520 CCDC116Q8IYX3 515 aa9.29□□□□□ -0.92
HMGB1P26-201ENST00000452520 TNFRSF10AO00220 468 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 RGS20O76081 388 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 SCTRP47872 440 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 CLDN10P78369 228 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 ELOAQ14241 798 aaKnown RBP9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 PPP1R26Q5T8A7 1209 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 TRIM67Q6ZTA4 783 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 CYP4X1Q8N118 509 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 OGFOD1Q8N543 542 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 PCDHGA11Q9Y5H2 935 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 WASF2Q9Y6W5 498 aa9.28□□□□□ -0.92
HMGB1P26-201ENST00000452520 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 FAM196BA6NMK8 535 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 J3QL48 77 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 ZBTB7BO15156 539 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 MYCP01106 439 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 ERVK-9P63128 1117 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 PRR20EP86478 221 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 PRR20CP86479 221 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 PRR20DP86480 221 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 PRR20BP86481 221 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 PRR20AP86496 221 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 PTK7Q13308 1070 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 CRTC2Q53ET0 693 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
HMGB1P26-201ENST00000452520 CSB-PGBD3P0DP91 1061 aa9.26□□□□□ -0.93
HMGB1P26-201ENST00000452520 ATP1A2P50993 1020 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms