RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SLC4A3P48751 1232 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 MNAT1P51948 309 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 RBBP5Q15291 538 aaKnown RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 TPRNQ4KMQ1 711 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 SH2D4BQ5SQS7 431 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 RBM26Q5T8P6 1007 aaKnown RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 ANKRD18AQ8IVF6 992 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 FAM210AQ96ND0 272 aa2.62□□□□□ -1.99
USP53-202ENST00000450251 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.62□□□□□ -1.99
USP53-202ENST00000450251 WDR33Q9C0J8 1336 aaKnown RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 ERCC6L2Q5T890 1561 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 ZSCAN12O43309 604 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 ARID4AP29374 1257 aaPredicted RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 EIF5P55010 431 aaKnown RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 SATB1Q01826 763 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 TUBB2AQ13885 445 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 TSR1Q2NL82 804 aaKnown RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 CCDC183Q5T5S1 534 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 CNPY4Q8N129 248 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 ZNF526Q8TF50 670 aaPredicted RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 ZFP91Q96JP5 570 aaPredicted RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 TUBB2BQ9BVA1 445 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 USP25Q9UHP3 1055 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 ZMYM4Q5VZL5 1548 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 FYB1O15117 783 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 NPM1P06748 294 aaKnown RBP eCLIP2.61□□□□□ -1.99
USP53-202ENST00000450251 IRX1P78414 480 aaPredicted RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 PKD2Q13563 968 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 ZKSCAN8Q15776 578 aaPredicted RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 UBXN4Q92575 508 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 CLUAP1Q96AJ1 413 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 NBPF3Q9H094 633 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 NCOA2Q15596 1464 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 EPRSP07814 1512 aaKnown RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 CCDC172P0C7W6 258 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 LRSAM1Q6UWE0 723 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 GIGYF2Q6Y7W6 1299 aaKnown RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 CTCFLQ8NI51 663 aaPredicted RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.61□□□□□ -1.996e-8■■■■■ 55.9
USP53-202ENST00000450251 SPATS2LQ9NUQ6 558 aaKnown RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 RAI14Q9P0K7 980 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 CEP83Q9Y592 693 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 EFCAB5A4FU69 1503 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 GRIN2AQ12879 1464 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 GTF2F1P35269 517 aaKnown RBP eCLIP2.61□□□□□ -1.99
USP53-202ENST00000450251 PTPN14Q15678 1187 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 NBPF20Q3BBV1 942 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.61□□□□□ -1.99
USP53-202ENST00000450251 NBPF11Q86T75 865 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 SMARCE1Q969G3 411 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 SNX21Q969T3 373 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 DTNBP1Q96EV8 351 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 GPATCH3Q96I76 525 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 RMDN2Q96LZ7 410 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 TCHPQ9BT92 498 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 GAPVD1Q14C86 1478 aa2.61□□□□□ -1.99
USP53-202ENST00000450251 PITPNM1O00562 1244 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 SMC2O95347 1197 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 IPO7O95373 1038 aaKnown RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 NOLC1Q14978 699 aaKnown RBP eCLIP2.6□□□□□ -1.99
USP53-202ENST00000450251 SAMD1Q6SPF0 538 aaPredicted RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 CCDC150Q8NCX0 1101 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 GOLGA5Q8TBA6 731 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 ERO1AQ96HE7 468 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 STAC3Q96MF2 364 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 ADAMTS12P58397 1594 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 LUC7L3O95232 432 aaKnown RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 CASQ1P31415 396 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 XPCQ01831 940 aaPredicted RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 KLHL10Q6JEL2 608 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 B4GALNT4Q76KP1 1039 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 PLCD3Q8N3E9 789 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 SIN3AQ96ST3 1273 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 LRRCC1Q9C099 1032 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 TIAM1Q13009 1591 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 TTC36A6NLP5 189 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 PPFIA3O75145 1194 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 PIP4K2AP48426 406 aaPredicted RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 PDCD2Q16342 344 aaPredicted RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 ZKSCAN2Q63HK3 967 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 SPATA24Q86W54 205 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 EFCAB13Q8IY85 973 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 RBM33Q96EV2 1170 aaKnown RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 UTP14AQ9BVJ6 771 aaKnown RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 BSDC1Q9NW68 430 aaPredicted RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 LRRFIP2Q9Y608 721 aaKnown RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 FYCO1Q9BQS8 1478 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 WDR7Q9Y4E6 1490 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 FSD2A1L4K1 749 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 ARHGAP25P42331 645 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 ICE2Q659A1 982 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 CEP135Q66GS9 1140 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 CCDC146Q8IYE0 955 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 GBP7Q8N8V2 638 aaPredicted RBP2.6□□□□□ -1.99
USP53-202ENST00000450251 PIBF1Q8WXW3 757 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 FMNL2Q96PY5 1086 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 DACH1Q9UI36 760 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 ZBTB7CA1YPR0 619 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 PDCP20941 246 aa2.6□□□□□ -1.99
USP53-202ENST00000450251 ZNF445P59923 1031 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms