RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 PPIP5K1Q6PFW1 1433 aa6.86□□□□□ -1.31
LMO3-209ENST00000447609 CHRNA2Q15822 529 aa6.86□□□□□ -1.31
LMO3-209ENST00000447609 BRINP3Q76B58 766 aa6.86□□□□□ -1.31
LMO3-209ENST00000447609 NME9Q86XW9 330 aa6.86□□□□□ -1.31
LMO3-209ENST00000447609 ALKQ9UM73 1620 aa6.86□□□□□ -1.31
LMO3-209ENST00000447609 VIRMAQ69YN4 1812 aaKnown RBP6.85□□□□□ -1.31
LMO3-209ENST00000447609 HSPA1LP34931 641 aa6.85□□□□□ -1.31
LMO3-209ENST00000447609 TERF1P54274 439 aa6.85□□□□□ -1.31
LMO3-209ENST00000447609 SKOR2Q2VWA4 1001 aaPredicted RBP6.85□□□□□ -1.31
LMO3-209ENST00000447609 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.85□□□□□ -1.31
LMO3-209ENST00000447609 CHMP5Q9NZZ3 219 aa6.85□□□□□ -1.31
LMO3-209ENST00000447609 ARHGAP23Q9P227 1491 aa6.85□□□□□ -1.31
LMO3-209ENST00000447609 SLIT1O75093 1534 aa6.85□□□□□ -1.31
LMO3-209ENST00000447609 TMEM131LA2VDJ0 1609 aa6.85□□□□□ -1.31
LMO3-209ENST00000447609 FSD2A1L4K1 749 aa6.85□□□□□ -1.31
LMO3-209ENST00000447609 NGEFQ8N5V2 710 aa6.85□□□□□ -1.31
LMO3-209ENST00000447609 BLMP54132 1417 aaPredicted RBP6.84□□□□□ -1.31
LMO3-209ENST00000447609 NEXMIFQ5QGS0 1516 aa6.84□□□□□ -1.31
LMO3-209ENST00000447609 U2AF1L5P0DN76 240 aaPredicted RBP6.84□□□□□ -1.31
LMO3-209ENST00000447609 U2AF1Q01081 240 aaKnown RBP eCLIP6.84□□□□□ -1.31
LMO3-209ENST00000447609 NEUROD2Q15784 382 aa6.84□□□□□ -1.31
LMO3-209ENST00000447609 ADGRL3Q9HAR2 1447 aa6.84□□□□□ -1.31
LMO3-209ENST00000447609 PARD3Q8TEW0 1356 aa6.84□□□□□ -1.31
LMO3-209ENST00000447609 XRCC6P12956 609 aaKnown RBP eCLIP6.84□□□□□ -1.31
LMO3-209ENST00000447609 MCM4P33991 863 aa6.84□□□□□ -1.31
LMO3-209ENST00000447609 RAPGEF4Q8WZA2 1011 aa6.84□□□□□ -1.31
LMO3-209ENST00000447609 SLKQ9H2G2 1235 aaPredicted RBP6.84□□□□□ -1.31
LMO3-209ENST00000447609 TTC21BQ7Z4L5 1316 aa6.83□□□□□ -1.32
LMO3-209ENST00000447609 PLIN1O60240 522 aa6.83□□□□□ -1.32
LMO3-209ENST00000447609 MSNP26038 577 aaKnown RBP6.83□□□□□ -1.32
LMO3-209ENST00000447609 FAM135BQ49AJ0 1406 aa6.83□□□□□ -1.32
LMO3-209ENST00000447609 GBP4Q96PP9 640 aa6.83□□□□□ -1.32
LMO3-209ENST00000447609 UBR1Q8IWV7 1749 aa6.83□□□□□ -1.32
LMO3-209ENST00000447609 GOLGA6L22H0YM25 854 aa6.83□□□□□ -1.32
LMO3-209ENST00000447609 GOLGA2Q08379 1002 aa6.83□□□□□ -1.32
LMO3-209ENST00000447609 RRS1Q15050 365 aaKnown RBP6.83□□□□□ -1.32
LMO3-209ENST00000447609 GRPEL1Q9HAV7 217 aa6.83□□□□□ -1.32
LMO3-209ENST00000447609 SENP3-EIF4A1A0A087X0R7 540 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 TRAK2O60296 914 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 SYTL4Q96C24 671 aaPredicted RBP6.82□□□□□ -1.32
LMO3-209ENST00000447609 ARXQ96QS3 562 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 PTPRUQ92729 1446 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 NSD3Q9BZ95 1437 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 DISP3Q9P2K9 1392 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 CPS1P31327 1500 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 CANXP27824 592 aaKnown RBP6.82□□□□□ -1.32
LMO3-209ENST00000447609 CCDC173Q0VFZ6 552 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 SF3B2Q13435 895 aaKnown RBP6.82□□□□□ -1.32
LMO3-209ENST00000447609 AMER1Q5JTC6 1135 aaPredicted RBP6.82□□□□□ -1.32
LMO3-209ENST00000447609 TTC21AQ8NDW8 1320 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 IQGAP1P46940 1657 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 NKTRP30414 1462 aaKnown RBP6.82□□□□□ -1.32
LMO3-209ENST00000447609 PLEKHG3A1L390 1219 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 TESK2Q96S53 571 aa6.82□□□□□ -1.32
LMO3-209ENST00000447609 HSCBQ8IWL3 235 aa6.81□□□□□ -1.32
LMO3-209ENST00000447609 ARHGEF10O15013 1369 aa6.81□□□□□ -1.32
LMO3-209ENST00000447609 GCP02774 474 aa6.81□□□□□ -1.32
LMO3-209ENST00000447609 CDCA7LQ96GN5 454 aa6.81□□□□□ -1.32
LMO3-209ENST00000447609 ZRANB1Q9UGI0 708 aa6.81□□□□□ -1.32
LMO3-209ENST00000447609 PRR36Q9H6K5 1346 aa6.81□□□□□ -1.32
LMO3-209ENST00000447609 DIAPH1O60610 1272 aaKnown RBP6.8□□□□□ -1.32
LMO3-209ENST00000447609 RTF1Q92541 710 aaKnown RBP6.8□□□□□ -1.32
LMO3-209ENST00000447609 PUS7Q96PZ0 661 aaKnown RBP6.8□□□□□ -1.32
LMO3-209ENST00000447609 USP21Q9UK80 565 aa6.8□□□□□ -1.32
LMO3-209ENST00000447609 MED14O60244 1454 aa6.8□□□□□ -1.32
LMO3-209ENST00000447609 MTHFSP49914 203 aa6.8□□□□□ -1.32
LMO3-209ENST00000447609 PDE3AQ14432 1141 aa6.8□□□□□ -1.32
LMO3-209ENST00000447609 CSPP1Q1MSJ5 1256 aa6.8□□□□□ -1.32
LMO3-209ENST00000447609 BTG4Q9NY30 223 aa6.8□□□□□ -1.32
LMO3-209ENST00000447609 MYO5BQ9ULV0 1848 aa6.8□□□□□ -1.32
LMO3-209ENST00000447609 PTCH1Q13635 1447 aa6.8□□□□□ -1.32
LMO3-209ENST00000447609 CIZ1Q9ULV3 898 aaPredicted RBP6.8□□□□□ -1.32
LMO3-209ENST00000447609 TATP17735 454 aaPredicted RBP6.79□□□□□ -1.32
LMO3-209ENST00000447609 C1orf141Q5JVX7 400 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 ILDR1Q86SU0 546 aaPredicted RBP6.79□□□□□ -1.32
LMO3-209ENST00000447609 DDX54Q8TDD1 881 aaKnown RBP6.79□□□□□ -1.32
LMO3-209ENST00000447609 C1orf167Q5SNV9 1468 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 DIP2AQ14689 1571 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 JCADQ9P266 1359 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 FBLN1P23142 703 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 KIAA1211Q6ZU35 1233 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 ZSCAN30Q86W11 494 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 SMAP1Q8IYB5 467 aaPredicted RBP6.79□□□□□ -1.32
LMO3-209ENST00000447609 GZF1Q9H116 711 aaPredicted RBP6.79□□□□□ -1.32
LMO3-209ENST00000447609 LRRC7Q96NW7 1537 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 ANKRD36BQ8N2N9 1353 aa6.79□□□□□ -1.32
LMO3-209ENST00000447609 HMOX1P09601 288 aa6.78□□□□□ -1.32
LMO3-209ENST00000447609 TBC1D32Q96NH3 1257 aa6.78□□□□□ -1.32
LMO3-209ENST00000447609 ANTXR1Q9H6X2 564 aa6.78□□□□□ -1.32
LMO3-209ENST00000447609 HS1BP3Q53T59 392 aa6.78□□□□□ -1.32
LMO3-209ENST00000447609 NCOA3Q9Y6Q9 1424 aa6.78□□□□□ -1.32
LMO3-209ENST00000447609 FYB1O15117 783 aa6.78□□□□□ -1.32
LMO3-209ENST00000447609 E9PSI1 815 aa6.77□□□□□ -1.33
LMO3-209ENST00000447609 OFD1O75665 1012 aa6.77□□□□□ -1.33
LMO3-209ENST00000447609 ZNF772Q68DY9 489 aaPredicted RBP6.77□□□□□ -1.33
LMO3-209ENST00000447609 AKT1S1Q96B36 256 aa6.77□□□□□ -1.33
LMO3-209ENST00000447609 RWDD1Q9H446 243 aaPredicted RBP6.77□□□□□ -1.33
LMO3-209ENST00000447609 QTRT2Q9H974 415 aaKnown RBP6.77□□□□□ -1.33
LMO3-209ENST00000447609 EMILIN1Q9Y6C2 1016 aa6.77□□□□□ -1.33
LMO3-209ENST00000447609 SPATA31A3Q5VYP0 1347 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms