RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 C1QTNF2Q9BXJ5 285 aa7.33□□□□□ -1.24
R3HDM1-211ENST00000445855 PPEF1O14829 653 aaPredicted RBP7.32□□□□□ -1.24
R3HDM1-211ENST00000445855 SH3BP2P78314 561 aa7.32□□□□□ -1.24
R3HDM1-211ENST00000445855 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
R3HDM1-211ENST00000445855 CDCA8Q53HL2 280 aa7.32□□□□□ -1.24
R3HDM1-211ENST00000445855 C4orf48Q5BLP8 95 aa7.32□□□□□ -1.24
R3HDM1-211ENST00000445855 SPNS2Q8IVW8 549 aa7.32□□□□□ -1.24
R3HDM1-211ENST00000445855 TRMT44Q8IYL2 757 aaKnown RBP7.32□□□□□ -1.24
R3HDM1-211ENST00000445855 CDV3Q9UKY7 258 aaKnown RBP7.32□□□□□ -1.24
R3HDM1-211ENST00000445855 TRIM32Q13049 653 aa7.31□□□□□ -1.24
R3HDM1-211ENST00000445855 NCOA4Q13772 614 aa7.31□□□□□ -1.24
R3HDM1-211ENST00000445855 NBPF20Q3BBV1 942 aa7.31□□□□□ -1.24
R3HDM1-211ENST00000445855 RNF20Q5VTR2 975 aa7.31□□□□□ -1.24
R3HDM1-211ENST00000445855 FAM196BA6NMK8 535 aa7.3□□□□□ -1.24
R3HDM1-211ENST00000445855 ATP5J2-PTCD1G3V325 749 aa7.3□□□□□ -1.24
R3HDM1-211ENST00000445855 WNT7BP56706 349 aa7.3□□□□□ -1.24
R3HDM1-211ENST00000445855 EML3Q32P44 896 aa7.3□□□□□ -1.24
R3HDM1-211ENST00000445855 TRAF7Q6Q0C0 670 aa7.3□□□□□ -1.24
R3HDM1-211ENST00000445855 CCDC125Q86Z20 511 aa7.3□□□□□ -1.24
R3HDM1-211ENST00000445855 DEPDC4Q8N2C3 294 aa7.3□□□□□ -1.24
R3HDM1-211ENST00000445855 MKRN1Q9UHC7 482 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-211ENST00000445855 PATL2C9JE40 543 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-211ENST00000445855 GIGYF1O75420 1035 aaPredicted RBP7.29□□□□□ -1.24
R3HDM1-211ENST00000445855 RPIAP49247 311 aa7.29□□□□□ -1.24
R3HDM1-211ENST00000445855 PLA2G2CQ5R387 149 aa7.29□□□□□ -1.24
R3HDM1-211ENST00000445855 SEPT12Q8IYM1 358 aa7.29□□□□□ -1.24
R3HDM1-211ENST00000445855 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-211ENST00000445855 TMEM88BA6NKF7 163 aa7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 ESPNB1AK53 854 aa7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 BRD1O95696 1058 aa7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 VARSP26640 1264 aaKnown RBP7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 PPP1R18Q6NYC8 613 aa7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 LARP1Q6PKG0 1096 aaKnown RBP7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 TRIM50Q86XT4 487 aa7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 AEBP1Q8IUX7 1158 aa7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 CCDC85AQ96PX6 553 aaPredicted RBP7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 DOLKQ9UPQ8 538 aa7.28□□□□□ -1.24
R3HDM1-211ENST00000445855 USP17L15C9J2P7 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L10C9JJH3 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L13C9JLJ4 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L12C9JPN9 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L11C9JVI0 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L21D6R901 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L18D6R9N7 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L22D6RA61 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L17D6RBQ6 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L19D6RCP7 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L20D6RJB6 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 USP17L24Q0WX57 530 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 ZMIZ1Q9ULJ6 1067 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 NOVA2Q9UNW9 492 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 NOD1Q9Y239 953 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 MAP4K5Q9Y4K4 846 aa7.27□□□□□ -1.25
R3HDM1-211ENST00000445855 RASA1P20936 1047 aa7.26□□□□□ -1.25
R3HDM1-211ENST00000445855 ATP1A2P50993 1020 aa7.26□□□□□ -1.25
R3HDM1-211ENST00000445855 SKOR1P84550 965 aa7.26□□□□□ -1.25
R3HDM1-211ENST00000445855 KCNA1Q09470 495 aa7.26□□□□□ -1.25
R3HDM1-211ENST00000445855 CRTC2Q53ET0 693 aaPredicted RBP7.26□□□□□ -1.25
R3HDM1-211ENST00000445855 CD2BP2O95400 341 aaKnown RBP7.25□□□□□ -1.25
R3HDM1-211ENST00000445855 PTK7Q13308 1070 aa7.25□□□□□ -1.25
R3HDM1-211ENST00000445855 TSGA10IPQ3SY00 556 aa7.25□□□□□ -1.25
R3HDM1-211ENST00000445855 TMEM164Q5U3C3 297 aa7.25□□□□□ -1.25
R3HDM1-211ENST00000445855 SIRT1Q96EB6 747 aa7.25□□□□□ -1.25
R3HDM1-211ENST00000445855 OXLD1Q5BKU9 147 aa7.24□□□□□ -1.25
R3HDM1-211ENST00000445855 IFFO2Q5TF58 517 aa7.24□□□□□ -1.25
R3HDM1-211ENST00000445855 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
R3HDM1-211ENST00000445855 OGFOD1Q8N543 542 aa7.24□□□□□ -1.25
R3HDM1-211ENST00000445855 STK32AQ8WU08 396 aa7.24□□□□□ -1.25
R3HDM1-211ENST00000445855 KCTD15Q96SI1 283 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-211ENST00000445855 CARNS1A5YM72 827 aa7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 USP4Q13107 963 aa7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 VASH1Q7L8A9 365 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 ANKMY2Q8IV38 441 aa7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 LARGE2Q8N3Y3 721 aa7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 EHBP1Q8NDI1 1231 aa7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 FAM200AQ8TCP9 573 aa7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 CDCA7Q9BWT1 371 aaPredicted RBP7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 DNAAF2Q9NVR5 837 aaKnown RBP7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 PCDHB11Q9Y5F2 797 aa7.23□□□□□ -1.25
R3HDM1-211ENST00000445855 GTF2IP78347 998 aa7.22□□□□□ -1.25
R3HDM1-211ENST00000445855 CLDN10P78369 228 aa7.22□□□□□ -1.25
R3HDM1-211ENST00000445855 MPNDQ8N594 471 aa7.22□□□□□ -1.25
R3HDM1-211ENST00000445855 TRIM52Q96A61 297 aa7.22□□□□□ -1.25
R3HDM1-211ENST00000445855 CDK15Q96Q40 435 aa7.22□□□□□ -1.25
R3HDM1-211ENST00000445855 DPYDQ12882 1025 aa7.21□□□□□ -1.26
R3HDM1-211ENST00000445855 INTS6LQ5JSJ4 861 aaKnown RBP7.21□□□□□ -1.26
R3HDM1-211ENST00000445855 RC3H1Q5TC82 1133 aaKnown RBP7.21□□□□□ -1.26
R3HDM1-211ENST00000445855 SIX5Q8N196 739 aa7.21□□□□□ -1.26
R3HDM1-211ENST00000445855 ZNF594Q96JF6 807 aaPredicted RBP7.21□□□□□ -1.26
R3HDM1-211ENST00000445855 MYCP01106 439 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-211ENST00000445855 MMRN1Q13201 1228 aa7.2□□□□□ -1.26
R3HDM1-211ENST00000445855 SWI5Q1ZZU3 235 aa7.2□□□□□ -1.26
R3HDM1-211ENST00000445855 LIAT1Q6ZQX7 453 aa7.2□□□□□ -1.26
R3HDM1-211ENST00000445855 CLP1Q92989 425 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-211ENST00000445855 CCDC9Q9Y3X0 531 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-211ENST00000445855 RBM19Q9Y4C8 960 aaKnown RBP7.2□□□□□ -1.26
R3HDM1-211ENST00000445855 ZBTB7BO15156 539 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-211ENST00000445855 RAB15P59190 212 aa7.19□□□□□ -1.26
R3HDM1-211ENST00000445855 DHX9Q08211 1270 aaKnown RBP7.19□□□□□ -1.26
R3HDM1-211ENST00000445855 FAM69CQ0P6D2 419 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms