RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 CHD4Q14839 1912 aa21.58■■□□□ 1.04
UBE2F-216ENST00000445676 BRD4O60885 1362 aaPredicted RBP21.58■■□□□ 1.04
UBE2F-216ENST00000445676 SRPK2P78362 688 aaKnown RBP21.57■■□□□ 1.04
UBE2F-216ENST00000445676 DDB1Q16531 1140 aa21.57■■□□□ 1.04
UBE2F-216ENST00000445676 NBPF1Q3BBV0 1214 aa21.57■■□□□ 1.04
UBE2F-216ENST00000445676 BCL11BQ9C0K0 894 aaPredicted RBP21.56■■□□□ 1.04
UBE2F-216ENST00000445676 CABP2Q9NPB3 220 aa21.56■■□□□ 1.04
UBE2F-216ENST00000445676 BCL9O00512 1426 aa21.55■■□□□ 1.04
UBE2F-216ENST00000445676 PROM2Q8N271 834 aa21.55■■□□□ 1.04
UBE2F-216ENST00000445676 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
UBE2F-216ENST00000445676 NLRP6P59044 892 aa21.54■■□□□ 1.04
UBE2F-216ENST00000445676 TOM1L2Q6ZVM7 507 aa21.54■■□□□ 1.04
UBE2F-216ENST00000445676 MARCH10Q8NA82 808 aaPredicted RBP21.54■■□□□ 1.04
UBE2F-216ENST00000445676 CENPJQ9HC77 1338 aaPredicted RBP21.54■■□□□ 1.04
UBE2F-216ENST00000445676 PTGER2P43116 358 aa21.53■■□□□ 1.04
UBE2F-216ENST00000445676 CPSF1Q10570 1443 aaKnown RBP21.53■■□□□ 1.04
UBE2F-216ENST00000445676 WDR17Q8IZU2 1322 aa21.53■■□□□ 1.04
UBE2F-216ENST00000445676 AXIN2Q9Y2T1 843 aa21.52■■□□□ 1.04
UBE2F-216ENST00000445676 CABP1Q9NZU7 370 aa21.5■■□□□ 1.03
UBE2F-216ENST00000445676 NHSQ6T4R5 1651 aa21.5■■□□□ 1.03
UBE2F-216ENST00000445676 TRPM1Q7Z4N2 1603 aa21.48■■□□□ 1.03
UBE2F-216ENST00000445676 ZNF784Q8NCA9 323 aaPredicted RBP21.48■■□□□ 1.03
UBE2F-216ENST00000445676 ATF5Q9Y2D1 282 aaPredicted RBP21.48■■□□□ 1.03
UBE2F-216ENST00000445676 KAT6BQ8WYB5 2073 aa21.48■■□□□ 1.03
UBE2F-216ENST00000445676 TXNRD1Q16881 649 aa21.47■■□□□ 1.03
UBE2F-216ENST00000445676 CDCA7Q9BWT1 371 aaPredicted RBP21.47■■□□□ 1.03
UBE2F-216ENST00000445676 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
UBE2F-216ENST00000445676 NFAT5O94916 1531 aa21.46■■□□□ 1.03
UBE2F-216ENST00000445676 ARHGEF25Q86VW2 580 aa21.45■■□□□ 1.02
UBE2F-216ENST00000445676 CARD10Q9BWT7 1032 aa21.45■■□□□ 1.02
UBE2F-216ENST00000445676 STK32BQ9NY57 414 aa21.45■■□□□ 1.02
UBE2F-216ENST00000445676 TNS2Q63HR2 1409 aa21.45■■□□□ 1.02
UBE2F-216ENST00000445676 SLC15A2Q16348 729 aa21.44■■□□□ 1.02
UBE2F-216ENST00000445676 FHDC1Q9C0D6 1143 aaPredicted RBP21.44■■□□□ 1.02
UBE2F-216ENST00000445676 BTAF1O14981 1849 aa21.43■■□□□ 1.02
UBE2F-216ENST00000445676 SGIP1Q9BQI5 828 aa21.43■■□□□ 1.02
UBE2F-216ENST00000445676 SYT17Q9BSW7 474 aa21.43■■□□□ 1.02
UBE2F-216ENST00000445676 ABCC6O95255 1503 aa21.42■■□□□ 1.02
UBE2F-216ENST00000445676 TTC21BQ7Z4L5 1316 aa21.41■■□□□ 1.02
UBE2F-216ENST00000445676 MTFR1LQ9H019 292 aa21.41■■□□□ 1.02
UBE2F-216ENST00000445676 MON2Q7Z3U7 1717 aa21.41■■□□□ 1.02
UBE2F-216ENST00000445676 SOX12O15370 315 aa21.4■■□□□ 1.02
UBE2F-216ENST00000445676 CSB-PGBD3P0DP91 1061 aa21.4■■□□□ 1.02
UBE2F-216ENST00000445676 CCDC7Q96M83 1385 aa21.39■■□□□ 1.02
UBE2F-216ENST00000445676 LTN1O94822 1766 aa21.39■■□□□ 1.01
UBE2F-216ENST00000445676 KCNH5Q8NCM2 988 aa21.39■■□□□ 1.01
UBE2F-216ENST00000445676 USP54Q70EL1 1684 aa21.38■■□□□ 1.01
UBE2F-216ENST00000445676 EXOC5O00471 708 aa21.38■■□□□ 1.01
UBE2F-216ENST00000445676 EVC2Q86UK5 1308 aa21.37■■□□□ 1.01
UBE2F-216ENST00000445676 QSER1Q2KHR3 1735 aa21.36■■□□□ 1.01
UBE2F-216ENST00000445676 TTC21AQ8NDW8 1320 aa21.35■■□□□ 1.01
UBE2F-216ENST00000445676 TUBGCP6Q96RT7 1819 aa21.35■■□□□ 1.01
UBE2F-216ENST00000445676 ACSBG1Q96GR2 724 aa21.35■■□□□ 1.01
UBE2F-216ENST00000445676 COL24A1Q17RW2 1714 aa21.35■■□□□ 1.01
UBE2F-216ENST00000445676 MAP3K5Q99683 1374 aa21.35■■□□□ 1.01
UBE2F-216ENST00000445676 GOLGB1Q14789 3259 aaKnown RBP21.34■■□□□ 1.01
UBE2F-216ENST00000445676 ZNF692Q9BU19 519 aaPredicted RBP21.34■■□□□ 1.01
UBE2F-216ENST00000445676 ARXQ96QS3 562 aa21.33■■□□□ 1.01
UBE2F-216ENST00000445676 SENP3-EIF4A1A0A087X0R7 540 aa21.32■■□□□ 1
UBE2F-216ENST00000445676 ZNF827Q17R98 1081 aa21.31■■□□□ 1
UBE2F-216ENST00000445676 ERBB3P21860 1342 aa21.3■■□□□ 1
UBE2F-216ENST00000445676 C1QTNF8P60827 252 aa21.3■■□□□ 1
UBE2F-216ENST00000445676 KTN1Q86UP2 1357 aaKnown RBP21.3■■□□□ 1
UBE2F-216ENST00000445676 LRRC4BQ9NT99 713 aa21.28■■□□□ 1
UBE2F-216ENST00000445676 USP31Q70CQ4 1352 aa21.27■■□□□ 1
UBE2F-216ENST00000445676 IL2RBP14784 551 aa21.26■□□□□ 0.99
UBE2F-216ENST00000445676 L3MBTL2Q969R5 705 aa21.26■□□□□ 0.99
UBE2F-216ENST00000445676 NLRP2Q9NX02 1062 aa21.26■□□□□ 0.99
UBE2F-216ENST00000445676 CD163L1Q9NR16 1453 aa21.25■□□□□ 0.99
UBE2F-216ENST00000445676 SHANK3Q9BYB0 1731 aa21.24■□□□□ 0.99
UBE2F-216ENST00000445676 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
UBE2F-216ENST00000445676 LY75O60449 1722 aa21.24■□□□□ 0.99
UBE2F-216ENST00000445676 DOT1LQ8TEK3 1739 aa21.24■□□□□ 0.99
UBE2F-216ENST00000445676 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
UBE2F-216ENST00000445676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.23■□□□□ 0.99
UBE2F-216ENST00000445676 AKT1S1Q96B36 256 aa21.23■□□□□ 0.99
UBE2F-216ENST00000445676 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
UBE2F-216ENST00000445676 CEP350Q5VT06 3117 aa21.22■□□□□ 0.99
UBE2F-216ENST00000445676 GPR162Q16538 588 aa21.22■□□□□ 0.99
UBE2F-216ENST00000445676 NME9Q86XW9 330 aa21.22■□□□□ 0.99
UBE2F-216ENST00000445676 ANKRD24Q8TF21 1146 aa21.21■□□□□ 0.99
UBE2F-216ENST00000445676 PNPLA7Q6ZV29 1317 aa21.2■□□□□ 0.98
UBE2F-216ENST00000445676 RGPD2P0DJD1 1756 aa21.19■□□□□ 0.98
UBE2F-216ENST00000445676 KLHL34Q8N239 644 aa21.19■□□□□ 0.98
UBE2F-216ENST00000445676 SLC16A10Q8TF71 515 aa21.19■□□□□ 0.98
UBE2F-216ENST00000445676 SLC27A3Q5K4L6 730 aa21.17■□□□□ 0.98
UBE2F-216ENST00000445676 GIGYF1O75420 1035 aaPredicted RBP21.16■□□□□ 0.98
UBE2F-216ENST00000445676 POLD1P28340 1107 aa21.16■□□□□ 0.98
UBE2F-216ENST00000445676 NLGN2Q8NFZ4 835 aa21.16■□□□□ 0.98
UBE2F-216ENST00000445676 EDC4Q6P2E9 1401 aaKnown RBP21.15■□□□□ 0.98
UBE2F-216ENST00000445676 KCNQ4P56696 695 aa21.15■□□□□ 0.98
UBE2F-216ENST00000445676 PELP1Q8IZL8 1130 aaKnown RBP21.15■□□□□ 0.98
UBE2F-216ENST00000445676 NSD2O96028 1365 aa21.13■□□□□ 0.97
UBE2F-216ENST00000445676 DDX54Q8TDD1 881 aaKnown RBP21.13■□□□□ 0.97
UBE2F-216ENST00000445676 SIN3AQ96ST3 1273 aa21.13■□□□□ 0.97
UBE2F-216ENST00000445676 TFCP2L1Q9NZI6 479 aa21.12■□□□□ 0.97
UBE2F-216ENST00000445676 ANKRD36BQ8N2N9 1353 aa21.11■□□□□ 0.97
UBE2F-216ENST00000445676 A0A1W2PP64 1363 aa21.1■□□□□ 0.97
UBE2F-216ENST00000445676 IP6K1Q92551 441 aa21.1■□□□□ 0.97
UBE2F-216ENST00000445676 YBX3P16989 372 aaKnown RBP eCLIP21.09■□□□□ 0.971e-6■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms